RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 FAM209BQ5JX69 171 aa12.97□□□□□ -0.33
SDCBP-201ENST00000260130 OR4A16Q8NH70 328 aa12.97□□□□□ -0.33
SDCBP-201ENST00000260130 SRSF8Q9BRL6 282 aaKnown RBP12.97□□□□□ -0.33
SDCBP-201ENST00000260130 IFITM10A6NMD0 228 aa12.96□□□□□ -0.33
SDCBP-201ENST00000260130 C15orf61A6NNL5 157 aa12.96□□□□□ -0.33
SDCBP-201ENST00000260130 CRYGCP07315 174 aa12.96□□□□□ -0.33
SDCBP-201ENST00000260130 SSX7Q7RTT5 188 aa12.96□□□□□ -0.33
SDCBP-201ENST00000260130 OR1N2Q8NGR9 330 aa12.96□□□□□ -0.33
SDCBP-201ENST00000260130 USMG5Q96IX5 58 aa12.96□□□□□ -0.33
SDCBP-201ENST00000260130 NDUFA4L2Q9NRX3 87 aa12.96□□□□□ -0.33
SDCBP-201ENST00000260130 TMEM14BQ9NUH8 114 aa12.96□□□□□ -0.33
SDCBP-201ENST00000260130 SLC39A9Q9NUM3 307 aa12.96□□□□□ -0.33
SDCBP-201ENST00000260130 TRBV24-1A0A075B6N3 115 aa12.96□□□□□ -0.34
SDCBP-201ENST00000260130 TRBV9A0A0B4J1U6 114 aa12.96□□□□□ -0.34
SDCBP-201ENST00000260130 TNFRSF9Q07011 255 aa12.96□□□□□ -0.34
SDCBP-201ENST00000260130 FHL3Q13643 280 aa12.96□□□□□ -0.34
SDCBP-201ENST00000260130 ATP6V1FQ16864 119 aa12.96□□□□□ -0.34
SDCBP-201ENST00000260130 TMEM14EPQ6UXP3 125 aa12.96□□□□□ -0.34
SDCBP-201ENST00000260130 OR5B3Q8NH48 314 aa12.96□□□□□ -0.34
SDCBP-201ENST00000260130 UBE2L5PA0A1B0GUS4 154 aa12.95□□□□□ -0.34
SDCBP-201ENST00000260130 IGLC7A0M8Q6 106 aa12.95□□□□□ -0.34
SDCBP-201ENST00000260130 RBMXL2O75526 392 aaKnown RBP12.95□□□□□ -0.34
SDCBP-201ENST00000260130 ELLP55199 621 aaPredicted RBP12.95□□□□□ -0.34
SDCBP-201ENST00000260130 PYY3Q5JQD4 70 aa12.95□□□□□ -0.34
SDCBP-201ENST00000260130 OR10W1Q8NGF6 305 aa12.95□□□□□ -0.34
SDCBP-201ENST00000260130 DPF1Q92782 380 aa12.95□□□□□ -0.34
SDCBP-201ENST00000260130 HINT2Q9BX68 163 aa12.95□□□□□ -0.34
SDCBP-201ENST00000260130 RBKSQ9H477 322 aa12.95□□□□□ -0.34
SDCBP-201ENST00000260130 NAT8Q9UHE5 227 aa12.95□□□□□ -0.34
SDCBP-201ENST00000260130 REG1AP05451 166 aa12.94□□□□□ -0.34
SDCBP-201ENST00000260130 P0C879 139 aa12.94□□□□□ -0.34
SDCBP-201ENST00000260130 RHOGP84095 191 aa12.94□□□□□ -0.34
SDCBP-201ENST00000260130 C19orf35Q6ZS72 473 aa12.94□□□□□ -0.34
SDCBP-201ENST00000260130 HSPB7Q9UBY9 170 aa12.94□□□□□ -0.34
SDCBP-201ENST00000260130 FAM223BA6NKX1 122 aa12.94□□□□□ -0.34
SDCBP-201ENST00000260130 MBP02144 154 aa12.94□□□□□ -0.34
SDCBP-201ENST00000260130 TRGC1P0CF51 173 aa12.94□□□□□ -0.34
SDCBP-201ENST00000260130 OR8G2PQ6IF36 304 aa12.94□□□□□ -0.34
SDCBP-201ENST00000260130 FAM223AQ8IWN6 122 aa12.94□□□□□ -0.34
SDCBP-201ENST00000260130 HIST3H2BBQ8N257 126 aa12.94□□□□□ -0.34
SDCBP-201ENST00000260130 NECAP1Q8NC96 275 aa12.94□□□□□ -0.34
SDCBP-201ENST00000260130 NDUFS6O75380 124 aaKnown RBP12.93□□□□□ -0.34
SDCBP-201ENST00000260130 DEFA4P12838 97 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 CD81P60033 236 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 MEF2BQ02080 365 aaPredicted RBP12.93□□□□□ -0.34
SDCBP-201ENST00000260130 WT1-ASQ06250 92 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 FANCD2OSQ96PS1 177 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 TMEM147Q9BVK8 224 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 LINC01619G3V211 115 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 G3V4G9 280 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 GATCO43716 136 aaKnown RBP12.93□□□□□ -0.34
SDCBP-201ENST00000260130 OR2J3O76001 311 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 IGLL1P15814 213 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 PSMB3P49720 205 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 HSPE1P61604 102 aaKnown RBP12.93□□□□□ -0.34
SDCBP-201ENST00000260130 ATP5G2Q06055 141 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 OXLD1Q5BKU9 147 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 DNLZQ5SXM8 178 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 CYP2G1PQ6ZSU1 146 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 OR10D4PQ8NGN7 298 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 FRZBQ92765 325 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 PFDN5Q99471 154 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 SMIM7Q9BQ49 75 aa12.93□□□□□ -0.34
SDCBP-201ENST00000260130 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.93□□□□□ -0.34
SDCBP-201ENST00000260130 IGHV4OR15-8A0A075B7B6 117 aa12.92□□□□□ -0.34
SDCBP-201ENST00000260130 A0A087WW49 117 aa12.92□□□□□ -0.34
SDCBP-201ENST00000260130 CTXND1A0A1B0GTU2 59 aa12.92□□□□□ -0.34
SDCBP-201ENST00000260130 TMEM250H0YL14 139 aa12.92□□□□□ -0.34
SDCBP-201ENST00000260130 HIST1H1BP16401 226 aaKnown RBP12.92□□□□□ -0.34
SDCBP-201ENST00000260130 TMEM241Q24JQ0 296 aa12.92□□□□□ -0.34
SDCBP-201ENST00000260130 KLK9Q2XQG4 91 aa12.92□□□□□ -0.34
SDCBP-201ENST00000260130 SAMD5Q5TGI4 173 aa12.92□□□□□ -0.34
SDCBP-201ENST00000260130 RPP25LQ8N5L8 163 aaKnown RBP12.92□□□□□ -0.34
SDCBP-201ENST00000260130 KLK9Q9UKQ9 250 aa12.92□□□□□ -0.34
SDCBP-201ENST00000260130 CIB3Q96Q77 187 aaPredicted RBP12.91□□□□□ -0.34
SDCBP-201ENST00000260130 FBXL7Q9UJT9 491 aa12.91□□□□□ -0.34
SDCBP-201ENST00000260130 NOTCH1P46531 2555 aa12.91□□□□□ -0.34
SDCBP-201ENST00000260130 PRCDQ00LT1 54 aa12.91□□□□□ -0.34
SDCBP-201ENST00000260130 ADIRFQ15847 76 aa12.91□□□□□ -0.34
SDCBP-201ENST00000260130 C15orf32Q32M92 178 aa12.91□□□□□ -0.34
SDCBP-201ENST00000260130 GPR61Q9BZJ8 451 aa12.91□□□□□ -0.34
SDCBP-201ENST00000260130 MANBALQ9NQG1 85 aa12.91□□□□□ -0.34
SDCBP-201ENST00000260130 NOTCH3Q9UM47 2321 aa12.91□□□□□ -0.34
SDCBP-201ENST00000260130 MEGF8Q7Z7M0 2845 aa12.9□□□□□ -0.34
SDCBP-201ENST00000260130 IGLV11-55A0A075B6I3 123 aa12.9□□□□□ -0.34
SDCBP-201ENST00000260130 OR10P1Q8NGE3 313 aa12.9□□□□□ -0.34
SDCBP-201ENST00000260130 MCRIP2Q9BUT9 160 aaKnown RBP12.9□□□□□ -0.34
SDCBP-201ENST00000260130 PEF1Q9UBV8 284 aaKnown RBP12.9□□□□□ -0.34
SDCBP-201ENST00000260130 NDUFB8O95169 186 aa12.9□□□□□ -0.34
SDCBP-201ENST00000260130 BSXQ3C1V8 233 aa12.9□□□□□ -0.34
SDCBP-201ENST00000260130 ACSM6Q6P461 480 aa12.9□□□□□ -0.34
SDCBP-201ENST00000260130 ACTR3CQ9C0K3 210 aaPredicted RBP12.9□□□□□ -0.34
SDCBP-201ENST00000260130 SRD5A3Q9H8P0 318 aa12.9□□□□□ -0.34
SDCBP-201ENST00000260130 FGF7P21781 194 aa12.89□□□□□ -0.35
SDCBP-201ENST00000260130 SLURP1P55000 103 aa12.89□□□□□ -0.35
SDCBP-201ENST00000260130 GFI1BQ5VTD9 330 aa12.89□□□□□ -0.35
SDCBP-201ENST00000260130 ZNF709Q8N972 641 aa12.89□□□□□ -0.35
SDCBP-201ENST00000260130 OR10G9Q8NGN4 311 aa12.89□□□□□ -0.35
SDCBP-201ENST00000260130 OR10G7Q8NGN6 311 aa12.89□□□□□ -0.35
SDCBP-201ENST00000260130 DTD1Q8TEA8 209 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms