RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 RPRMLQ8N4K4 120 aa3.38□□□□□ -1.87
UBE4A-201ENST00000252108 C8orf46Q8TAG6 207 aa3.38□□□□□ -1.87
UBE4A-201ENST00000252108 MAP1LC3AQ9H492 121 aa3.38□□□□□ -1.87
UBE4A-201ENST00000252108 RPUSD1Q9UJJ7 312 aaKnown RBP3.38□□□□□ -1.87
UBE4A-201ENST00000252108 GON4LQ3T8J9 2241 aa3.38□□□□□ -1.87
UBE4A-201ENST00000252108 A6NNC1 897 aa3.38□□□□□ -1.87
UBE4A-201ENST00000252108 ATP5LO75964 103 aa3.38□□□□□ -1.87
UBE4A-201ENST00000252108 IGHV3-13P01766 116 aa3.38□□□□□ -1.87
UBE4A-201ENST00000252108 SMIM13P0DJ93 91 aa3.38□□□□□ -1.87
UBE4A-201ENST00000252108 C8orf31Q8N9H6 132 aa3.38□□□□□ -1.87
UBE4A-201ENST00000252108 NUP35Q8NFH5 326 aa3.38□□□□□ -1.87
UBE4A-201ENST00000252108 SNRNP40Q96DI7 357 aaKnown RBP3.38□□□□□ -1.87
UBE4A-201ENST00000252108 SLC25A2Q9BXI2 301 aa3.38□□□□□ -1.87
UBE4A-201ENST00000252108 CLEC7AQ9BXN2 247 aa3.38□□□□□ -1.87
UBE4A-201ENST00000252108 TRBV6-1A0A0K0K1D8 114 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 A0A1B0GV72 72 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 H3BRM9 83 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 SCGB1A1P11684 91 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 NPPCP23582 126 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 PLP1P60201 277 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 GCSAMLQ5JQS6 135 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 ZNF826PQ6ZT77 177 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 LINC00305Q7Z4B0 112 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 BLNKQ8WV28 456 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 JKAMPQ9P055 326 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 TMEM189A5PLL7 270 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 UBE2L6O14933 153 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 SAA2P0DJI9 122 aaPredicted RBP3.37□□□□□ -1.87
UBE4A-201ENST00000252108 CDKN1AP38936 164 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 KIR2DL2P43627 348 aaPredicted RBP3.37□□□□□ -1.87
UBE4A-201ENST00000252108 GATA4P43694 442 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 CEBPDP49716 269 aaPredicted RBP3.37□□□□□ -1.87
UBE4A-201ENST00000252108 TNXAQ16473 311 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 RPL39P5Q59GN2 51 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 THAP8Q8NA92 274 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 LOC102724200A0A096LPH7 203 aaPredicted RBP3.37□□□□□ -1.87
UBE4A-201ENST00000252108 PGPEP1LA6NFU8 196 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 SHISA9B4DS77 424 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 CECR9P0C854 216 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 RNASE2P10153 161 aaKnown RBP3.37□□□□□ -1.87
UBE4A-201ENST00000252108 LOXL3P58215 753 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 TWIST1Q15672 202 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 UTF1Q5T230 341 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 FAM110DQ8TAY7 271 aaPredicted RBP3.37□□□□□ -1.87
UBE4A-201ENST00000252108 PGLYRP4Q96LB8 373 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 WNT9BO14905 357 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 TIMM23O14925 209 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 CELA3BP08861 270 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 IGFL3Q6UXB1 125 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 ZNF329Q86UD4 541 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 ORMDL3Q8N138 153 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 FAM19A2Q8N3H0 131 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 DEFB125Q8N687 156 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 NPIPB3Q92617 1050 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 ZNF414Q96IQ9 312 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 TMEM14CQ9P0S9 112 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 PPIAL4EA0A075B759 164 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 PPIAL4DF5H284 164 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 HBDP02042 147 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 PPIAL4FP0DN26 164 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 RPL7P18124 248 aaKnown RBP3.37□□□□□ -1.87
UBE4A-201ENST00000252108 LYZP61626 148 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 LINC00311Q8N616 119 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 ZNF114Q8NC26 417 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 ITLN1Q8WWA0 313 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 NXT2Q9NPJ8 142 aaKnown RBP3.37□□□□□ -1.87
UBE4A-201ENST00000252108 PLSCR4Q9NRQ2 329 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 PPIAL4AQ9Y536 164 aa3.37□□□□□ -1.87
UBE4A-201ENST00000252108 F5H697 171 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 NDUFS8O00217 210 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 FSTL3O95633 263 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 PPP1R17O96001 155 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 SAA1P0DJI8 122 aaPredicted RBP3.36□□□□□ -1.87
UBE4A-201ENST00000252108 S100A4P26447 101 aaKnown RBP3.36□□□□□ -1.87
UBE4A-201ENST00000252108 CTRLP40313 264 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 TFPI2P48307 235 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 LY6EQ16553 131 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 OCIAD2Q56VL3 154 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 FAM53AQ6NSI3 398 aaPredicted RBP3.36□□□□□ -1.87
UBE4A-201ENST00000252108 ZCCHC24Q8N2G6 241 aaKnown RBP3.36□□□□□ -1.87
UBE4A-201ENST00000252108 MYOZ3Q8TDC0 251 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 SPANXA1Q9NS26 97 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 AKAP9Q99996 3911 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 IGKV3-7A0A075B6H7 116 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 IGLV3-9A0A075B6K5 115 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 H0Y8G0 127 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 H0YJW9 148 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 K7EN84 100 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 ORM1P02763 201 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 COX8AP10176 69 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 HCFC1P51610 2035 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 LGALS9BQ3B8N2 356 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 LGALS9CQ6DKI2 356 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 OR2K2Q8NGT1 345 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 SLC25A39Q9BZJ4 359 aaPredicted RBP3.36□□□□□ -1.87
UBE4A-201ENST00000252108 Q9H3A6 140 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 RNF114Q9Y508 228 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 APOHP02749 345 aaPredicted RBP3.36□□□□□ -1.87
UBE4A-201ENST00000252108 HERVK_113P61574 105 aa3.36□□□□□ -1.87
UBE4A-201ENST00000252108 PDE6HQ13956 83 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms