RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 Q6YL49 198 aa9.01□□□□□ -0.97
SCAF11-201ENST00000266589 C11orf52Q96A22 123 aa9.01□□□□□ -0.97
SCAF11-201ENST00000266589 EEF1AKMT3Q96AZ1 226 aa9.01□□□□□ -0.97
SCAF11-201ENST00000266589 CCDC140Q96MF4 163 aa9.01□□□□□ -0.97
SCAF11-201ENST00000266589 FOXC2Q99958 501 aa9.01□□□□□ -0.97
SCAF11-201ENST00000266589 ITPR3Q14573 2671 aa9.01□□□□□ -0.97
SCAF11-201ENST00000266589 CREBBPQ92793 2442 aa9□□□□□ -0.97
SCAF11-201ENST00000266589 A0A087WWC5 75 aa9□□□□□ -0.97
SCAF11-201ENST00000266589 H3BRN7 92 aa9□□□□□ -0.97
SCAF11-201ENST00000266589 AP4M1O00189 453 aa9□□□□□ -0.97
SCAF11-201ENST00000266589 CLEC3BP05452 202 aa9□□□□□ -0.97
SCAF11-201ENST00000266589 RPL23P62829 140 aaKnown RBP9□□□□□ -0.97
SCAF11-201ENST00000266589 SUMO1P63165 101 aaKnown RBP9□□□□□ -0.97
SCAF11-201ENST00000266589 BLNKQ8WV28 456 aa9□□□□□ -0.97
SCAF11-201ENST00000266589 ISOC2Q96AB3 205 aa9□□□□□ -0.97
SCAF11-201ENST00000266589 SHANK2-AS3Q9BTD1 123 aa9□□□□□ -0.97
SCAF11-201ENST00000266589 FAM223BA6NKX1 122 aa9□□□□□ -0.97
SCAF11-201ENST00000266589 TRGV3P03979 118 aa9□□□□□ -0.97
SCAF11-201ENST00000266589 CRYBB3P26998 211 aa9□□□□□ -0.97
SCAF11-201ENST00000266589 ATP5G2Q06055 141 aa9□□□□□ -0.97
SCAF11-201ENST00000266589 CLEC19AQ6UXS0 136 aa9□□□□□ -0.97
SCAF11-201ENST00000266589 FAM223AQ8IWN6 122 aa9□□□□□ -0.97
SCAF11-201ENST00000266589 VPREB3Q9UKI3 123 aa9□□□□□ -0.97
SCAF11-201ENST00000266589 TEX15Q9BXT5 2789 aa8.99□□□□□ -0.97
SCAF11-201ENST00000266589 TRBV7-1A0A0A6YYK4 115 aa8.99□□□□□ -0.97
SCAF11-201ENST00000266589 NBEAP1P0C6P0 100 aa8.99□□□□□ -0.97
SCAF11-201ENST00000266589 PPIFP30405 207 aaKnown RBP8.99□□□□□ -0.97
SCAF11-201ENST00000266589 TPPP2P59282 170 aa8.99□□□□□ -0.97
SCAF11-201ENST00000266589 ZNF600Q6ZNG1 722 aa8.99□□□□□ -0.97
SCAF11-201ENST00000266589 TUBA4BQ9H853 241 aa8.99□□□□□ -0.97
SCAF11-201ENST00000266589 GNB4Q9HAV0 340 aa8.99□□□□□ -0.97
SCAF11-201ENST00000266589 GAR1Q9NY12 217 aaKnown RBP8.99□□□□□ -0.97
SCAF11-201ENST00000266589 TRBV20OR9-2A0A075B6H5 130 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 IGHV3-35A0A0C4DH35 117 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 RANP62826 216 aaKnown RBP8.98□□□□□ -0.97
SCAF11-201ENST00000266589 RNF212Q495C1 297 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 ZNF343Q6P1L6 599 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 IL17RELQ6ZVW7 336 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 C15orf54Q8N8G6 183 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 ELOVL1Q9BW60 279 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 TMEM14CQ9P0S9 112 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 PGPEP1LA6NFU8 196 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 ZNF98A6NK75 572 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 COLCA2A8K830 154 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 H3BTX0 84 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 H3BUA1 57 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 HOXA3O43365 443 aaPredicted RBP8.98□□□□□ -0.97
SCAF11-201ENST00000266589 RPL35P42766 123 aaKnown RBP8.98□□□□□ -0.97
SCAF11-201ENST00000266589 TMEM95Q3KNT9 176 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 S100A7AQ86SG5 101 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 LINC01551Q86U37 167 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 ZNF329Q86UD4 541 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 BPIFA4PQ86YQ2 179 aa8.98□□□□□ -0.97
SCAF11-201ENST00000266589 AURKAIP1Q9NWT8 199 aaPredicted RBP8.98□□□□□ -0.97
SCAF11-201ENST00000266589 ZNF469Q96JG9 3925 aaPredicted RBP8.98□□□□□ -0.97
SCAF11-201ENST00000266589 UNC79Q9P2D8 2635 aa8.97□□□□□ -0.97
SCAF11-201ENST00000266589 TGOLN2O43493 480 aa8.97□□□□□ -0.97
SCAF11-201ENST00000266589 ZNF414Q96IQ9 312 aa8.97□□□□□ -0.97
SCAF11-201ENST00000266589 PRDM13Q9H4Q3 707 aa8.97□□□□□ -0.97
SCAF11-201ENST00000266589 RABAC1Q9UI14 185 aa8.97□□□□□ -0.97
SCAF11-201ENST00000266589 IGHV3OR16-8A0A075B7F1 116 aa8.96□□□□□ -0.97
SCAF11-201ENST00000266589 HELTA6NFD8 242 aa8.96□□□□□ -0.97
SCAF11-201ENST00000266589 BMPR1BO00238 502 aa8.96□□□□□ -0.97
SCAF11-201ENST00000266589 BRI3O95415 125 aa8.96□□□□□ -0.97
SCAF11-201ENST00000266589 HIST1H1EP10412 219 aaKnown RBP8.96□□□□□ -0.97
SCAF11-201ENST00000266589 PF4V1P10720 104 aa8.96□□□□□ -0.97
SCAF11-201ENST00000266589 MYCNOSP40205 109 aa8.96□□□□□ -0.97
SCAF11-201ENST00000266589 CFHR3Q02985 330 aa8.96□□□□□ -0.97
SCAF11-201ENST00000266589 TOMM20LQ6UXN7 152 aa8.96□□□□□ -0.97
SCAF11-201ENST00000266589 FAM24BQ8N5W8 94 aa8.96□□□□□ -0.97
SCAF11-201ENST00000266589 TEX29Q8N6K0 151 aa8.96□□□□□ -0.97
SCAF11-201ENST00000266589 C2CD4CQ8TF44 421 aa8.96□□□□□ -0.97
SCAF11-201ENST00000266589 ZNF586Q9NXT0 402 aa8.96□□□□□ -0.97
SCAF11-201ENST00000266589 CXorf65A6NEN9 183 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 C9JCJ5 164 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 PPP5D1E7EU14 171 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 IGLV1-40P01703 118 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 MT-ND4LP03901 98 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 HNF1AP20823 631 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 OR4F17Q8NGA8 305 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 HIST1H2BAQ96A08 127 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 ATP6V0BQ99437 205 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 CTDSP1Q9GZU7 261 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 KLK15Q9H2R5 256 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 ZFAND3Q9H8U3 227 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 TMEM242Q9NWH2 141 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 ZNF580Q9UK33 172 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 PRELID1Q9Y255 219 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 ITPR2Q14571 2701 aa8.96□□□□□ -0.98
SCAF11-201ENST00000266589 PGPA6NDG6 321 aa8.95□□□□□ -0.98
SCAF11-201ENST00000266589 CLDN34H7C241 214 aa8.95□□□□□ -0.98
SCAF11-201ENST00000266589 PEX7O00628 323 aa8.95□□□□□ -0.98
SCAF11-201ENST00000266589 GNG5P63218 68 aa8.95□□□□□ -0.98
SCAF11-201ENST00000266589 SIGLECL1Q8N7X8 197 aa8.95□□□□□ -0.98
SCAF11-201ENST00000266589 USMG5Q96IX5 58 aa8.95□□□□□ -0.98
SCAF11-201ENST00000266589 TCEAL7Q9BRU2 100 aa8.95□□□□□ -0.98
SCAF11-201ENST00000266589 Q9H3A6 140 aa8.95□□□□□ -0.98
SCAF11-201ENST00000266589 URGCP-MRPS24S4R325 110 aa8.95□□□□□ -0.98
SCAF11-201ENST00000266589 CCDC168Q8NDH2 2452 aa8.95□□□□□ -0.98
SCAF11-201ENST00000266589 FLNAP21333 2647 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms