RNA–Protein interactions for RNA: ENST00000293861.7

SNRNP25-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNRNP25, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-201ENST00000293861 HNF1AP20823 631 aa16.84■□□□□ 0.29
SNRNP25-201ENST00000293861 CNN1P51911 297 aaKnown RBP16.84■□□□□ 0.29
SNRNP25-201ENST00000293861 RANP62826 216 aaKnown RBP16.84■□□□□ 0.29
SNRNP25-201ENST00000293861 Q56UQ5 140 aa16.84■□□□□ 0.29
SNRNP25-201ENST00000293861 LEMD1Q68G75 181 aa16.84■□□□□ 0.29
SNRNP25-201ENST00000293861 S100A7AQ86SG5 101 aa16.84■□□□□ 0.29
SNRNP25-201ENST00000293861 TMEM190Q8WZ59 177 aa16.84■□□□□ 0.29
SNRNP25-201ENST00000293861 FBXL7Q9UJT9 491 aa16.84■□□□□ 0.29
SNRNP25-201ENST00000293861 A0A1W2PPQ1 181 aa16.83■□□□□ 0.28
SNRNP25-201ENST00000293861 J3QLI3 93 aa16.83■□□□□ 0.28
SNRNP25-201ENST00000293861 PHOX2AO14813 284 aa16.83■□□□□ 0.28
SNRNP25-201ENST00000293861 GCGP01275 180 aa16.83■□□□□ 0.28
SNRNP25-201ENST00000293861 IL4P05112 153 aa16.83■□□□□ 0.28
SNRNP25-201ENST00000293861 HIST1H1EP10412 219 aaKnown RBP16.83■□□□□ 0.28
SNRNP25-201ENST00000293861 BLNKQ8WV28 456 aa16.83■□□□□ 0.28
SNRNP25-201ENST00000293861 S4R3C0 116 aa16.83■□□□□ 0.28
SNRNP25-201ENST00000293861 TRBV9A0A0B4J1U6 114 aa16.82■□□□□ 0.28
SNRNP25-201ENST00000293861 PPP5D1E7EU14 171 aa16.82■□□□□ 0.28
SNRNP25-201ENST00000293861 EPDR1Q9UM22 224 aa16.82■□□□□ 0.28
SNRNP25-201ENST00000293861 RNF24Q9Y225 148 aa16.82■□□□□ 0.28
SNRNP25-201ENST00000293861 CRIP2P52943 208 aaPredicted RBP16.82■□□□□ 0.28
SNRNP25-201ENST00000293861 ECSCRQ19T08 205 aa16.82■□□□□ 0.28
SNRNP25-201ENST00000293861 ANKRD17O75179 2603 aaKnown RBP16.82■□□□□ 0.28
SNRNP25-201ENST00000293861 PGPA6NDG6 321 aa16.81■□□□□ 0.28
SNRNP25-201ENST00000293861 FAM3BP58499 235 aaPredicted RBP16.81■□□□□ 0.28
SNRNP25-201ENST00000293861 TMEM219Q86XT9 240 aa16.81■□□□□ 0.28
SNRNP25-201ENST00000293861 C5orf17Q8NAS9 161 aa16.81■□□□□ 0.28
SNRNP25-201ENST00000293861 OSTCQ9NRP0 149 aa16.81■□□□□ 0.28
SNRNP25-201ENST00000293861 TRAV9-1A0A075B6T8 112 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 HIST1H2BKO60814 126 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 AVPP01185 164 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 AMY1AP04745 511 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 HIST1H2BJP06899 126 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 CTSGP08311 255 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 HIST1H2BOP23527 126 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 HIST1H2BBP33778 126 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 HIST1H2BDP58876 126 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 HIST1H2BCP62807 126 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 HIST2H2BEQ16778 126 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 BPIFA4PQ86YQ2 179 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 HIST1H2BHQ93079 126 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 HIST1H2BNQ99877 126 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 HIST1H2BMQ99879 126 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 ZNF586Q9NXT0 402 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 IL36BQ9NZH7 164 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 KLF12Q9Y4X4 402 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.8■□□□□ 0.289e-7■■■■■ 54.6
SNRNP25-201ENST00000293861 CRYBG3Q68DQ2 2970 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 ISLRO14498 428 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 SLC25A5P05141 298 aaKnown RBP16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 PLA2G2AP14555 144 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 USF2Q15853 346 aaPredicted RBP16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 TMEM183BQ1AE95 376 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 Q9H3A6 140 aa16.8■□□□□ 0.28
SNRNP25-201ENST00000293861 FBN2P35556 2912 aa16.79■□□□□ 0.28
SNRNP25-201ENST00000293861 LINC01548A6NM66 108 aa16.79■□□□□ 0.28
SNRNP25-201ENST00000293861 ERVFC1-1P60608 527 aa16.79■□□□□ 0.28
SNRNP25-201ENST00000293861 FABP9Q0Z7S8 132 aa16.79■□□□□ 0.28
SNRNP25-201ENST00000293861 OR5I1Q13606 314 aa16.79■□□□□ 0.28
SNRNP25-201ENST00000293861 C19orf54Q5BKX5 351 aa16.79■□□□□ 0.28
SNRNP25-201ENST00000293861 ZNF502Q8TBZ5 544 aa16.79■□□□□ 0.28
SNRNP25-201ENST00000293861 FRZBQ92765 325 aa16.79■□□□□ 0.28
SNRNP25-201ENST00000293861 OTORQ9NRC9 128 aa16.79■□□□□ 0.28
SNRNP25-201ENST00000293861 V9GYV3 84 aa16.79■□□□□ 0.28
SNRNP25-201ENST00000293861 USP9YO00507 2555 aaPredicted RBP16.79■□□□□ 0.28
SNRNP25-201ENST00000293861 A6NDX4 124 aa16.78■□□□□ 0.28
SNRNP25-201ENST00000293861 J3QKU1 62 aa16.78■□□□□ 0.28
SNRNP25-201ENST00000293861 MRPS12O15235 138 aaKnown RBP16.78■□□□□ 0.28
SNRNP25-201ENST00000293861 S100A9P06702 114 aaKnown RBP16.78■□□□□ 0.28
SNRNP25-201ENST00000293861 SNRPCP09234 159 aaKnown RBP16.78■□□□□ 0.28
SNRNP25-201ENST00000293861 SMIM12Q96EX1 92 aa16.78■□□□□ 0.28
SNRNP25-201ENST00000293861 LINC00479Q96M42 142 aa16.78■□□□□ 0.28
SNRNP25-201ENST00000293861 ATG101Q9BSB4 218 aa16.78■□□□□ 0.28
SNRNP25-201ENST00000293861 ZNF98A6NK75 572 aa16.78■□□□□ 0.28
SNRNP25-201ENST00000293861 TRGC1P0CF51 173 aa16.78■□□□□ 0.28
SNRNP25-201ENST00000293861 IGLC2P0DOY2 106 aa16.78■□□□□ 0.28
SNRNP25-201ENST00000293861 C15orf32Q32M92 178 aa16.78■□□□□ 0.28
SNRNP25-201ENST00000293861 MBD6Q96DN6 1003 aa16.78■□□□□ 0.28
SNRNP25-201ENST00000293861 GAR1Q9NY12 217 aaKnown RBP16.78■□□□□ 0.28
SNRNP25-201ENST00000293861 OR2T8A6NH00 312 aa16.77■□□□□ 0.28
SNRNP25-201ENST00000293861 RNF223E7ERA6 249 aa16.77■□□□□ 0.28
SNRNP25-201ENST00000293861 G3V318 75 aa16.77■□□□□ 0.28
SNRNP25-201ENST00000293861 H3BUX3 64 aa16.77■□□□□ 0.28
SNRNP25-201ENST00000293861 M0QZK8 103 aa16.77■□□□□ 0.28
SNRNP25-201ENST00000293861 GNG5P63218 68 aa16.77■□□□□ 0.28
SNRNP25-201ENST00000293861 RHOGP84095 191 aa16.77■□□□□ 0.28
SNRNP25-201ENST00000293861 Q5PR19 223 aa16.77■□□□□ 0.28
SNRNP25-201ENST00000293861 OR4F17Q8NGA8 305 aa16.77■□□□□ 0.28
SNRNP25-201ENST00000293861 PITPNC1Q9UKF7 332 aa16.77■□□□□ 0.28
SNRNP25-201ENST00000293861 SH2D7A6NKC9 451 aaPredicted RBP16.76■□□□□ 0.27
SNRNP25-201ENST00000293861 IGHV3-23P01764 117 aa16.76■□□□□ 0.27
SNRNP25-201ENST00000293861 SOX21Q9Y651 276 aaPredicted RBP16.76■□□□□ 0.27
SNRNP25-201ENST00000293861 TRBV19A0A075B6N1 114 aa16.76■□□□□ 0.27
SNRNP25-201ENST00000293861 TGFAP01135 160 aa16.76■□□□□ 0.27
SNRNP25-201ENST00000293861 HOXA5P20719 270 aa16.76■□□□□ 0.27
SNRNP25-201ENST00000293861 ADMP35318 185 aa16.76■□□□□ 0.27
SNRNP25-201ENST00000293861 AKR1D1P51857 326 aa16.76■□□□□ 0.27
SNRNP25-201ENST00000293861 BAGE2Q86Y30 109 aa16.76■□□□□ 0.27
SNRNP25-201ENST00000293861 LYPD1Q8N2G4 141 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms