RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 PRSS57Q6UWY2 283 aa12.9□□□□□ -0.34
MAP1LC3B-201ENST00000268607 WIPF2Q8TF74 440 aaPredicted RBP12.9□□□□□ -0.34
MAP1LC3B-201ENST00000268607 H0Y8G0 127 aa12.89□□□□□ -0.35
MAP1LC3B-201ENST00000268607 CRXO43186 299 aaPredicted RBP12.89□□□□□ -0.35
MAP1LC3B-201ENST00000268607 GPR183P32249 361 aa12.89□□□□□ -0.35
MAP1LC3B-201ENST00000268607 CCL8P80075 99 aa12.89□□□□□ -0.35
MAP1LC3B-201ENST00000268607 HIST1H1AQ02539 215 aaPredicted RBP12.89□□□□□ -0.35
MAP1LC3B-201ENST00000268607 GTF2H5Q6ZYL4 71 aa12.89□□□□□ -0.35
MAP1LC3B-201ENST00000268607 TNFAIP6P98066 277 aaPredicted RBP12.89□□□□□ -0.35
MAP1LC3B-201ENST00000268607 JMJD8Q96S16 334 aa12.89□□□□□ -0.35
MAP1LC3B-201ENST00000268607 MGST3O14880 152 aa12.88□□□□□ -0.35
MAP1LC3B-201ENST00000268607 IGHV1-46P01743 117 aa12.88□□□□□ -0.35
MAP1LC3B-201ENST00000268607 GNLYP22749 145 aa12.88□□□□□ -0.35
MAP1LC3B-201ENST00000268607 CD24P25063 80 aa12.88□□□□□ -0.35
MAP1LC3B-201ENST00000268607 C1orf229Q6ZS94 237 aaPredicted RBP12.88□□□□□ -0.35
MAP1LC3B-201ENST00000268607 CCL13Q99616 98 aa12.88□□□□□ -0.35
MAP1LC3B-201ENST00000268607 PMCHL2Q9BQD1 86 aa12.88□□□□□ -0.35
MAP1LC3B-201ENST00000268607 CELSR1Q9NYQ6 3014 aa12.88□□□□□ -0.35
MAP1LC3B-201ENST00000268607 IGLV3-9A0A075B6K5 115 aa12.88□□□□□ -0.35
MAP1LC3B-201ENST00000268607 IGKV1OR2-108A0A075B7D4 117 aa12.88□□□□□ -0.35
MAP1LC3B-201ENST00000268607 PLAUP00749 431 aa12.88□□□□□ -0.35
MAP1LC3B-201ENST00000268607 FAM90A1Q86YD7 464 aa12.88□□□□□ -0.35
MAP1LC3B-201ENST00000268607 S1PR3Q99500 378 aa12.88□□□□□ -0.35
MAP1LC3B-201ENST00000268607 LHBP01229 141 aa12.87□□□□□ -0.35
MAP1LC3B-201ENST00000268607 APOA2P02652 100 aa12.87□□□□□ -0.35
MAP1LC3B-201ENST00000268607 TRAT1Q6PIZ9 186 aa12.87□□□□□ -0.35
MAP1LC3B-201ENST00000268607 NEGR1Q7Z3B1 354 aa12.87□□□□□ -0.35
MAP1LC3B-201ENST00000268607 GTSF1LQ9H1H1 148 aa12.87□□□□□ -0.35
MAP1LC3B-201ENST00000268607 OR51B2Q9Y5P1 312 aa12.87□□□□□ -0.35
MAP1LC3B-201ENST00000268607 H3BUT2 72 aa12.87□□□□□ -0.35
MAP1LC3B-201ENST00000268607 ADH4P08319 380 aa12.87□□□□□ -0.35
MAP1LC3B-201ENST00000268607 FOXA3P55318 350 aaPredicted RBP12.87□□□□□ -0.35
MAP1LC3B-201ENST00000268607 RASL11AQ6T310 242 aa12.87□□□□□ -0.35
MAP1LC3B-201ENST00000268607 FAM216BQ8N7L0 139 aa12.87□□□□□ -0.35
MAP1LC3B-201ENST00000268607 MBD6Q96DN6 1003 aa12.87□□□□□ -0.35
MAP1LC3B-201ENST00000268607 AP1S3Q96PC3 154 aa12.87□□□□□ -0.35
MAP1LC3B-201ENST00000268607 ENY2Q9NPA8 101 aa12.87□□□□□ -0.35
MAP1LC3B-201ENST00000268607 DYSFO75923 2080 aa12.87□□□□□ -0.35
MAP1LC3B-201ENST00000268607 C15orf61A6NNL5 157 aa12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 AZU1P20160 251 aa12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 LOXL3P58215 753 aa12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 SMAGPQ0VAQ4 97 aa12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 OR4A5Q8NH83 315 aa12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 PPP1R35Q8TAP8 253 aa12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 CALYQ9NYX4 217 aa12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 ARFGEF3Q5TH69 2177 aa12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 TRAV5A0A0B4J249 113 aa12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 HIGD1CA8MV81 97 aa12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 VWC2LB2RUY7 222 aa12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 LEPROTL1O95214 131 aa12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 MORN5Q5VZ52 161 aa12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 BBC3Q96PG8 261 aaPredicted RBP12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 JKAMPQ9P055 326 aa12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 RNF7Q9UBF6 113 aa12.86□□□□□ -0.35
MAP1LC3B-201ENST00000268607 IGHV1-24A0A0C4DH33 117 aa12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 A0A1W2PRE2 83 aa12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 HLA-DRB1P01911 266 aa12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 HTR1DP28221 377 aa12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 CFHR2P36980 270 aa12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 MLANAQ16655 118 aa12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 C2orf91Q6ZV80 131 aa12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 SSX8Q7RTT4 187 aa12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 GRAMD2BQ96HH9 432 aa12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 TMEM191AQ9H0A3 160 aa12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 ZNRD1Q9P1U0 126 aa12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 POLQO75417 2590 aa12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 OR2J3O76001 311 aa12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 HSPE1P61604 102 aaKnown RBP12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 TNCP24821 2201 aa12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 TAS2R45P59539 299 aa12.85□□□□□ -0.35
MAP1LC3B-201ENST00000268607 REG1BP48304 166 aa12.84□□□□□ -0.35
MAP1LC3B-201ENST00000268607 PLP1P60201 277 aa12.84□□□□□ -0.35
MAP1LC3B-201ENST00000268607 C17orf58Q2M2W7 97 aa12.84□□□□□ -0.35
MAP1LC3B-201ENST00000268607 TMEM97Q5BJF2 176 aa12.84□□□□□ -0.35
MAP1LC3B-201ENST00000268607 IFI27L2Q9H2X8 130 aa12.84□□□□□ -0.35
MAP1LC3B-201ENST00000268607 PPIAL4EA0A075B759 164 aa12.84□□□□□ -0.35
MAP1LC3B-201ENST00000268607 PPIAL4CA0A0B4J2A2 164 aa12.84□□□□□ -0.35
MAP1LC3B-201ENST00000268607 C9orf118A6NHY6 69 aa12.84□□□□□ -0.35
MAP1LC3B-201ENST00000268607 K7EP34 96 aa12.84□□□□□ -0.35
MAP1LC3B-201ENST00000268607 PPIAL4FP0DN26 164 aa12.84□□□□□ -0.35
MAP1LC3B-201ENST00000268607 UBE2L3P68036 154 aaKnown RBP12.84□□□□□ -0.35
MAP1LC3B-201ENST00000268607 OR9G1Q8NH87 305 aa12.84□□□□□ -0.35
MAP1LC3B-201ENST00000268607 SLC25A33Q9BSK2 321 aa12.84□□□□□ -0.35
MAP1LC3B-201ENST00000268607 C1RLQ9NZP8 487 aa12.84□□□□□ -0.35
MAP1LC3B-201ENST00000268607 AMMECR1Q9Y4X0 333 aaPredicted RBP12.84□□□□□ -0.35
MAP1LC3B-201ENST00000268607 C8orf88P0DMB2 117 aa12.83□□□□□ -0.36
MAP1LC3B-201ENST00000268607 CT45A1Q5HYN5 189 aa12.83□□□□□ -0.36
MAP1LC3B-201ENST00000268607 OR2K2Q8NGT1 345 aa12.83□□□□□ -0.36
MAP1LC3B-201ENST00000268607 CT45A3Q8NHU0 189 aa12.83□□□□□ -0.36
MAP1LC3B-201ENST00000268607 SGK494Q96LW2 274 aa12.83□□□□□ -0.36
MAP1LC3B-201ENST00000268607 TMEM14BQ9NUH8 114 aa12.83□□□□□ -0.36
MAP1LC3B-201ENST00000268607 JPT1Q9UK76 154 aa12.83□□□□□ -0.36
MAP1LC3B-201ENST00000268607 TIMM8BQ9Y5J9 83 aaPredicted RBP12.83□□□□□ -0.36
MAP1LC3B-201ENST00000268607 RAI1Q7Z5J4 1906 aaPredicted RBP12.83□□□□□ -0.36
MAP1LC3B-201ENST00000268607 SEC11AP67812 179 aa12.83□□□□□ -0.36
MAP1LC3B-201ENST00000268607 BPIFA4PQ86YQ2 179 aa12.83□□□□□ -0.36
MAP1LC3B-201ENST00000268607 DSCAML1Q8TD84 2053 aa12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 PYYP10082 97 aa12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 HIST1H1EP10412 219 aaKnown RBP12.82□□□□□ -0.36
MAP1LC3B-201ENST00000268607 RPL24P83731 157 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms