RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 TEX38Q6PEX7 206 aa12.65□□□□□ -0.38
FNDC1-201ENST00000297267 A0A087WWC5 75 aa12.65□□□□□ -0.38
FNDC1-201ENST00000297267 SPRY2O43597 315 aa12.65□□□□□ -0.38
FNDC1-201ENST00000297267 PI4KAP42356 2102 aa12.65□□□□□ -0.38
FNDC1-201ENST00000297267 A0A1W2PRE2 83 aa12.65□□□□□ -0.39
FNDC1-201ENST00000297267 C8orf46Q8TAG6 207 aa12.64□□□□□ -0.39
FNDC1-201ENST00000297267 DEFB121Q5J5C9 76 aa12.64□□□□□ -0.39
FNDC1-201ENST00000297267 C14orf178Q8N769 122 aaPredicted RBP12.64□□□□□ -0.39
FNDC1-201ENST00000297267 PRCDQ00LT1 54 aa12.64□□□□□ -0.39
FNDC1-201ENST00000297267 C1orf162Q8NEQ5 155 aaPredicted RBP12.64□□□□□ -0.39
FNDC1-201ENST00000297267 DPM2O94777 84 aa12.64□□□□□ -0.39
FNDC1-201ENST00000297267 IFI27P40305 119 aaPredicted RBP12.64□□□□□ -0.39
FNDC1-201ENST00000297267 NEU4Q8WWR8 484 aaPredicted RBP12.64□□□□□ -0.39
FNDC1-201ENST00000297267 UBE2CO00762 179 aa12.63□□□□□ -0.39
FNDC1-201ENST00000297267 LRRK1Q38SD2 2015 aa12.63□□□□□ -0.39
FNDC1-201ENST00000297267 C9JQL5 133 aa12.63□□□□□ -0.39
FNDC1-201ENST00000297267 NUTF2P61970 127 aaKnown RBP12.63□□□□□ -0.39
FNDC1-201ENST00000297267 Q6ZRM9 215 aa12.63□□□□□ -0.39
FNDC1-201ENST00000297267 CACNA1DQ01668 2161 aa12.63□□□□□ -0.39
FNDC1-201ENST00000297267 ADARB2-AS1A8MUL3 147 aa12.63□□□□□ -0.39
FNDC1-201ENST00000297267 SRSF1Q07955 248 aaKnown RBP eCLIP12.63□□□□□ -0.39
FNDC1-201ENST00000297267 GAFA1Q96PS6 74 aa12.63□□□□□ -0.39
FNDC1-201ENST00000297267 CHCHD5Q9BSY4 110 aa12.63□□□□□ -0.39
FNDC1-201ENST00000297267 RTTNQ86VV8 2226 aa12.63□□□□□ -0.39
FNDC1-201ENST00000297267 ZNF318Q5VUA4 2279 aa12.63□□□□□ -0.39
FNDC1-201ENST00000297267 CYYR1Q96J86 154 aa12.63□□□□□ -0.39
FNDC1-201ENST00000297267 ATP5LO75964 103 aa12.63□□□□□ -0.39
FNDC1-201ENST00000297267 CCL1P22362 96 aa12.63□□□□□ -0.39
FNDC1-201ENST00000297267 NEGR1Q7Z3B1 354 aa12.63□□□□□ -0.39
FNDC1-201ENST00000297267 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.63□□□□□ -0.39
FNDC1-201ENST00000297267 IGHV1-8P0DP01 117 aa12.62□□□□□ -0.39
FNDC1-201ENST00000297267 GUSBP1Q15486 140 aa12.62□□□□□ -0.39
FNDC1-201ENST00000297267 STPG4Q8N801 248 aa12.62□□□□□ -0.39
FNDC1-201ENST00000297267 KLK9Q9UKQ9 250 aa12.62□□□□□ -0.39
FNDC1-201ENST00000297267 ZFP36L1Q07352 338 aaKnown RBP12.62□□□□□ -0.39
FNDC1-201ENST00000297267 RPP25LQ8N5L8 163 aaKnown RBP12.62□□□□□ -0.39
FNDC1-201ENST00000297267 RNASE6Q93091 150 aaKnown RBP12.62□□□□□ -0.39
FNDC1-201ENST00000297267 AGMATQ9BSE5 352 aa12.62□□□□□ -0.39
FNDC1-201ENST00000297267 IGKV1D-17A0A075B6S4 117 aa12.62□□□□□ -0.39
FNDC1-201ENST00000297267 DKK1O94907 266 aa12.62□□□□□ -0.39
FNDC1-201ENST00000297267 AMN1Q8IY45 258 aa12.62□□□□□ -0.39
FNDC1-201ENST00000297267 A0A096LPF7 62 aa12.62□□□□□ -0.39
FNDC1-201ENST00000297267 TRGV1A0A0A0MS02 117 aa12.62□□□□□ -0.39
FNDC1-201ENST00000297267 CA7P43166 264 aa12.62□□□□□ -0.39
FNDC1-201ENST00000297267 SAMD5Q5TGI4 173 aa12.62□□□□□ -0.39
FNDC1-201ENST00000297267 RCHY1Q96PM5 261 aa12.61□□□□□ -0.39
FNDC1-201ENST00000297267 TRAV8-4A0A0B4J246 113 aa12.61□□□□□ -0.39
FNDC1-201ENST00000297267 H3BUX3 64 aa12.61□□□□□ -0.39
FNDC1-201ENST00000297267 SSBP2P81877 361 aaPredicted RBP12.61□□□□□ -0.39
FNDC1-201ENST00000297267 TRAV41A0A0B4J266 112 aa12.61□□□□□ -0.39
FNDC1-201ENST00000297267 OR9G4Q8NGQ1 327 aa12.61□□□□□ -0.39
FNDC1-201ENST00000297267 HEATR1Q9H583 2144 aaKnown RBP12.61□□□□□ -0.39
FNDC1-201ENST00000297267 DOCK8Q8NF50 2099 aa12.61□□□□□ -0.39
FNDC1-201ENST00000297267 H3BRM9 83 aa12.6□□□□□ -0.39
FNDC1-201ENST00000297267 A0A0G2JLM5 398 aa12.6□□□□□ -0.39
FNDC1-201ENST00000297267 TMEM213A2RRL7 107 aa12.6□□□□□ -0.39
FNDC1-201ENST00000297267 SRRM4A7MD48 611 aaKnown RBP12.6□□□□□ -0.39
FNDC1-201ENST00000297267 H0YJW9 148 aa12.6□□□□□ -0.39
FNDC1-201ENST00000297267 TMEM178BH3BS89 294 aa12.6□□□□□ -0.39
FNDC1-201ENST00000297267 TDGF1P3P51864 188 aa12.6□□□□□ -0.39
FNDC1-201ENST00000297267 ID3Q02535 119 aa12.6□□□□□ -0.39
FNDC1-201ENST00000297267 RNASE13Q5GAN3 156 aaKnown RBP12.6□□□□□ -0.39
FNDC1-201ENST00000297267 TPRP12270 2363 aaKnown RBP12.6□□□□□ -0.39
FNDC1-201ENST00000297267 IGHV3-38A0A0C4DH36 116 aa12.6□□□□□ -0.39
FNDC1-201ENST00000297267 ZNF503-AS2A6NEH8 195 aa12.6□□□□□ -0.39
FNDC1-201ENST00000297267 FGF16O43320 207 aa12.6□□□□□ -0.39
FNDC1-201ENST00000297267 Q6P435 159 aa12.6□□□□□ -0.39
FNDC1-201ENST00000297267 ASCL4Q6XD76 172 aa12.6□□□□□ -0.39
FNDC1-201ENST00000297267 ICE1Q9Y2F5 2266 aa12.6□□□□□ -0.39
FNDC1-201ENST00000297267 TRAV12-2A0A075B6T6 113 aa12.59□□□□□ -0.39
FNDC1-201ENST00000297267 TRAV9-2A0A087WT02 112 aa12.59□□□□□ -0.39
FNDC1-201ENST00000297267 HIST1H4AP62805 103 aaKnown RBP12.59□□□□□ -0.39
FNDC1-201ENST00000297267 DIAPH2-AS1Q14236 149 aa12.59□□□□□ -0.39
FNDC1-201ENST00000297267 LAGE3Q14657 143 aa12.59□□□□□ -0.39
FNDC1-201ENST00000297267 ZNF876PQ49A33 203 aa12.59□□□□□ -0.39
FNDC1-201ENST00000297267 IFI27L1Q96BM0 104 aa12.59□□□□□ -0.39
FNDC1-201ENST00000297267 PEMTQ9UBM1 199 aa12.59□□□□□ -0.39
FNDC1-201ENST00000297267 PLXNA3P51805 1871 aa12.59□□□□□ -0.39
FNDC1-201ENST00000297267 DIDO1Q9BTC0 2240 aaKnown RBP12.59□□□□□ -0.39
FNDC1-201ENST00000297267 CD5P06127 495 aa12.59□□□□□ -0.39
FNDC1-201ENST00000297267 LURAP1LQ8IV03 231 aa12.59□□□□□ -0.39
FNDC1-201ENST00000297267 SPXQ9BT56 116 aa12.59□□□□□ -0.39
FNDC1-201ENST00000297267 IGLV3-12A0A075B6K2 115 aa12.59□□□□□ -0.39
FNDC1-201ENST00000297267 CFHR2P36980 270 aa12.59□□□□□ -0.39
FNDC1-201ENST00000297267 CRIPAKQ8N1N5 446 aa12.59□□□□□ -0.39
FNDC1-201ENST00000297267 CITED2Q99967 270 aaPredicted RBP12.59□□□□□ -0.39
FNDC1-201ENST00000297267 CSTL1Q9H114 145 aa12.59□□□□□ -0.39
FNDC1-201ENST00000297267 GNB1LQ9BYB4 327 aa12.58□□□□□ -0.4
FNDC1-201ENST00000297267 TSC2P49815 1807 aa12.58□□□□□ -0.4
FNDC1-201ENST00000297267 TRAV13-1A0A0B4J241 112 aa12.58□□□□□ -0.4
FNDC1-201ENST00000297267 LINC00271P0C7V0 271 aa12.58□□□□□ -0.4
FNDC1-201ENST00000297267 TPTE2P1Q5T6R2 138 aa12.58□□□□□ -0.4
FNDC1-201ENST00000297267 CYSLTR1Q9Y271 337 aa12.58□□□□□ -0.4
FNDC1-201ENST00000297267 TSKUQ8WUA8 353 aa12.58□□□□□ -0.4
FNDC1-201ENST00000297267 ORAOV1Q8WV07 137 aa12.58□□□□□ -0.4
FNDC1-201ENST00000297267 H7C1H1 209 aa12.58□□□□□ -0.4
FNDC1-201ENST00000297267 TMEM158Q8WZ71 300 aa12.58□□□□□ -0.4
FNDC1-201ENST00000297267 RP1L1Q8IWN7 2480 aaPredicted RBP12.58□□□□□ -0.4
FNDC1-201ENST00000297267 WIPF3A6NGB9 483 aa12.58□□□□□ -0.4
FNDC1-201ENST00000297267 IGLV3-19P01714 112 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms