RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 RNF125Q96EQ8 232 aa14.15□□□□□ -0.14
VIM-201ENST00000224237 TVP23CQ96ET8 276 aa14.15□□□□□ -0.14
VIM-201ENST00000224237 PAXXQ9BUH6 204 aa14.15□□□□□ -0.14
VIM-201ENST00000224237 OR51M1Q9H341 326 aa14.15□□□□□ -0.14
VIM-201ENST00000224237 YTHDF2Q9Y5A9 579 aaKnown RBP14.15□□□□□ -0.14
VIM-201ENST00000224237 OR2C1O95371 312 aa14.14□□□□□ -0.15
VIM-201ENST00000224237 IL4P05112 153 aa14.14□□□□□ -0.15
VIM-201ENST00000224237 CRYBA1P05813 215 aa14.14□□□□□ -0.15
VIM-201ENST00000224237 PPIFP30405 207 aaKnown RBP14.14□□□□□ -0.15
VIM-201ENST00000224237 AKR1C3P42330 323 aa14.14□□□□□ -0.15
VIM-201ENST00000224237 EEF1AKMT3Q96AZ1 226 aa14.14□□□□□ -0.15
VIM-201ENST00000224237 MS4A10Q96PG2 267 aa14.14□□□□□ -0.15
VIM-201ENST00000224237 MRPL27Q9P0M9 148 aaKnown RBP14.14□□□□□ -0.15
VIM-201ENST00000224237 A0A087WWC5 75 aa14.14□□□□□ -0.15
VIM-201ENST00000224237 TRBV7-1A0A0A6YYK4 115 aa14.14□□□□□ -0.15
VIM-201ENST00000224237 WI2-2373I1.2A0A1W2PRP0 233 aa14.14□□□□□ -0.15
VIM-201ENST00000224237 CTSGP08311 255 aa14.14□□□□□ -0.15
VIM-201ENST00000224237 Q6ZS46 218 aa14.14□□□□□ -0.15
VIM-201ENST00000224237 NOL4LQ96MY1 436 aaPredicted RBP14.14□□□□□ -0.15
VIM-201ENST00000224237 SLC25A39Q9BZJ4 359 aaPredicted RBP14.14□□□□□ -0.15
VIM-201ENST00000224237 ZNF727A8MUV8 499 aa14.13□□□□□ -0.15
VIM-201ENST00000224237 HOXA3O43365 443 aaPredicted RBP14.13□□□□□ -0.15
VIM-201ENST00000224237 S100A7AQ86SG5 101 aa14.13□□□□□ -0.15
VIM-201ENST00000224237 RPUSD4Q96CM3 377 aaKnown RBP14.13□□□□□ -0.15
VIM-201ENST00000224237 ATP6V0BQ99437 205 aa14.13□□□□□ -0.15
VIM-201ENST00000224237 SMIM7Q9BQ49 75 aa14.13□□□□□ -0.15
VIM-201ENST00000224237 PARLQ9H300 379 aa14.13□□□□□ -0.15
VIM-201ENST00000224237 A0A1W2PRE2 83 aa14.12□□□□□ -0.15
VIM-201ENST00000224237 B4DEV8 164 aa14.12□□□□□ -0.15
VIM-201ENST00000224237 CD5LO43866 347 aa14.12□□□□□ -0.15
VIM-201ENST00000224237 TRGV3P03979 118 aa14.12□□□□□ -0.15
VIM-201ENST00000224237 PYYP10082 97 aa14.12□□□□□ -0.15
VIM-201ENST00000224237 GPR183P32249 361 aa14.12□□□□□ -0.15
VIM-201ENST00000224237 ATP5G2Q06055 141 aa14.12□□□□□ -0.15
VIM-201ENST00000224237 PNRC1Q12796 327 aaPredicted RBP14.12□□□□□ -0.15
VIM-201ENST00000224237 HIST1H2BAQ96A08 127 aa14.12□□□□□ -0.15
VIM-201ENST00000224237 FXYD5Q96DB9 178 aa14.12□□□□□ -0.15
VIM-201ENST00000224237 CCDC140Q96MF4 163 aa14.12□□□□□ -0.15
VIM-201ENST00000224237 CHRDL1Q9BU40 450 aa14.12□□□□□ -0.15
VIM-201ENST00000224237 CLEC3BP05452 202 aa14.11□□□□□ -0.15
VIM-201ENST00000224237 ADMP35318 185 aa14.11□□□□□ -0.15
VIM-201ENST00000224237 ZNF674Q2M3X9 581 aa14.11□□□□□ -0.15
VIM-201ENST00000224237 OTOGQ6ZRI0 2925 aa14.11□□□□□ -0.15
VIM-201ENST00000224237 H3BRN7 92 aa14.1□□□□□ -0.15
VIM-201ENST00000224237 TPPP2P59282 170 aa14.1□□□□□ -0.15
VIM-201ENST00000224237 USF2Q15853 346 aaPredicted RBP14.1□□□□□ -0.15
VIM-201ENST00000224237 ZNF600Q6ZNG1 722 aa14.1□□□□□ -0.15
VIM-201ENST00000224237 SHANK2-AS3Q9BTD1 123 aa14.1□□□□□ -0.15
VIM-201ENST00000224237 NAT8Q9UHE5 227 aa14.1□□□□□ -0.15
VIM-201ENST00000224237 CXorf65A6NEN9 183 aa14.1□□□□□ -0.15
VIM-201ENST00000224237 GP9P14770 177 aa14.1□□□□□ -0.15
VIM-201ENST00000224237 NPPCP23582 126 aa14.1□□□□□ -0.15
VIM-201ENST00000224237 CFHR3Q02985 330 aa14.1□□□□□ -0.15
VIM-201ENST00000224237 CLEC19AQ6UXS0 136 aa14.1□□□□□ -0.15
VIM-201ENST00000224237 ISOC2Q96AB3 205 aa14.1□□□□□ -0.15
VIM-201ENST00000224237 USMG5Q96IX5 58 aa14.1□□□□□ -0.15
VIM-201ENST00000224237 SDF2L1Q9HCN8 221 aa14.1□□□□□ -0.15
VIM-201ENST00000224237 SCO2A0A1W2PP80 73 aa14.09□□□□□ -0.15
VIM-201ENST00000224237 TGOLN2O43493 480 aa14.09□□□□□ -0.15
VIM-201ENST00000224237 NDUFB4O95168 129 aa14.09□□□□□ -0.15
VIM-201ENST00000224237 SRP14P37108 136 aaKnown RBP14.09□□□□□ -0.15
VIM-201ENST00000224237 LEMD1Q68G75 181 aa14.09□□□□□ -0.15
VIM-201ENST00000224237 C11orf52Q96A22 123 aa14.09□□□□□ -0.15
VIM-201ENST00000224237 NPFFR1Q9GZQ6 430 aa14.09□□□□□ -0.15
VIM-201ENST00000224237 TMEM14CQ9P0S9 112 aa14.09□□□□□ -0.15
VIM-201ENST00000224237 GGTLC3B5MD39 225 aa14.08□□□□□ -0.16
VIM-201ENST00000224237 IGLV1-40P01703 118 aa14.08□□□□□ -0.16
VIM-201ENST00000224237 RAB5BP61020 215 aa14.08□□□□□ -0.16
VIM-201ENST00000224237 TMEM241Q24JQ0 296 aa14.08□□□□□ -0.16
VIM-201ENST00000224237 SIGLECL1Q8N7X8 197 aa14.08□□□□□ -0.16
VIM-201ENST00000224237 PRSS22Q9GZN4 317 aa14.08□□□□□ -0.16
VIM-201ENST00000224237 BMPR1BO00238 502 aa14.08□□□□□ -0.16
VIM-201ENST00000224237 S100A7P31151 101 aa14.08□□□□□ -0.16
VIM-201ENST00000224237 FAM24BQ8N5W8 94 aa14.08□□□□□ -0.16
VIM-201ENST00000224237 DUX5Q96PT3 197 aa14.08□□□□□ -0.16
VIM-201ENST00000224237 GNB4Q9HAV0 340 aa14.08□□□□□ -0.16
VIM-201ENST00000224237 BIN3Q9NQY0 253 aa14.08□□□□□ -0.16
VIM-201ENST00000224237 YAE1D1Q9NRH1 226 aa14.08□□□□□ -0.16
VIM-201ENST00000224237 TMEM242Q9NWH2 141 aa14.08□□□□□ -0.16
VIM-201ENST00000224237 RNF24Q9Y225 148 aa14.08□□□□□ -0.16
VIM-201ENST00000224237 C1orf196B1AJZ1 125 aa14.07□□□□□ -0.16
VIM-201ENST00000224237 NBEAP1P0C6P0 100 aa14.07□□□□□ -0.16
VIM-201ENST00000224237 PF4V1P10720 104 aa14.07□□□□□ -0.16
VIM-201ENST00000224237 RAB5AP20339 215 aa14.07□□□□□ -0.16
VIM-201ENST00000224237 SUMO1P63165 101 aaKnown RBP14.07□□□□□ -0.16
VIM-201ENST00000224237 TMEM95Q3KNT9 176 aa14.07□□□□□ -0.16
VIM-201ENST00000224237 ZNF343Q6P1L6 599 aa14.07□□□□□ -0.16
VIM-201ENST00000224237 BPIFA4PQ86YQ2 179 aa14.07□□□□□ -0.16
VIM-201ENST00000224237 TMEM86BQ8N661 226 aa14.07□□□□□ -0.16
VIM-201ENST00000224237 SMR3AQ99954 134 aa14.07□□□□□ -0.16
VIM-201ENST00000224237 ZNF98A6NK75 572 aa14.06□□□□□ -0.16
VIM-201ENST00000224237 HNF1AP20823 631 aa14.06□□□□□ -0.16
VIM-201ENST00000224237 RELQ04864 619 aaPredicted RBP14.06□□□□□ -0.16
VIM-201ENST00000224237 YPEL4Q96NS1 127 aa14.06□□□□□ -0.16
VIM-201ENST00000224237 DERL1Q9BUN8 251 aa14.06□□□□□ -0.16
VIM-201ENST00000224237 RABAC1Q9UI14 185 aa14.06□□□□□ -0.16
VIM-201ENST00000224237 A0A0G2JLM5 398 aa14.06□□□□□ -0.16
VIM-201ENST00000224237 BLNKQ8WV28 456 aa14.06□□□□□ -0.16
VIM-201ENST00000224237 PRELID1Q9Y255 219 aa14.06□□□□□ -0.16
VIM-201ENST00000224237 ANK3Q12955 4377 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms