RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 PUSL1Q8N0Z8 303 aaKnown RBP4.47□□□□□ -1.69
CHD2-227ENST00000637572 FAM110DQ8TAY7 271 aaPredicted RBP4.47□□□□□ -1.69
CHD2-227ENST00000637572 GPR61Q9BZJ8 451 aa4.47□□□□□ -1.69
CHD2-227ENST00000637572 FGF23Q9GZV9 251 aaPredicted RBP4.47□□□□□ -1.69
CHD2-227ENST00000637572 DCAF16Q9NXF7 216 aa4.47□□□□□ -1.69
CHD2-227ENST00000637572 OR2T8A6NH00 312 aa4.46□□□□□ -1.69
CHD2-227ENST00000637572 HOXA4Q00056 320 aaPredicted RBP4.46□□□□□ -1.69
CHD2-227ENST00000637572 SMAGPQ0VAQ4 97 aa4.46□□□□□ -1.69
CHD2-227ENST00000637572 MST1LQ2TV78 715 aa4.46□□□□□ -1.69
CHD2-227ENST00000637572 AWAT1Q58HT5 328 aa4.46□□□□□ -1.69
CHD2-227ENST00000637572 PRSS57Q6UWY2 283 aa4.46□□□□□ -1.69
CHD2-227ENST00000637572 BIVMQ86UB2 503 aa4.46□□□□□ -1.69
CHD2-227ENST00000637572 FAM210BQ96KR6 192 aa4.46□□□□□ -1.69
CHD2-227ENST00000637572 ARL2-SNX15V9GYD0 113 aa4.46□□□□□ -1.69
CHD2-227ENST00000637572 TRAV1-1A0A0B4J248 108 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 IGHV4-39P01824 125 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 ZNF137PP52743 207 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 BRD3OSQ6XYD6 125 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 CYB561D1Q8N8Q1 229 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 MBD3L1Q8WWY6 194 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 SH3BGRL3Q9H299 93 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 OTORQ9NRC9 128 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 CTSZQ9UBR2 303 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 TRAPPC1Q9Y5R8 145 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 EYSQ5T1H1 3165 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 C7orf77A4D0Y5 90 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 NDUFB4O95168 129 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 HLA-DRB1P01911 266 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 TREML4Q6UXN2 200 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 SYT8Q8NBV8 401 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 DUX5Q96PT3 197 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 FAM103A1Q9BTL3 118 aaKnown RBP4.46□□□□□ -1.7
CHD2-227ENST00000637572 NAT8BQ9UHF3 227 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 RNF114Q9Y508 228 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 A0A087X0M5 115 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 A0A1B0GX30 115 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 WISP2O76076 250 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 RAB4AP20338 218 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 TFF3Q07654 80 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 PRNTQ86SH4 94 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 WFDC3Q8IUB2 231 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 EIF4E3Q8N5X7 224 aaKnown RBP4.46□□□□□ -1.7
CHD2-227ENST00000637572 TMEM18Q96B42 140 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 NDUFA4L2Q9NRX3 87 aa4.46□□□□□ -1.7
CHD2-227ENST00000637572 COL6A5A8TX70 2615 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 TMEM189A5PLL7 270 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 NPIPB5A8MRT5 1133 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 DUSP14O95147 198 aaKnown RBP4.45□□□□□ -1.7
CHD2-227ENST00000637572 IGKV1-16P04430 117 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 RNASE2P10153 161 aaKnown RBP4.45□□□□□ -1.7
CHD2-227ENST00000637572 CD24P25063 80 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 C15orf32Q32M92 178 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 SMUG1Q53HV7 270 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 FMC1Q96HJ9 113 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 ZNF586Q9NXT0 402 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 ASH1LQ9NR48 2969 aaKnown RBP4.45□□□□□ -1.7
CHD2-227ENST00000637572 OR4C46A6NHA9 309 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 NDUFB8O95169 186 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 LOXL1Q08397 574 aaPredicted RBP4.45□□□□□ -1.7
CHD2-227ENST00000637572 IBA57Q5T440 356 aaKnown RBP4.45□□□□□ -1.7
CHD2-227ENST00000637572 FA2HQ7L5A8 372 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 DDB2Q92466 427 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 LINC00574Q9H8X3 128 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 NAGKQ9UJ70 344 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 CHD9Q3L8U1 2897 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 IGKV3-7A0A075B6H7 116 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 ZNF705FA8MVS1 300 aaPredicted RBP4.45□□□□□ -1.7
CHD2-227ENST00000637572 A8MXK9 166 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 FCN1O00602 326 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 ZNF705DP0CH99 300 aaPredicted RBP4.45□□□□□ -1.7
CHD2-227ENST00000637572 ZNF705BP0CI00 300 aaPredicted RBP4.45□□□□□ -1.7
CHD2-227ENST00000637572 PAX1P15863 534 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 PAX6P26367 422 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 NDUFA6P56556 154 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 RNF212Q495C1 297 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 Q6AWC8 147 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 LYPD1Q8N2G4 141 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 OR2D3Q8NGH3 330 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 AGMATQ9BSE5 352 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 GGTLC1Q9BX51 225 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 TP53BP1Q12888 1972 aaPredicted RBP4.45□□□□□ -1.7
CHD2-227ENST00000637572 TEX15Q9BXT5 2789 aa4.45□□□□□ -1.7
CHD2-227ENST00000637572 FAM3BP58499 235 aaPredicted RBP4.44□□□□□ -1.7
CHD2-227ENST00000637572 YPEL3P61236 119 aaPredicted RBP4.44□□□□□ -1.7
CHD2-227ENST00000637572 OR10W1Q8NGF6 305 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 EML5Q05BV3 1969 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 WIPF3A6NGB9 483 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 C15orf62A8K5M9 175 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 HSBP1O75506 76 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 TOMM40O96008 361 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 ELANEP08246 267 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 ANOS1P23352 680 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 TMEM249Q2WGJ8 235 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 DUX4L9Q6RFH8 374 aaPredicted RBP4.44□□□□□ -1.7
CHD2-227ENST00000637572 SIGLECL1Q8N7X8 197 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 SGMS2Q8NHU3 365 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 NOL4LQ96MY1 436 aaPredicted RBP4.44□□□□□ -1.7
CHD2-227ENST00000637572 MALRD1Q5VYJ5 2156 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 IGHV4-61A0A0C4DH41 118 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 A0A1B0GW64 132 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms