RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 LINC00479Q96M42 142 aa10.89□□□□□ -0.67
COL1A2-213ENST00000620463 M0R381 172 aa10.89□□□□□ -0.67
COL1A2-213ENST00000620463 VWC2Q2TAL6 325 aa10.89□□□□□ -0.67
COL1A2-213ENST00000620463 GAGE12JA6NER3 117 aa10.89□□□□□ -0.67
COL1A2-213ENST00000620463 C15orf61A6NNL5 157 aa10.89□□□□□ -0.67
COL1A2-213ENST00000620463 GAGE7O76087 117 aa10.89□□□□□ -0.67
COL1A2-213ENST00000620463 GAGE12FP0CL80 117 aa10.89□□□□□ -0.67
COL1A2-213ENST00000620463 GAGE12GP0CL81 117 aa10.89□□□□□ -0.67
COL1A2-213ENST00000620463 GAGE12IP0CL82 117 aa10.89□□□□□ -0.67
COL1A2-213ENST00000620463 NTF4P34130 210 aa10.89□□□□□ -0.67
COL1A2-213ENST00000620463 GAGE4Q13068 117 aa10.89□□□□□ -0.67
COL1A2-213ENST00000620463 AMTNQ6UX39 209 aa10.89□□□□□ -0.67
COL1A2-213ENST00000620463 VGLL1Q99990 258 aa10.89□□□□□ -0.67
COL1A2-213ENST00000620463 ERG28Q9UKR5 140 aa10.89□□□□□ -0.67
COL1A2-213ENST00000620463 ANAPC10Q9UM13 185 aa10.89□□□□□ -0.67
COL1A2-213ENST00000620463 ANXA2RQ3ZCQ2 193 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 C9orf153Q5TBE3 101 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 BOD1L2Q8IYS8 172 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 SLC22A18ASQ8N1D0 253 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 SCRT1Q9BWW7 348 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 LIME1Q9H400 295 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 CRYBA4P53673 196 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 CD69Q07108 199 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 DEFB109BQ30KR1 87 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 PPDPFLQ8WWR9 84 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 OTORQ9NRC9 128 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 RNF115Q9Y4L5 304 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 CREBBPQ92793 2442 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 NOTCH3Q9UM47 2321 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 TRAV2A0A0B4J234 112 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 NKX2-8O15522 239 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 KLF14Q8TD94 323 aaPredicted RBP10.88□□□□□ -0.67
COL1A2-213ENST00000620463 V9GYV3 84 aa10.88□□□□□ -0.67
COL1A2-213ENST00000620463 RNASE1P07998 156 aaKnown RBP10.87□□□□□ -0.67
COL1A2-213ENST00000620463 PRB4P10163 310 aaPredicted RBP10.87□□□□□ -0.67
COL1A2-213ENST00000620463 SPACA3Q8IXA5 215 aa10.87□□□□□ -0.67
COL1A2-213ENST00000620463 ITLN1Q8WWA0 313 aa10.87□□□□□ -0.67
COL1A2-213ENST00000620463 C1orf147Q96MC9 270 aaPredicted RBP10.87□□□□□ -0.67
COL1A2-213ENST00000620463 IGHV3-35A0A0C4DH35 117 aa10.87□□□□□ -0.67
COL1A2-213ENST00000620463 WIPF3A6NGB9 483 aa10.87□□□□□ -0.67
COL1A2-213ENST00000620463 TNFRSF6BO95407 300 aa10.87□□□□□ -0.67
COL1A2-213ENST00000620463 MEIG1Q5JSS6 88 aa10.87□□□□□ -0.67
COL1A2-213ENST00000620463 ZNF497Q6ZNH5 498 aa10.87□□□□□ -0.67
COL1A2-213ENST00000620463 PSG8Q9UQ74 426 aa10.87□□□□□ -0.67
COL1A2-213ENST00000620463 C15orf62A8K5M9 175 aa10.87□□□□□ -0.67
COL1A2-213ENST00000620463 C9JAW5 83 aa10.87□□□□□ -0.67
COL1A2-213ENST00000620463 PPIFP30405 207 aaKnown RBP10.87□□□□□ -0.67
COL1A2-213ENST00000620463 IGHV1-24A0A0C4DH33 117 aa10.87□□□□□ -0.67
COL1A2-213ENST00000620463 C16orf92Q96LL3 132 aa10.87□□□□□ -0.67
COL1A2-213ENST00000620463 NPIPB11E5RHQ5 1161 aa10.86□□□□□ -0.67
COL1A2-213ENST00000620463 IFI27P40305 119 aaPredicted RBP10.86□□□□□ -0.67
COL1A2-213ENST00000620463 OSR1Q8TAX0 266 aaPredicted RBP10.86□□□□□ -0.67
COL1A2-213ENST00000620463 EDA2RQ9HAV5 297 aa10.86□□□□□ -0.67
COL1A2-213ENST00000620463 GTF3C1Q12789 2109 aa10.86□□□□□ -0.67
COL1A2-213ENST00000620463 CD24P25063 80 aa10.86□□□□□ -0.67
COL1A2-213ENST00000620463 DUTP33316 252 aaKnown RBP10.86□□□□□ -0.67
COL1A2-213ENST00000620463 CCL8P80075 99 aa10.86□□□□□ -0.67
COL1A2-213ENST00000620463 SRSF7Q16629 238 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL1A2-213ENST00000620463 IGHV5-10-1A0A0J9YXX1 117 aa10.86□□□□□ -0.67
COL1A2-213ENST00000620463 TAX1BP3O14907 124 aa10.86□□□□□ -0.67
COL1A2-213ENST00000620463 TIAF1O95411 115 aa10.86□□□□□ -0.67
COL1A2-213ENST00000620463 CCL4P13236 92 aa10.86□□□□□ -0.67
COL1A2-213ENST00000620463 FAM74A4Q5TZK3 123 aa10.86□□□□□ -0.67
COL1A2-213ENST00000620463 ZC2HC1AQ96GY0 325 aa10.86□□□□□ -0.67
COL1A2-213ENST00000620463 MLNRO43193 412 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 TMPRSS3P57727 454 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 FER1L5A0AVI2 2057 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 IGKV3D-11A0A0A0MRZ8 115 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 K7ERJ3 54 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 MFAP4P55083 255 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 PAPPA-AS1Q5QFB9 102 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 ACP7Q6ZNF0 438 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 TOMM40O96008 361 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 SRSF1Q07955 248 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL1A2-213ENST00000620463 SH2D6Q7Z4S9 175 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 PNRC2Q9NPJ4 139 aaKnown RBP10.85□□□□□ -0.67
COL1A2-213ENST00000620463 CADP27708 2225 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 LCTP09848 1927 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 ANK1P16157 1881 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 TCRBV4S1A1TA0A5B7 111 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 EPOPA6NHQ4 379 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 IGLC1P0CG04 106 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 FOXC1Q12948 553 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 OR10J6PQ8NGY7 276 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 CT55Q8WUE5 264 aa10.85□□□□□ -0.67
COL1A2-213ENST00000620463 PATJQ8NI35 1801 aa10.84□□□□□ -0.67
COL1A2-213ENST00000620463 IFITM1P13164 125 aa10.84□□□□□ -0.67
COL1A2-213ENST00000620463 SRSF6Q13247 344 aaKnown RBP10.84□□□□□ -0.67
COL1A2-213ENST00000620463 ECSCRQ19T08 205 aa10.84□□□□□ -0.67
COL1A2-213ENST00000620463 C2orf82Q6UX34 121 aa10.84□□□□□ -0.67
COL1A2-213ENST00000620463 LHFPL4Q7Z7J7 247 aa10.84□□□□□ -0.67
COL1A2-213ENST00000620463 NPIPB6E9PJ23 425 aa10.84□□□□□ -0.67
COL1A2-213ENST00000620463 EBLN2Q6P2I7 272 aa10.84□□□□□ -0.67
COL1A2-213ENST00000620463 SBF1O95248 1867 aa10.84□□□□□ -0.67
COL1A2-213ENST00000620463 TRBV20-1A0A075B6N2 111 aa10.84□□□□□ -0.67
COL1A2-213ENST00000620463 C21orf140B9A014 251 aa10.84□□□□□ -0.67
COL1A2-213ENST00000620463 UPK2O00526 184 aa10.84□□□□□ -0.67
COL1A2-213ENST00000620463 PLAURQ03405 335 aa10.84□□□□□ -0.67
COL1A2-213ENST00000620463 LINC01559Q495D7 138 aa10.84□□□□□ -0.67
COL1A2-213ENST00000620463 NPFFR1Q9GZQ6 430 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms