RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-231	ENST00000640501	TMUB1	Q9BVT8	246 aa		6.59	□□□□□ -1.35
PNKP-231	ENST00000640501	OSTC	Q9NRP0	149 aa		6.59	□□□□□ -1.35
PNKP-231	ENST00000640501	MOB4	Q9Y3A3	225 aa		6.59	□□□□□ -1.35
PNKP-231	ENST00000640501	NBAS	A2RRP1	2371 aa		6.59	□□□□□ -1.35
PNKP-231	ENST00000640501	NBEA	Q8NFP9	2946 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	SPTBN1	Q01082	2364 aa	Known RBP	6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	ADGRG4	Q8IZF6	3080 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	TRBV9	A0A0B4J1U6	114 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	FBLL1	A6NHQ2	334 aa	Known RBP	6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	GGTLC3	B5MD39	225 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501		J3QLI3	93 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501		K7EIM0	57 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	PEX7	O00628	323 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	ISLR	O14498	428 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	SLC25A5	P05141	298 aa	Known RBP	6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	HIST1H1E	P10412	219 aa	Known RBP	6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	CD24	P25063	80 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	SNRPE	P62304	92 aa	Known RBP	6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	SSBP2	P81877	361 aa	Predicted RBP	6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	TEX38	Q6PEX7	206 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	UNQ5815/PRO19632	Q6UWF5	114 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	ZNF329	Q86UD4	541 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501		Q8N9W7	124 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	NECAP1	Q8NC96	275 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	OCC1	Q8TAD7	63 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	FXYD5	Q96DB9	178 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	ZNF503	Q96F45	646 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	ATG101	Q9BSB4	218 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	FAM103A1	Q9BTL3	118 aa	Known RBP	6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	DERL1	Q9BUN8	251 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	MEGF9	Q9H1U4	602 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	AAMDC	Q9H7C9	122 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	IL36B	Q9NZH7	164 aa		6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	HRNR	Q86YZ3	2850 aa	Predicted RBP	6.58	□□□□□ -1.36
PNKP-231	ENST00000640501	TRBV7-1	A0A0A6YYK4	115 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	IGHV3-21	A0A0B4J1V1	117 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	IGHV7-81	A0A0B4J1V7	117 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	TRAV5	A0A0B4J249	113 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	IGHV4-61	A0A0C4DH41	118 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501		A0A0U1RQK1	487 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	SERTM2	A0A1B0GWG4	89 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	ZNF320	A2RRD8	509 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	BMPR1B	O00238	502 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	NDUFB8	O95169	186 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	MT-ND6	P03923	174 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	TRGC2	P03986	189 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	IL4	P05112	153 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	PYY	P10082	97 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	MGST1	P10620	155 aa	Known RBP	6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	GP9	P14770	177 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	RPL7	P18124	248 aa	Known RBP	6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	RAN	P62826	216 aa	Known RBP	6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	PSG9	Q00887	426 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	FABP9	Q0Z7S8	132 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	PDE6H	Q13956	83 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	TMEM183B	Q1AE95	376 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	IBA57	Q5T440	356 aa	Known RBP	6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	WDR73	Q6P4I2	378 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	DYNAP	Q8N1N2	210 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	ZNF843	Q8N446	348 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	ARL6IP6	Q8N6S5	226 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	BLNK	Q8WV28	456 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	EEF1AKMT3	Q96AZ1	226 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	GPR82	Q96P67	336 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	SHANK2-AS3	Q9BTD1	123 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	C7orf69	Q9H7B7	122 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	OTOR	Q9NRC9	128 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	MRPL36	Q9P0J6	103 aa	Known RBP	6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	MRPL27	Q9P0M9	148 aa	Known RBP	6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	FBXL7	Q9UJT9	491 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	EPDR1	Q9UM22	224 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	ZZEF1	O43149	2961 aa		6.57	□□□□□ -1.36
PNKP-231	ENST00000640501	TRAV40	A0A0B4J280	105 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	WI2-2373I1.2	A0A1W2PRP0	233 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	PGP	A6NDG6	321 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	FAM223B	A6NKX1	122 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501		H3BRN7	92 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501		H3BUA1	57 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	GCG	P01275	180 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	IGKV1-17	P01599	117 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	SMIM6	P0DI80	62 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	CSN1S1	P47710	185 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	MEOX2	P50222	304 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	NDUFA6	P56556	154 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	REL	Q04864	619 aa	Predicted RBP	6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	ECSCR	Q19T08	205 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	CLEC12B	Q2HXU8	276 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	KLK9	Q2XQG4	91 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	FAM209B	Q5JX69	171 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	ZNF600	Q6ZNG1	722 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	FAM231D	Q6ZW35	169 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	BAGE2	Q86Y30	109 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	FAM223A	Q8IWN6	122 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	TEX29	Q8N6K0	151 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	LINC01356	Q8N9X3	169 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	ELOVL1	Q9BW60	279 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	BEX4	Q9NWD9	120 aa	Predicted RBP	6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	RABAC1	Q9UI14	185 aa		6.56	□□□□□ -1.36
PNKP-231	ENST00000640501	KLK9	Q9UKQ9	250 aa		6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms