RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 BUB3O43684 328 aa10.66□□□□□ -0.7
VPS25-201ENST00000253794 JTBO76095 146 aa10.66□□□□□ -0.7
VPS25-201ENST00000253794 CD5P06127 495 aa10.66□□□□□ -0.7
VPS25-201ENST00000253794 S100A7P31151 101 aa10.66□□□□□ -0.7
VPS25-201ENST00000253794 B2MP61769 119 aa10.66□□□□□ -0.7
VPS25-201ENST00000253794 MIC13Q5XKP0 118 aa10.66□□□□□ -0.7
VPS25-201ENST00000253794 SCGB1C1Q8TD33 95 aa10.66□□□□□ -0.7
VPS25-201ENST00000253794 ARPC5LQ9BPX5 153 aa10.66□□□□□ -0.7
VPS25-201ENST00000253794 ARV1Q9H2C2 271 aa10.66□□□□□ -0.7
VPS25-201ENST00000253794 TMEM231Q9H6L2 316 aa10.66□□□□□ -0.7
VPS25-201ENST00000253794 SLC39A9Q9NUM3 307 aa10.66□□□□□ -0.7
VPS25-201ENST00000253794 NOTCH1P46531 2555 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 BORCS7-ASMTA0A0B4J1R7 106 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 TRAV25A0A0B4J276 109 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 BCL2L11O43521 198 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 HYPMO75409 117 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 APOHP02749 345 aaPredicted RBP10.65□□□□□ -0.7
VPS25-201ENST00000253794 LGALSLQ3ZCW2 172 aaPredicted RBP10.65□□□□□ -0.7
VPS25-201ENST00000253794 ZFP69Q49AA0 526 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 OXLD1Q5BKU9 147 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 C1orf194Q5T5A4 169 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 FAM90A2PQ658T7 463 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 RPL7L1Q6DKI1 246 aaKnown RBP10.65□□□□□ -0.7
VPS25-201ENST00000253794 C16orf54Q6UWD8 224 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 PATE2Q6UY27 113 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 Q6ZRG5 221 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 S100A7AQ86SG5 101 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 ZNF709Q8N972 641 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 OR2G3Q8NGZ4 309 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 ST8SIA2Q92186 375 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 NARS2Q96I59 477 aaKnown RBP10.65□□□□□ -0.7
VPS25-201ENST00000253794 PFDN5Q99471 154 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 PSMG3Q9BT73 122 aaPredicted RBP10.65□□□□□ -0.7
VPS25-201ENST00000253794 PBDC1Q9BVG4 233 aa10.65□□□□□ -0.7
VPS25-201ENST00000253794 G3V4G9 280 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 H3BRN7 92 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 ORM2P19652 201 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 CD300EQ496F6 205 aaPredicted RBP10.64□□□□□ -0.71
VPS25-201ENST00000253794 TMUB2Q71RG4 321 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 OR1L4Q8NGR5 311 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 OR1B1Q8NGR6 318 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 DYNLRB2Q8TF09 96 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 GATAD1Q8WUU5 269 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 GLMPQ8WWB7 406 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 TMEM37Q8WXS4 190 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 GNPNAT1Q96EK6 184 aaPredicted RBP10.64□□□□□ -0.71
VPS25-201ENST00000253794 GRAMD2BQ96HH9 432 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 SHANK2-AS3Q9BTD1 123 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 RSG1Q9BU20 258 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 SLC25A39Q9BZJ4 359 aaPredicted RBP10.64□□□□□ -0.71
VPS25-201ENST00000253794 ARL6Q9H0F7 186 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 ZMAT5Q9UDW3 170 aaKnown RBP10.64□□□□□ -0.71
VPS25-201ENST00000253794 RNF24Q9Y225 148 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 HIGD1AQ9Y241 93 aa10.64□□□□□ -0.71
VPS25-201ENST00000253794 TSPAN4O14817 238 aa10.63□□□□□ -0.71
VPS25-201ENST00000253794 ATP6V0CP27449 155 aa10.63□□□□□ -0.71
VPS25-201ENST00000253794 BEAN1Q3B7T3 259 aa10.63□□□□□ -0.71
VPS25-201ENST00000253794 LCN12Q6JVE5 192 aa10.63□□□□□ -0.71
VPS25-201ENST00000253794 C9orf62Q8N4C0 152 aa10.63□□□□□ -0.71
VPS25-201ENST00000253794 RNF2Q99496 336 aa10.63□□□□□ -0.71
VPS25-201ENST00000253794 DNAJC4Q9NNZ3 241 aa10.63□□□□□ -0.71
VPS25-201ENST00000253794 KANTRA0A1W2PQU2 76 aa10.62□□□□□ -0.71
VPS25-201ENST00000253794 ZNF98A6NK75 572 aa10.62□□□□□ -0.71
VPS25-201ENST00000253794 COX7A2P2O60397 106 aa10.62□□□□□ -0.71
VPS25-201ENST00000253794 OR5G3P0C626 314 aa10.62□□□□□ -0.71
VPS25-201ENST00000253794 SERF2P84101 59 aa10.62□□□□□ -0.71
VPS25-201ENST00000253794 C10orf113Q5VZT2 155 aa10.62□□□□□ -0.71
VPS25-201ENST00000253794 LAMTOR1Q6IAA8 161 aa10.62□□□□□ -0.71
VPS25-201ENST00000253794 TMEM61Q8N0U2 210 aa10.62□□□□□ -0.71
VPS25-201ENST00000253794 HSD17B11Q8NBQ5 300 aa10.62□□□□□ -0.71
VPS25-201ENST00000253794 STOML3Q8TAV4 291 aa10.62□□□□□ -0.71
VPS25-201ENST00000253794 GPR82Q96P67 336 aa10.62□□□□□ -0.71
VPS25-201ENST00000253794 DOK5Q9P104 306 aa10.62□□□□□ -0.71
VPS25-201ENST00000253794 IGHV3OR16-13A0A075B7E8 117 aa10.61□□□□□ -0.71
VPS25-201ENST00000253794 IGHV3-49A0A0A0MS15 119 aa10.61□□□□□ -0.71
VPS25-201ENST00000253794 IGHV3-74A0A0B4J1X5 117 aa10.61□□□□□ -0.71
VPS25-201ENST00000253794 TRAV2A0A0B4J234 112 aa10.61□□□□□ -0.71
VPS25-201ENST00000253794 IZUMO1RA6ND01 250 aa10.61□□□□□ -0.71
VPS25-201ENST00000253794 HELTA6NFD8 242 aa10.61□□□□□ -0.71
VPS25-201ENST00000253794 ZNF785A8K8V0 405 aa10.61□□□□□ -0.71
VPS25-201ENST00000253794 LINC00305Q7Z4B0 112 aa10.61□□□□□ -0.71
VPS25-201ENST00000253794 SPAG8Q99932 426 aaPredicted RBP10.61□□□□□ -0.71
VPS25-201ENST00000253794 IGHV3-66A0A0C4DH42 116 aa10.6□□□□□ -0.71
VPS25-201ENST00000253794 PFDN1O60925 122 aa10.6□□□□□ -0.71
VPS25-201ENST00000253794 EIF5AP63241 154 aaKnown RBP10.6□□□□□ -0.71
VPS25-201ENST00000253794 GCSAMLQ5JQS6 135 aa10.6□□□□□ -0.71
VPS25-201ENST00000253794 FFAR4Q5NUL3 377 aa10.6□□□□□ -0.71
VPS25-201ENST00000253794 SIGLEC15Q6ZMC9 328 aa10.6□□□□□ -0.71
VPS25-201ENST00000253794 RBPMS2Q6ZRY4 209 aaKnown RBP10.6□□□□□ -0.71
VPS25-201ENST00000253794 TCF24Q7RTU0 167 aa10.6□□□□□ -0.71
VPS25-201ENST00000253794 UHRF2Q96PU4 802 aa10.6□□□□□ -0.71
VPS25-201ENST00000253794 SCRT1Q9BWW7 348 aa10.6□□□□□ -0.71
VPS25-201ENST00000253794 MRPL32Q9BYC8 188 aaKnown RBP10.6□□□□□ -0.71
VPS25-201ENST00000253794 MRPS12O15235 138 aaKnown RBP10.59□□□□□ -0.71
VPS25-201ENST00000253794 MBP02144 154 aa10.59□□□□□ -0.71
VPS25-201ENST00000253794 SPP1P10451 314 aa10.59□□□□□ -0.71
VPS25-201ENST00000253794 M6PRP20645 277 aa10.59□□□□□ -0.71
VPS25-201ENST00000253794 KRTAP10-11P60412 298 aa10.59□□□□□ -0.71
VPS25-201ENST00000253794 PPP1R14BQ96C90 147 aa10.59□□□□□ -0.71
VPS25-201ENST00000253794 ZNF471Q9BX82 626 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms