RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 EXOC3-AS1Q8N2X6 119 aa13.58□□□□□ -0.24
PHRF1-201ENST00000264555 LINC00587B1AMM8 73 aa13.58□□□□□ -0.24
PHRF1-201ENST00000264555 LY6HO94772 140 aa13.58□□□□□ -0.24
PHRF1-201ENST00000264555 C10orf91Q5T1B1 145 aa13.58□□□□□ -0.24
PHRF1-201ENST00000264555 DUX4L9Q6RFH8 374 aaPredicted RBP13.58□□□□□ -0.24
PHRF1-201ENST00000264555 NDUFA4L2Q9NRX3 87 aa13.58□□□□□ -0.24
PHRF1-201ENST00000264555 PRSS22Q9GZN4 317 aa13.57□□□□□ -0.24
PHRF1-201ENST00000264555 A0A1W2PPI3 338 aa13.57□□□□□ -0.24
PHRF1-201ENST00000264555 RNASE4P34096 147 aaKnown RBP13.57□□□□□ -0.24
PHRF1-201ENST00000264555 NBL1P41271 181 aa13.57□□□□□ -0.24
PHRF1-201ENST00000264555 KLF17Q5JT82 389 aaPredicted RBP13.57□□□□□ -0.24
PHRF1-201ENST00000264555 OR5AN1Q8NGI8 311 aa13.57□□□□□ -0.24
PHRF1-201ENST00000264555 C18orf15Q96N68 181 aa13.57□□□□□ -0.24
PHRF1-201ENST00000264555 SPRY4Q9C004 299 aa13.57□□□□□ -0.24
PHRF1-201ENST00000264555 SMAD7O15105 426 aaKnown RBP13.57□□□□□ -0.24
PHRF1-201ENST00000264555 AMBPP02760 352 aa13.57□□□□□ -0.24
PHRF1-201ENST00000264555 DNLZQ5SXM8 178 aa13.57□□□□□ -0.24
PHRF1-201ENST00000264555 C14orf144Q96I85 54 aa13.57□□□□□ -0.24
PHRF1-201ENST00000264555 FGF23Q9GZV9 251 aaPredicted RBP13.57□□□□□ -0.24
PHRF1-201ENST00000264555 LINC00614P0C842 121 aa13.56□□□□□ -0.24
PHRF1-201ENST00000264555 GCSHP23434 173 aa13.56□□□□□ -0.24
PHRF1-201ENST00000264555 PAPPA-AS1Q5QFB9 102 aa13.56□□□□□ -0.24
PHRF1-201ENST00000264555 IGF2-ASQ6U949 168 aa13.56□□□□□ -0.24
PHRF1-201ENST00000264555 LINC00311Q8N616 119 aa13.56□□□□□ -0.24
PHRF1-201ENST00000264555 OR4X2Q8NGF9 303 aa13.56□□□□□ -0.24
PHRF1-201ENST00000264555 HIST1H4GQ99525 98 aa13.56□□□□□ -0.24
PHRF1-201ENST00000264555 MIEN1Q9BRT3 115 aa13.56□□□□□ -0.24
PHRF1-201ENST00000264555 GAGE10A6NGK3 116 aa13.56□□□□□ -0.24
PHRF1-201ENST00000264555 WT1P19544 449 aaPredicted RBP13.56□□□□□ -0.24
PHRF1-201ENST00000264555 ZNF134P52741 427 aa13.56□□□□□ -0.24
PHRF1-201ENST00000264555 PSMG4Q5JS54 123 aa13.56□□□□□ -0.24
PHRF1-201ENST00000264555 C11orf53Q8IXP5 236 aa13.56□□□□□ -0.24
PHRF1-201ENST00000264555 NPFFO15130 113 aa13.55□□□□□ -0.24
PHRF1-201ENST00000264555 ERASQ7Z444 233 aa13.55□□□□□ -0.24
PHRF1-201ENST00000264555 A0A1B0GV90 55 aa13.55□□□□□ -0.24
PHRF1-201ENST00000264555 LOXP28300 417 aaPredicted RBP13.55□□□□□ -0.24
PHRF1-201ENST00000264555 LYPD1Q8N2G4 141 aa13.55□□□□□ -0.24
PHRF1-201ENST00000264555 COL6A6A6NMZ7 2263 aa13.55□□□□□ -0.24
PHRF1-201ENST00000264555 ZNF726P1Q15940 193 aa13.55□□□□□ -0.24
PHRF1-201ENST00000264555 KIAA1549LQ6ZVL6 1849 aa13.55□□□□□ -0.24
PHRF1-201ENST00000264555 H7C1H1 209 aa13.55□□□□□ -0.24
PHRF1-201ENST00000264555 PPBPP02775 128 aa13.55□□□□□ -0.24
PHRF1-201ENST00000264555 FABP2P12104 132 aa13.55□□□□□ -0.24
PHRF1-201ENST00000264555 INTS1Q8N201 2190 aaKnown RBP13.54□□□□□ -0.24
PHRF1-201ENST00000264555 TOMM40O96008 361 aa13.54□□□□□ -0.24
PHRF1-201ENST00000264555 SIGLEC15Q6ZMC9 328 aa13.54□□□□□ -0.24
PHRF1-201ENST00000264555 CHCHD1Q96BP2 118 aaKnown RBP13.54□□□□□ -0.24
PHRF1-201ENST00000264555 TMEM160Q9NX00 188 aa13.54□□□□□ -0.24
PHRF1-201ENST00000264555 LINC00527Q9UJ94 153 aa13.54□□□□□ -0.24
PHRF1-201ENST00000264555 TRAV21A0A0B4J279 112 aa13.54□□□□□ -0.24
PHRF1-201ENST00000264555 RPL15P61313 204 aaKnown RBP13.54□□□□□ -0.24
PHRF1-201ENST00000264555 AMMECR1LQ6DCA0 310 aa13.54□□□□□ -0.24
PHRF1-201ENST00000264555 TMEM219Q86XT9 240 aa13.54□□□□□ -0.24
PHRF1-201ENST00000264555 F2Z2F3 143 aa13.54□□□□□ -0.24
PHRF1-201ENST00000264555 NDUFAF3Q9BU61 184 aa13.54□□□□□ -0.24
PHRF1-201ENST00000264555 K7ERU9 68 aa13.53□□□□□ -0.24
PHRF1-201ENST00000264555 ZNF329Q86UD4 541 aa13.53□□□□□ -0.24
PHRF1-201ENST00000264555 NIT1Q86X76 327 aa13.53□□□□□ -0.24
PHRF1-201ENST00000264555 KIR3DL3Q8N743 410 aa13.53□□□□□ -0.24
PHRF1-201ENST00000264555 C21orf62-AS1Q17RA5 79 aa13.53□□□□□ -0.24
PHRF1-201ENST00000264555 HAPLN4Q86UW8 402 aa13.53□□□□□ -0.24
PHRF1-201ENST00000264555 NUTF2P61970 127 aaKnown RBP13.53□□□□□ -0.24
PHRF1-201ENST00000264555 PEMTQ9UBM1 199 aa13.53□□□□□ -0.24
PHRF1-201ENST00000264555 TRBV7-1A0A0A6YYK4 115 aa13.53□□□□□ -0.24
PHRF1-201ENST00000264555 NPIPB5A8MRT5 1133 aa13.53□□□□□ -0.24
PHRF1-201ENST00000264555 OVOL1O14753 267 aa13.53□□□□□ -0.24
PHRF1-201ENST00000264555 PRSS33Q8NF86 280 aa13.53□□□□□ -0.24
PHRF1-201ENST00000264555 B4DSR2 109 aa13.53□□□□□ -0.24
PHRF1-201ENST00000264555 UBE2L6O14933 153 aa13.53□□□□□ -0.24
PHRF1-201ENST00000264555 LGALS3P17931 250 aaKnown RBP13.53□□□□□ -0.24
PHRF1-201ENST00000264555 PCNX2A6NKB5 2137 aa13.52□□□□□ -0.24
PHRF1-201ENST00000264555 NBASA2RRP1 2371 aa13.52□□□□□ -0.24
PHRF1-201ENST00000264555 IGKV2-40A0A087WW87 121 aaPredicted RBP13.52□□□□□ -0.24
PHRF1-201ENST00000264555 OR11H12B2RN74 326 aa13.52□□□□□ -0.24
PHRF1-201ENST00000264555 IGKV2D-40P01614 121 aaPredicted RBP13.52□□□□□ -0.24
PHRF1-201ENST00000264555 OR11H1Q8NG94 326 aa13.52□□□□□ -0.24
PHRF1-201ENST00000264555 OR11H2Q8NH07 326 aa13.52□□□□□ -0.24
PHRF1-201ENST00000264555 SCGB3A1Q96QR1 104 aa13.52□□□□□ -0.24
PHRF1-201ENST00000264555 CACNG7P62955 275 aa13.52□□□□□ -0.24
PHRF1-201ENST00000264555 BPESC1Q9GZL8 116 aa13.52□□□□□ -0.24
PHRF1-201ENST00000264555 ZNF562Q6V9R5 426 aa13.52□□□□□ -0.25
PHRF1-201ENST00000264555 RAB37Q96AX2 223 aa13.52□□□□□ -0.25
PHRF1-201ENST00000264555 A0A1W2PNU3 283 aaPredicted RBP13.51□□□□□ -0.25
PHRF1-201ENST00000264555 GZMBP10144 247 aa13.51□□□□□ -0.25
PHRF1-201ENST00000264555 NUP35Q8NFH5 326 aa13.51□□□□□ -0.25
PHRF1-201ENST00000264555 FOXC2Q99958 501 aa13.51□□□□□ -0.25
PHRF1-201ENST00000264555 DIDO1Q9BTC0 2240 aaKnown RBP13.51□□□□□ -0.25
PHRF1-201ENST00000264555 MMP23AO75900 390 aa13.51□□□□□ -0.25
PHRF1-201ENST00000264555 LEPP41159 167 aa13.51□□□□□ -0.25
PHRF1-201ENST00000264555 PSG3Q16557 428 aa13.5□□□□□ -0.25
PHRF1-201ENST00000264555 GLMPQ8WWB7 406 aa13.5□□□□□ -0.25
PHRF1-201ENST00000264555 NXT2Q9NPJ8 142 aaKnown RBP13.5□□□□□ -0.25
PHRF1-201ENST00000264555 HBDP02042 147 aa13.5□□□□□ -0.25
PHRF1-201ENST00000264555 SHANK2-AS3Q9BTD1 123 aa13.5□□□□□ -0.25
PHRF1-201ENST00000264555 TRAV9-2A0A087WT02 112 aa13.5□□□□□ -0.25
PHRF1-201ENST00000264555 KAAG1Q9UBP8 84 aa13.5□□□□□ -0.25
PHRF1-201ENST00000264555 SAA4P35542 130 aa13.5□□□□□ -0.25
PHRF1-201ENST00000264555 POU2AF1Q16633 256 aa13.5□□□□□ -0.25
PHRF1-201ENST00000264555 C19orf54Q5BKX5 351 aa13.5□□□□□ -0.25
PHRF1-201ENST00000264555 AKAP6Q13023 2319 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms