RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Samd10Q7TST3 202 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Cdkl3Q8BLF2 595 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 GldnQ8BMF8 549 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 BB014433Q8C5R5 389 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Depp1Q8K2F3 205 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Pphln1Q8K2H1 381 aaKnown RBP3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 C8gQ8VCG4 202 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 HaghQ99KB8 309 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Chchd5Q9CQP3 110 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Tmed5Q9CXE7 229 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Utp11Q9CZJ1 253 aaKnown RBP3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Neurl2Q9D0S4 285 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Fbxo25Q9D2Y6 357 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Tex36Q9D5N9 219 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 PipoxQ9D826 390 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Ropn1lQ9EQ00 218 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Olfr878Q9EQA9 314 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 AgkQ9ESW4 421 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Yipf7Q9JIM5 254 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Pus1Q9WU56 423 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Gm3550W4VSN7 160 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Ighv1-7A0A075B5T7 117 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Gm42543A0A0G2JET4 117 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Olfr1293-psA0A1L1SVB5 326 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Skint2A7XUX6 400 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Zfp563B8JJZ9 448 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Gm17430F6RSK3 157 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 MsmbO08540 113 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Pdlim3O70209 316 aaKnown RBP3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 P01630 113 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 P01728 117 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Csf3P09920 208 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Ccl2P10148 148 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Serpine1P22777 402 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Slc6a1P31648 599 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Cdc42P60766 191 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Htr2bQ02152 479 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Kctd21Q3URF8 260 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Ccdc190Q3URK1 288 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Gm10840Q3V2K9 103 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Trdv4Q5R1A3 115 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Kcnip4Q6PHZ8 250 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Mgat4aQ812G0 535 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Fbxw26Q8BI58 466 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Kctd7Q8BJK1 289 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Tmem252Q8C353 183 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Rnf170Q8CBG9 286 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Lysmd4Q8CC84 293 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 ThtpaQ8JZL3 224 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Scgb2b26Q8JZX1 112 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 PiguQ8K358 434 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Lgi3Q8K406 548 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 CcnqQ8QZR8 250 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Vps37cQ8R105 352 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 RorbQ8R1B8 470 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 OtosQ8R448 89 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Exosc2Q8VBV3 293 aaKnown RBP3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Ccdc115Q8VE99 180 aaKnown RBP3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Olfr1201Q8VGF5 307 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Exosc4Q921I9 245 aaKnown RBP3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Tmem189Q99LQ7 271 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Gins4Q99LZ3 223 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 CygbQ9CX80 190 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Gm17509Q9CZ61 145 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Dimt1Q9D0D4 313 aaKnown RBP3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Mrpl28Q9D1B9 257 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Tlnrd1Q9ERE8 362 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Fgf16Q9ESL8 207 aa3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Ptges3Q9R0Q7 160 aaKnown RBP3.22□□□□□ -1.89
Hmgb1-203ENSMUST00000110505 Olfr573-ps1A0A1B0GRU2 297 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Gm14444A2ARW3 426 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Olfr1124A2AT86 318 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Scgb2b3D2XZ38 112 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Rarres1F6ZIS7 283 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Gm5145F8VQ88 278 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Gm9602J3QPD5 205 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Olfr92L7N475 312 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Tmem178bM0QWJ9 172 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Tcf21O35437 179 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Chst3O88199 472 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 MbP04247 154 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Lyz2P08905 148 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Bcl2P10417 236 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 PpibP24369 216 aaKnown RBP3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Rab7aP51150 207 aaKnown RBP3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Rcn1Q05186 325 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Pate4Q09098 99 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Gm21748Q3UE70 102 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Ccl12Q62401 104 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Rundc3bQ6PDC0 408 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Tfap2eQ6VUP9 442 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 RfflQ6ZQM0 377 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Tas2r3Q7TQA7 316 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Olfr1216Q7TR05 311 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Olfr843Q7TRG4 313 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Olfr479Q7TRV1 327 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 SelenoiQ80TA1 398 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 PimregQ8BFY7 231 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Zfp799Q8BHK4 648 aa3.21□□□□□ -1.9
Hmgb1-203ENSMUST00000110505 Faap24Q8BHL6 221 aa3.21□□□□□ -1.9
Retrieved 100 of 22,080 RNA–protein pairs in 95 ms