RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 GBGT1Q8N5D6 347 aa11.06□□□□□ -0.64
UPK3A-201ENST00000216211 SMIM8Q96KF7 97 aa11.06□□□□□ -0.64
UPK3A-201ENST00000216211 HSPB7Q9UBY9 170 aa11.06□□□□□ -0.64
UPK3A-201ENST00000216211 FAM24AA6NFZ4 105 aa11.05□□□□□ -0.64
UPK3A-201ENST00000216211 TMEM50AO95807 157 aa11.05□□□□□ -0.64
UPK3A-201ENST00000216211 RAB14P61106 215 aa11.05□□□□□ -0.64
UPK3A-201ENST00000216211 CEMP1Q6PRD7 247 aaPredicted RBP11.05□□□□□ -0.64
UPK3A-201ENST00000216211 ALKAL2Q6UX46 152 aa11.05□□□□□ -0.64
UPK3A-201ENST00000216211 BAP18Q8IXM2 172 aa11.05□□□□□ -0.64
UPK3A-201ENST00000216211 TMEM252Q8N6L7 170 aa11.05□□□□□ -0.64
UPK3A-201ENST00000216211 FBXL17Q9UF56 701 aa11.05□□□□□ -0.64
UPK3A-201ENST00000216211 CACFD1Q9UGQ2 172 aa11.05□□□□□ -0.64
UPK3A-201ENST00000216211 IGSF23A1L1A6 192 aa11.04□□□□□ -0.64
UPK3A-201ENST00000216211 LINC00862A6NCI5 91 aa11.04□□□□□ -0.64
UPK3A-201ENST00000216211 BAXQ07812 192 aa11.04□□□□□ -0.64
UPK3A-201ENST00000216211 FAM90A2PQ658T7 463 aa11.04□□□□□ -0.64
UPK3A-201ENST00000216211 TOMM20LQ6UXN7 152 aa11.04□□□□□ -0.64
UPK3A-201ENST00000216211 ARV1Q9H2C2 271 aa11.04□□□□□ -0.64
UPK3A-201ENST00000216211 SLC25A32Q9H2D1 315 aa11.04□□□□□ -0.64
UPK3A-201ENST00000216211 NXPH3O95157 252 aa11.03□□□□□ -0.64
UPK3A-201ENST00000216211 APOHP02749 345 aaPredicted RBP11.03□□□□□ -0.64
UPK3A-201ENST00000216211 ATF4P18848 351 aaPredicted RBP11.03□□□□□ -0.64
UPK3A-201ENST00000216211 CAV2P51636 162 aa11.03□□□□□ -0.64
UPK3A-201ENST00000216211 CMC4P56277 68 aaPredicted RBP11.03□□□□□ -0.64
UPK3A-201ENST00000216211 NHLH2Q02577 135 aa11.03□□□□□ -0.64
UPK3A-201ENST00000216211 RPL7L1Q6DKI1 246 aaKnown RBP11.03□□□□□ -0.64
UPK3A-201ENST00000216211 TCF24Q7RTU0 167 aa11.03□□□□□ -0.64
UPK3A-201ENST00000216211 LILRB2Q8N423 598 aa11.03□□□□□ -0.64
UPK3A-201ENST00000216211 OR52E5Q8NH55 327 aa11.03□□□□□ -0.64
UPK3A-201ENST00000216211 GINS3Q9BRX5 216 aa11.03□□□□□ -0.64
UPK3A-201ENST00000216211 CSTL1Q9H114 145 aa11.03□□□□□ -0.64
UPK3A-201ENST00000216211 RBKSQ9H477 322 aa11.03□□□□□ -0.64
UPK3A-201ENST00000216211 BORCS7-ASMTA0A0B4J1R7 106 aa11.02□□□□□ -0.65
UPK3A-201ENST00000216211 IFNA17P01571 189 aa11.02□□□□□ -0.65
UPK3A-201ENST00000216211 SNCAP37840 140 aa11.02□□□□□ -0.65
UPK3A-201ENST00000216211 NPBWR1P48145 328 aa11.02□□□□□ -0.65
UPK3A-201ENST00000216211 TMEM217Q8N7C4 229 aa11.02□□□□□ -0.65
UPK3A-201ENST00000216211 VSIRQ9H7M9 311 aa11.02□□□□□ -0.65
UPK3A-201ENST00000216211 ZFAND3Q9H8U3 227 aa11.02□□□□□ -0.65
UPK3A-201ENST00000216211 WFDC1Q9HC57 220 aa11.02□□□□□ -0.65
UPK3A-201ENST00000216211 PSENENQ9NZ42 101 aa11.02□□□□□ -0.65
UPK3A-201ENST00000216211 PUS1Q9Y606 427 aaKnown RBP eCLIP11.02□□□□□ -0.65
UPK3A-201ENST00000216211 IGHV3-66A0A0C4DH42 116 aa11.01□□□□□ -0.65
UPK3A-201ENST00000216211 NMBP08949 121 aa11.01□□□□□ -0.65
UPK3A-201ENST00000216211 RNASE2P10153 161 aaKnown RBP11.01□□□□□ -0.65
UPK3A-201ENST00000216211 SULT1A1P50225 295 aa11.01□□□□□ -0.65
UPK3A-201ENST00000216211 PAFAH1B2P68402 229 aa11.01□□□□□ -0.65
UPK3A-201ENST00000216211 EIF5AL1Q6IS14 154 aaKnown RBP11.01□□□□□ -0.65
UPK3A-201ENST00000216211 ZNF600Q6ZNG1 722 aa11.01□□□□□ -0.65
UPK3A-201ENST00000216211 LRRC20Q8TCA0 184 aa11.01□□□□□ -0.65
UPK3A-201ENST00000216211 GATAD1Q8WUU5 269 aa11.01□□□□□ -0.65
UPK3A-201ENST00000216211 CIB3Q96Q77 187 aaPredicted RBP11.01□□□□□ -0.65
UPK3A-201ENST00000216211 RARRES2Q99969 163 aa11.01□□□□□ -0.65
UPK3A-201ENST00000216211 SMIM3Q9BZL3 60 aa11.01□□□□□ -0.65
UPK3A-201ENST00000216211 MS4A6AQ9H2W1 248 aa11.01□□□□□ -0.65
UPK3A-201ENST00000216211 KLK5Q9Y337 293 aaPredicted RBP11.01□□□□□ -0.65
UPK3A-201ENST00000216211 AGRNO00468 2067 aa11□□□□□ -0.65
UPK3A-201ENST00000216211 DNAH10Q8IVF4 4471 aa11□□□□□ -0.65
UPK3A-201ENST00000216211 INS-IGF2F8WCM5 200 aa11□□□□□ -0.65
UPK3A-201ENST00000216211 DNASE2O00115 360 aaPredicted RBP11□□□□□ -0.65
UPK3A-201ENST00000216211 DFFBO76075 338 aa11□□□□□ -0.65
UPK3A-201ENST00000216211 IAPPP10997 89 aa11□□□□□ -0.65
UPK3A-201ENST00000216211 HOXA1P49639 335 aaPredicted RBP11□□□□□ -0.65
UPK3A-201ENST00000216211 SPCS3P61009 180 aa11□□□□□ -0.65
UPK3A-201ENST00000216211 STX12Q86Y82 276 aa11□□□□□ -0.65
UPK3A-201ENST00000216211 PHLDA1Q8WV24 401 aaPredicted RBP11□□□□□ -0.65
UPK3A-201ENST00000216211 MED9Q9NWA0 146 aa11□□□□□ -0.65
UPK3A-201ENST00000216211 MRPL36Q9P0J6 103 aaKnown RBP11□□□□□ -0.65
UPK3A-201ENST00000216211 DNAH6Q9C0G6 4158 aa10.99□□□□□ -0.65
UPK3A-201ENST00000216211 CD5P06127 495 aa10.99□□□□□ -0.65
UPK3A-201ENST00000216211 DEFB131AP59861 70 aa10.99□□□□□ -0.65
UPK3A-201ENST00000216211 RPL11P62913 178 aaKnown RBP10.99□□□□□ -0.65
UPK3A-201ENST00000216211 ZNF266Q14584 549 aa10.99□□□□□ -0.65
UPK3A-201ENST00000216211 MLANAQ16655 118 aa10.99□□□□□ -0.65
UPK3A-201ENST00000216211 LEMD1Q68G75 181 aa10.99□□□□□ -0.65
UPK3A-201ENST00000216211 PVRIGQ6DKI7 326 aa10.99□□□□□ -0.65
UPK3A-201ENST00000216211 TMEM14EPQ6UXP3 125 aa10.99□□□□□ -0.65
UPK3A-201ENST00000216211 FAM24BQ8N5W8 94 aa10.99□□□□□ -0.65
UPK3A-201ENST00000216211 OR1S2Q8NGQ3 325 aa10.99□□□□□ -0.65
UPK3A-201ENST00000216211 OR11H2Q8NH07 326 aa10.99□□□□□ -0.65
UPK3A-201ENST00000216211 DTD1Q8TEA8 209 aa10.99□□□□□ -0.65
UPK3A-201ENST00000216211 FNDC4Q9H6D8 234 aaPredicted RBP10.99□□□□□ -0.65
UPK3A-201ENST00000216211 ENY2Q9NPA8 101 aa10.99□□□□□ -0.65
UPK3A-201ENST00000216211 CEBPZOSA8MTT3 80 aa10.98□□□□□ -0.65
UPK3A-201ENST00000216211 CORTO00230 105 aa10.98□□□□□ -0.65
UPK3A-201ENST00000216211 CST7O76096 145 aa10.98□□□□□ -0.65
UPK3A-201ENST00000216211 CA1P00915 261 aaPredicted RBP10.98□□□□□ -0.65
UPK3A-201ENST00000216211 SEC11BP0C7V7 166 aa10.98□□□□□ -0.65
UPK3A-201ENST00000216211 S100A1P23297 94 aa10.98□□□□□ -0.65
UPK3A-201ENST00000216211 OPRK1P41145 380 aa10.98□□□□□ -0.65
UPK3A-201ENST00000216211 SUB1P53999 127 aaKnown RBP eCLIP10.98□□□□□ -0.65
UPK3A-201ENST00000216211 NANOS2P60321 138 aaKnown RBP10.98□□□□□ -0.65
UPK3A-201ENST00000216211 OR5C1Q8NGR4 320 aa10.98□□□□□ -0.65
UPK3A-201ENST00000216211 RNF141Q8WVD5 230 aa10.98□□□□□ -0.65
UPK3A-201ENST00000216211 TMED6Q8WW62 240 aa10.98□□□□□ -0.65
UPK3A-201ENST00000216211 RABAC1Q9UI14 185 aa10.98□□□□□ -0.65
UPK3A-201ENST00000216211 H3BP45 60 aa10.97□□□□□ -0.65
UPK3A-201ENST00000216211 CLN5O75503 358 aa10.97□□□□□ -0.65
UPK3A-201ENST00000216211 NPPCP23582 126 aa10.97□□□□□ -0.65
UPK3A-201ENST00000216211 SPANXN5Q5MJ07 72 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms