RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CMYA5Q8N3K9 4069 aa10.31□□□□□ -0.76
SLIRP-201ENST00000238688 A0A087WWC5 75 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 NUPL2O15504 423 aaKnown RBP10.3□□□□□ -0.76
SLIRP-201ENST00000238688 OR7C2O60412 319 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 PAGE4O60829 102 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 APELAP0DMC3 54 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 PSG1P11464 419 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 ZNF90Q03938 601 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 ECSCRQ19T08 205 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 DEFB112Q30KQ8 113 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 FAM90A2PQ658T7 463 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 IQCF2Q8IXL9 164 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 ZNF502Q8TBZ5 544 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 C11orf52Q96A22 123 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 TVP23CQ96ET8 276 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 ZNF747Q9BV97 191 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 TUBA4BQ9H853 241 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 DOK5Q9P104 306 aa10.3□□□□□ -0.76
SLIRP-201ENST00000238688 A0A0G2JLM5 398 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 WI2-2373I1.2A0A1W2PRP0 233 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 FAM74A7A6NL05 159 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 RPL15P61313 204 aaKnown RBP10.29□□□□□ -0.76
SLIRP-201ENST00000238688 RHOGP84095 191 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 RELQ04864 619 aaPredicted RBP10.29□□□□□ -0.76
SLIRP-201ENST00000238688 GUCA2BQ16661 112 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 C15orf32Q32M92 178 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 Q56UQ5 140 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 ZNF600Q6ZNG1 722 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 MIR17HGQ75NE6 70 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 LINC00305Q7Z4B0 112 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 TMEM219Q86XT9 240 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 OR5T1Q8NG75 326 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 RNF125Q96EQ8 232 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 FAM167A-AS1Q96KT0 104 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 PAXXQ9BUH6 204 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 ZNF355PQ9NSJ1 428 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 TMEM242Q9NWH2 141 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 MRPL27Q9P0M9 148 aaKnown RBP10.29□□□□□ -0.76
SLIRP-201ENST00000238688 NAT8Q9UHE5 227 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 LY96Q9Y6Y9 160 aa10.29□□□□□ -0.76
SLIRP-201ENST00000238688 CXorf65A6NEN9 183 aa10.28□□□□□ -0.76
SLIRP-201ENST00000238688 BMPR1BO00238 502 aa10.28□□□□□ -0.76
SLIRP-201ENST00000238688 HMGB3O15347 200 aaKnown RBP10.28□□□□□ -0.76
SLIRP-201ENST00000238688 GATA2P23769 480 aaPredicted RBP10.28□□□□□ -0.76
SLIRP-201ENST00000238688 UBE2L3P68036 154 aaKnown RBP10.28□□□□□ -0.76
SLIRP-201ENST00000238688 FOXL1Q12952 345 aa10.28□□□□□ -0.76
SLIRP-201ENST00000238688 PATE2Q6UY27 113 aa10.28□□□□□ -0.76
SLIRP-201ENST00000238688 OR5AU1Q8NGC0 362 aa10.28□□□□□ -0.76
SLIRP-201ENST00000238688 OR1B1Q8NGR6 318 aa10.28□□□□□ -0.76
SLIRP-201ENST00000238688 OR4F5Q8NH21 305 aa10.28□□□□□ -0.76
SLIRP-201ENST00000238688 OR4F4Q96R69 305 aa10.28□□□□□ -0.76
SLIRP-201ENST00000238688 SMIM7Q9BQ49 75 aa10.28□□□□□ -0.76
SLIRP-201ENST00000238688 SHANK2-AS3Q9BTD1 123 aa10.28□□□□□ -0.76
SLIRP-201ENST00000238688 SLC25A2Q9BXI2 301 aa10.28□□□□□ -0.76
SLIRP-201ENST00000238688 NPFFR1Q9GZQ6 430 aa10.28□□□□□ -0.76
SLIRP-201ENST00000238688 OR51M1Q9H341 326 aa10.28□□□□□ -0.76
SLIRP-201ENST00000238688 TMPRSS5Q9H3S3 457 aa10.28□□□□□ -0.76
SLIRP-201ENST00000238688 SMCO4Q9NRQ5 59 aa10.28□□□□□ -0.76
SLIRP-201ENST00000238688 ZNF727A8MUV8 499 aa10.27□□□□□ -0.77
SLIRP-201ENST00000238688 H3BQ15 152 aa10.27□□□□□ -0.77
SLIRP-201ENST00000238688 HOXA3O43365 443 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-201ENST00000238688 OR2J3O76001 311 aa10.27□□□□□ -0.77
SLIRP-201ENST00000238688 ORM2P19652 201 aa10.27□□□□□ -0.77
SLIRP-201ENST00000238688 PPIFP30405 207 aaKnown RBP10.27□□□□□ -0.77
SLIRP-201ENST00000238688 ATP5G2Q06055 141 aa10.27□□□□□ -0.77
SLIRP-201ENST00000238688 TIGITQ495A1 244 aa10.27□□□□□ -0.77
SLIRP-201ENST00000238688 CST9LP1Q5W188 147 aa10.27□□□□□ -0.77
SLIRP-201ENST00000238688 BPIFA4PQ86YQ2 179 aa10.27□□□□□ -0.77
SLIRP-201ENST00000238688 LYPD1Q8N2G4 141 aa10.27□□□□□ -0.77
SLIRP-201ENST00000238688 ARL6IP6Q8N6S5 226 aa10.27□□□□□ -0.77
SLIRP-201ENST00000238688 ZNF491Q8N8L2 437 aa10.27□□□□□ -0.77
SLIRP-201ENST00000238688 GPR82Q96P67 336 aa10.27□□□□□ -0.77
SLIRP-201ENST00000238688 PRSS22Q9GZN4 317 aa10.27□□□□□ -0.77
SLIRP-201ENST00000238688 C9JCJ5 164 aa10.26□□□□□ -0.77
SLIRP-201ENST00000238688 F8W735 103 aaPredicted RBP10.26□□□□□ -0.77
SLIRP-201ENST00000238688 H3BRN7 92 aa10.26□□□□□ -0.77
SLIRP-201ENST00000238688 M0R036 132 aa10.26□□□□□ -0.77
SLIRP-201ENST00000238688 IGLV1-40P01703 118 aa10.26□□□□□ -0.77
SLIRP-201ENST00000238688 S100A9P06702 114 aaKnown RBP10.26□□□□□ -0.77
SLIRP-201ENST00000238688 CTSGP08311 255 aa10.26□□□□□ -0.77
SLIRP-201ENST00000238688 MEOX2P50222 304 aa10.26□□□□□ -0.77
SLIRP-201ENST00000238688 LYZP61626 148 aa10.26□□□□□ -0.77
SLIRP-201ENST00000238688 PDE6HQ13956 83 aa10.26□□□□□ -0.77
SLIRP-201ENST00000238688 TMEM241Q24JQ0 296 aa10.26□□□□□ -0.77
SLIRP-201ENST00000238688 SPATA31B1PQ5VZV4 182 aa10.26□□□□□ -0.77
SLIRP-201ENST00000238688 C19orf35Q6ZS72 473 aa10.26□□□□□ -0.77
SLIRP-201ENST00000238688 SLC25A39Q9BZJ4 359 aaPredicted RBP10.26□□□□□ -0.77
SLIRP-201ENST00000238688 CTDSP1Q9GZU7 261 aa10.26□□□□□ -0.77
SLIRP-201ENST00000238688 SDF2L1Q9HCN8 221 aa10.26□□□□□ -0.77
SLIRP-201ENST00000238688 IGHV3-48P01763 117 aa10.25□□□□□ -0.77
SLIRP-201ENST00000238688 IGHV4-59P01825 116 aa10.25□□□□□ -0.77
SLIRP-201ENST00000238688 IL4P05112 153 aa10.25□□□□□ -0.77
SLIRP-201ENST00000238688 HIST1H1EP10412 219 aaKnown RBP10.25□□□□□ -0.77
SLIRP-201ENST00000238688 CFHR3Q02985 330 aa10.25□□□□□ -0.77
SLIRP-201ENST00000238688 LY6EQ16553 131 aa10.25□□□□□ -0.77
SLIRP-201ENST00000238688 C1orf194Q5T5A4 169 aa10.25□□□□□ -0.77
SLIRP-201ENST00000238688 HIST1H2BAQ96A08 127 aa10.25□□□□□ -0.77
SLIRP-201ENST00000238688 SMIM12Q96EX1 92 aa10.25□□□□□ -0.77
SLIRP-201ENST00000238688 ZNF503Q96F45 646 aa10.25□□□□□ -0.77
SLIRP-201ENST00000238688 PARLQ9H300 379 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms