RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 TCF24Q7RTU0 167 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 OR9G1Q8NH87 305 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 MRPL32Q9BYC8 188 aaKnown RBP7.07□□□□□ -1.28
VCL-207ENST00000624354 WNK2Q9Y3S1 2297 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 TET2Q6N021 2002 aaPredicted RBP7.07□□□□□ -1.28
VCL-207ENST00000624354 TEX50A0A1B0GTY4 177 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 IZUMO1RA6ND01 250 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 IGKV1-16P04430 117 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 UBE2L3P68036 154 aaKnown RBP7.07□□□□□ -1.28
VCL-207ENST00000624354 OR1L8Q8NGR8 309 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 IGF2BP2-AS1Q96M15 143 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 CHRDL1Q9BU40 450 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 TMEM70Q9BUB7 260 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 COMMD5Q9GZQ3 224 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 C2orf70A6NJV1 201 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 M0R1B8 84 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 CD69Q07108 199 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 MLANAQ16655 118 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 FDCSPQ8NFU4 85 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 AP1S3Q96PC3 154 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 RNF7Q9UBF6 113 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 TIMM8BQ9Y5J9 83 aaPredicted RBP7.07□□□□□ -1.28
VCL-207ENST00000624354 PKD1L2Q7Z442 2459 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 TRAV17A0A0B4J275 112 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 SRRM4A7MD48 611 aaKnown RBP7.06□□□□□ -1.28
VCL-207ENST00000624354 NKX2-8O15522 239 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 GNG7O60262 68 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 GOSR1O95249 250 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 CA1P00915 261 aaPredicted RBP7.06□□□□□ -1.28
VCL-207ENST00000624354 CT45A6P0DMU7 189 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 CT45A5P0DMU8 189 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 CT45A7P0DMV0 189 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 RNASE2P10153 161 aaKnown RBP7.06□□□□□ -1.28
VCL-207ENST00000624354 GLRXP35754 106 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 LGALS7P47929 136 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 NHLRC2Q8NBF2 726 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 DEFB108BQ8NET1 73 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 OR1N2Q8NGR9 330 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 SAA1P0DJI8 122 aaPredicted RBP7.06□□□□□ -1.28
VCL-207ENST00000624354 ERHP84090 104 aaKnown RBP7.06□□□□□ -1.28
VCL-207ENST00000624354 DUX4L9Q6RFH8 374 aaPredicted RBP7.06□□□□□ -1.28
VCL-207ENST00000624354 RASL11AQ6T310 242 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 C5orf17Q8NAS9 161 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 CACNG8Q8WXS5 425 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 ZC2HC1AQ96GY0 325 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 MYO18BQ8IUG5 2567 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 hDV102S1A0JD36 115 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 C7orf71A4D174 169 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 SLAQ13239 276 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 TMEM30BQ3MIR4 351 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 TMEM108Q6UXF1 575 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 SLC25A48Q6ZT89 311 aaKnown RBP7.06□□□□□ -1.28
VCL-207ENST00000624354 SPATA12Q7Z6I5 190 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 FAM222BQ8WU58 562 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 SSBP3Q9BWW4 388 aaPredicted RBP7.06□□□□□ -1.28
VCL-207ENST00000624354 CLEC5AQ9NY25 188 aa7.06□□□□□ -1.28
VCL-207ENST00000624354 RALYQ9UKM9 306 aaKnown RBP7.06□□□□□ -1.28
VCL-207ENST00000624354 AMMECR1Q9Y4X0 333 aaPredicted RBP7.06□□□□□ -1.28
VCL-207ENST00000624354 TRAV5A0A0B4J249 113 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 MFAP2P55001 183 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 ZNF841Q6ZN19 808 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 KIR3DL3Q8N743 410 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 OR10W1Q8NGF6 305 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 OR2T6Q8NHC8 308 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 RND1Q92730 232 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 CCL13Q99616 98 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 FNDC4Q9H6D8 234 aaPredicted RBP7.05□□□□□ -1.28
VCL-207ENST00000624354 SAP30LQ9HAJ7 183 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 TNFRSF19Q9NS68 423 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 RPUSD1Q9UJJ7 312 aaKnown RBP7.05□□□□□ -1.28
VCL-207ENST00000624354 FAM208BQ5VWN6 2430 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 FAM231BA6NCW3 169 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 TM4SF5O14894 197 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 COX7A2P2O60397 106 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 APOA2P02652 100 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 GATA4P43694 442 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 HIST1H1AQ02539 215 aaPredicted RBP7.05□□□□□ -1.28
VCL-207ENST00000624354 PRSS57Q6UWY2 283 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 FAM168AQ92567 244 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 FAM167A-AS1Q96KT0 104 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 LINC00479Q96M42 142 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 SLC25A2Q9BXI2 301 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 ZNF355PQ9NSJ1 428 aa7.05□□□□□ -1.28
VCL-207ENST00000624354 A0A087X0K7 114 aa7.04□□□□□ -1.28
VCL-207ENST00000624354 TNFAIP6P98066 277 aaPredicted RBP7.04□□□□□ -1.28
VCL-207ENST00000624354 TIMM23BQ5SRD1 257 aa7.04□□□□□ -1.28
VCL-207ENST00000624354 MORN5Q5VZ52 161 aa7.04□□□□□ -1.28
VCL-207ENST00000624354 FAM231DQ6ZW35 169 aa7.04□□□□□ -1.28
VCL-207ENST00000624354 SPACA3Q8IXA5 215 aa7.04□□□□□ -1.28
VCL-207ENST00000624354 OR1L4Q8NGR5 311 aa7.04□□□□□ -1.28
VCL-207ENST00000624354 OSR1Q8TAX0 266 aaPredicted RBP7.04□□□□□ -1.28
VCL-207ENST00000624354 WIPF2Q8TF74 440 aaPredicted RBP7.04□□□□□ -1.28
VCL-207ENST00000624354 HARBI1Q96MB7 349 aa7.04□□□□□ -1.28
VCL-207ENST00000624354 ZNF714Q96N38 554 aa7.04□□□□□ -1.28
VCL-207ENST00000624354 GAFA1Q96PS6 74 aa7.04□□□□□ -1.28
VCL-207ENST00000624354 PAXXQ9BUH6 204 aa7.04□□□□□ -1.28
VCL-207ENST00000624354 DKK4Q9UBT3 224 aa7.04□□□□□ -1.28
VCL-207ENST00000624354 IGLV3-9A0A075B6K5 115 aa7.04□□□□□ -1.28
VCL-207ENST00000624354 A0A1B0GV72 72 aa7.04□□□□□ -1.28
VCL-207ENST00000624354 hADV38S2A0JD32 116 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms