RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 A0A0G2JNJ9 132 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 IZUMO1RA6ND01 250 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 TBR1Q16650 682 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 TMEM208Q9BTX3 173 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 CHODLQ9H9P2 273 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 Q9UFV3 132 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 A0A1W2PRD5 423 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 A0A1W2PRF3 423 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 A0A1W2PRM7 423 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 TCRBV4S1A1TA0A5B7 111 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 CGB1A6NKQ9 187 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 PLGLAQ15195 96 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 OR5AN1Q8NGI8 311 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 OR1L4Q8NGR5 311 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 CACNG8Q8WXS5 425 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 RNF2Q99496 336 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 CTSZQ9UBR2 303 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 WASHC3Q9Y3C0 194 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 S4R3C0 116 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 ATRXP46100 2492 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 COL6A6A6NMZ7 2263 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 SMIM27A0A1W2PRY6 76 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 PRRG2O14669 202 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 LYZP61626 148 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 VMA21Q3ZAQ7 101 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 GDF5OSQ5U4N7 250 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 C18orf32Q8TCD1 76 aa11.76□□□□□ -0.53
SCARB2-221ENST00000640341 MRPL32Q9BYC8 188 aaKnown RBP11.76□□□□□ -0.53
SCARB2-221ENST00000640341 VSTM2AQ8TAG5 236 aa11.75□□□□□ -0.53
SCARB2-221ENST00000640341 PGLYRP4Q96LB8 373 aa11.75□□□□□ -0.53
SCARB2-221ENST00000640341 C19orf24Q9BVV8 132 aa11.75□□□□□ -0.53
SCARB2-221ENST00000640341 TPPP3Q9BW30 176 aa11.75□□□□□ -0.53
SCARB2-221ENST00000640341 CLEC5AQ9NY25 188 aa11.75□□□□□ -0.53
SCARB2-221ENST00000640341 Q6ZVH6 145 aa11.75□□□□□ -0.53
SCARB2-221ENST00000640341 SPACA3Q8IXA5 215 aa11.75□□□□□ -0.53
SCARB2-221ENST00000640341 ST6GALNAC6Q969X2 333 aa11.75□□□□□ -0.53
SCARB2-221ENST00000640341 C20orf144Q9BQM9 153 aa11.75□□□□□ -0.53
SCARB2-221ENST00000640341 ARHGAP32A7KAX9 2087 aa11.75□□□□□ -0.53
SCARB2-221ENST00000640341 FNDC10F2Z333 226 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 HNRNPA3P51991 378 aaKnown RBP11.74□□□□□ -0.53
SCARB2-221ENST00000640341 Q6ZS92 163 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 CLEC7AQ9BXN2 247 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 TP73-AS1Q9UF72 201 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 ANKHD1Q8IWZ3 2542 aaKnown RBP11.74□□□□□ -0.53
SCARB2-221ENST00000640341 BSNQ9UPA5 3926 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 IGKV1D-37A0A075B6S9 117 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 C22orf46C9J442 243 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 HINT1P49773 126 aaPredicted RBP11.74□□□□□ -0.53
SCARB2-221ENST00000640341 OR4B1Q8NGF8 309 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 FXYD5Q96DB9 178 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 MCRIP2Q9BUT9 160 aaKnown RBP11.74□□□□□ -0.53
SCARB2-221ENST00000640341 TMEM178BH3BS89 294 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 CRYABP02511 175 aaKnown RBP11.74□□□□□ -0.53
SCARB2-221ENST00000640341 RBP4P02753 201 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 NBEAP1P0C6P0 100 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 OR10J3Q5JRS4 329 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 TEX36Q5VZQ5 186 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 ZNF841Q6ZN19 808 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 NIT1Q86X76 327 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 LPAR2Q9HBW0 351 aa11.74□□□□□ -0.53
SCARB2-221ENST00000640341 CSN3P07498 182 aa11.73□□□□□ -0.53
SCARB2-221ENST00000640341 TMEM177Q53S58 311 aa11.73□□□□□ -0.53
SCARB2-221ENST00000640341 TMEM167AQ8TBQ9 72 aa11.73□□□□□ -0.53
SCARB2-221ENST00000640341 C22orf15Q8WYQ4 148 aa11.73□□□□□ -0.53
SCARB2-221ENST00000640341 DAZAP1Q96EP5 407 aaKnown RBP11.73□□□□□ -0.53
SCARB2-221ENST00000640341 GOLT1BQ9Y3E0 138 aa11.73□□□□□ -0.53
SCARB2-221ENST00000640341 DCHS2Q6V1P9 2916 aa11.73□□□□□ -0.53
SCARB2-221ENST00000640341 PSMB11A5LHX3 300 aa11.73□□□□□ -0.53
SCARB2-221ENST00000640341 ESDP10768 282 aa11.73□□□□□ -0.53
SCARB2-221ENST00000640341 GFRALQ6UXV0 394 aa11.73□□□□□ -0.53
SCARB2-221ENST00000640341 LINC00322Q6ZN03 302 aaPredicted RBP11.73□□□□□ -0.53
SCARB2-221ENST00000640341 FAM57AQ8TBR7 257 aa11.73□□□□□ -0.53
SCARB2-221ENST00000640341 COL12A1Q99715 3063 aa11.73□□□□□ -0.53
SCARB2-221ENST00000640341 Q71RC1 249 aaPredicted RBP11.73□□□□□ -0.53
SCARB2-221ENST00000640341 ABHD17AQ96GS6 310 aa11.73□□□□□ -0.53
SCARB2-221ENST00000640341 RBM14Q96PK6 669 aaKnown RBP11.73□□□□□ -0.53
SCARB2-221ENST00000640341 EPDR1Q9UM22 224 aa11.73□□□□□ -0.53
SCARB2-221ENST00000640341 VWC2LB2RUY7 222 aa11.72□□□□□ -0.53
SCARB2-221ENST00000640341 HIST1H1EP10412 219 aaKnown RBP11.72□□□□□ -0.53
SCARB2-221ENST00000640341 ZNF138P52744 262 aa11.72□□□□□ -0.53
SCARB2-221ENST00000640341 TMEM186Q96B77 213 aa11.72□□□□□ -0.53
SCARB2-221ENST00000640341 FBXL15Q9H469 300 aa11.72□□□□□ -0.53
SCARB2-221ENST00000640341 RPL27AP46776 148 aaKnown RBP11.72□□□□□ -0.53
SCARB2-221ENST00000640341 EXOC3-AS1Q8N2X6 119 aa11.72□□□□□ -0.53
SCARB2-221ENST00000640341 Q8N976 141 aa11.72□□□□□ -0.53
SCARB2-221ENST00000640341 PERPQ96FX8 193 aa11.72□□□□□ -0.53
SCARB2-221ENST00000640341 OR8B2Q96RD0 313 aa11.72□□□□□ -0.53
SCARB2-221ENST00000640341 NCOR1P1Q9H4R4 102 aa11.72□□□□□ -0.53
SCARB2-221ENST00000640341 M0QZK8 103 aa11.72□□□□□ -0.53
SCARB2-221ENST00000640341 MEF2CQ06413 473 aaPredicted RBP11.72□□□□□ -0.53
SCARB2-221ENST00000640341 PRR30Q53SZ7 412 aaPredicted RBP11.72□□□□□ -0.53
SCARB2-221ENST00000640341 ERASQ7Z444 233 aa11.72□□□□□ -0.53
SCARB2-221ENST00000640341 C11orf42Q8N5U0 333 aa11.72□□□□□ -0.53
SCARB2-221ENST00000640341 INSIG2Q9Y5U4 225 aa11.72□□□□□ -0.53
SCARB2-221ENST00000640341 ARL2-SNX15V9GYD0 113 aa11.72□□□□□ -0.53
SCARB2-221ENST00000640341 HYPMO75409 117 aa11.71□□□□□ -0.53
SCARB2-221ENST00000640341 IGLV2-23P01705 113 aa11.71□□□□□ -0.53
SCARB2-221ENST00000640341 P01737 135 aa11.71□□□□□ -0.53
SCARB2-221ENST00000640341 LOXP28300 417 aaPredicted RBP11.71□□□□□ -0.53
SCARB2-221ENST00000640341 CEACAM8P31997 349 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms