RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 Q8N1X5 172 aa16.48■□□□□ 0.23
MMP28-203ENST00000612672 OR13C8Q8NGS7 320 aa16.48■□□□□ 0.23
MMP28-203ENST00000612672 OR52E5Q8NH55 327 aa16.48■□□□□ 0.23
MMP28-203ENST00000612672 ZNRF2Q8NHG8 242 aa16.48■□□□□ 0.23
MMP28-203ENST00000612672 RNASEH2CQ8TDP1 164 aaKnown RBP16.48■□□□□ 0.23
MMP28-203ENST00000612672 GPR146Q96CH1 333 aa16.48■□□□□ 0.23
MMP28-203ENST00000612672 NBDYA0A0U1RRE5 68 aa16.47■□□□□ 0.23
MMP28-203ENST00000612672 HPGDSO60760 199 aa16.47■□□□□ 0.23
MMP28-203ENST00000612672 ATG12O94817 140 aa16.47■□□□□ 0.23
MMP28-203ENST00000612672 RORCP51449 518 aa16.47■□□□□ 0.23
MMP28-203ENST00000612672 RNASE11Q8TAA1 199 aaKnown RBP16.47■□□□□ 0.23
MMP28-203ENST00000612672 CLUHP3Q96NS8 147 aa16.47■□□□□ 0.23
MMP28-203ENST00000612672 CACNG5Q9UF02 275 aa16.47■□□□□ 0.23
MMP28-203ENST00000612672 GSTZ1O43708 216 aaPredicted RBP16.46■□□□□ 0.23
MMP28-203ENST00000612672 OR5AC1P0C628 307 aa16.46■□□□□ 0.23
MMP28-203ENST00000612672 DAD1P61803 113 aa16.46■□□□□ 0.23
MMP28-203ENST00000612672 MEF2DQ14814 521 aa16.46■□□□□ 0.23
MMP28-203ENST00000612672 RNASE10Q5GAN6 216 aaKnown RBP16.46■□□□□ 0.23
MMP28-203ENST00000612672 RNF125Q96EQ8 232 aa16.46■□□□□ 0.23
MMP28-203ENST00000612672 COPZ2Q9P299 210 aa16.46■□□□□ 0.23
MMP28-203ENST00000612672 CDS2O95674 445 aa16.45■□□□□ 0.22
MMP28-203ENST00000612672 HBE1P02100 147 aa16.45■□□□□ 0.22
MMP28-203ENST00000612672 FAM78BQ5VT40 261 aa16.45■□□□□ 0.22
MMP28-203ENST00000612672 C6orf223Q8N319 242 aa16.45■□□□□ 0.22
MMP28-203ENST00000612672 OR52I2Q8NH67 350 aa16.45■□□□□ 0.22
MMP28-203ENST00000612672 MARCH1Q8TCQ1 289 aa16.45■□□□□ 0.22
MMP28-203ENST00000612672 GLYATL2Q8WU03 294 aa16.45■□□□□ 0.22
MMP28-203ENST00000612672 C20orf173Q96LM9 149 aa16.45■□□□□ 0.22
MMP28-203ENST00000612672 PBDC1Q9BVG4 233 aa16.45■□□□□ 0.22
MMP28-203ENST00000612672 TMEM222Q9H0R3 208 aa16.45■□□□□ 0.22
MMP28-203ENST00000612672 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.45■□□□□ 0.22
MMP28-203ENST00000612672 GOLT1BQ9Y3E0 138 aa16.45■□□□□ 0.22
MMP28-203ENST00000612672 MYCBP2O75592 4640 aa16.44■□□□□ 0.22
MMP28-203ENST00000612672 IGKV1D-37A0A075B6S9 117 aa16.44■□□□□ 0.22
MMP28-203ENST00000612672 PSMB3P49720 205 aa16.44■□□□□ 0.22
MMP28-203ENST00000612672 PAX9P55771 341 aa16.44■□□□□ 0.22
MMP28-203ENST00000612672 PSG9Q00887 426 aa16.44■□□□□ 0.22
MMP28-203ENST00000612672 SELENOHQ8IZQ5 122 aaKnown RBP16.44■□□□□ 0.22
MMP28-203ENST00000612672 ARRDC1Q8N5I2 433 aa16.44■□□□□ 0.22
MMP28-203ENST00000612672 C17orf77Q96MU5 243 aa16.44■□□□□ 0.22
MMP28-203ENST00000612672 TMED3Q9Y3Q3 217 aa16.44■□□□□ 0.22
MMP28-203ENST00000612672 A0A0J9YX75 114 aa16.43■□□□□ 0.22
MMP28-203ENST00000612672 SMIM31A0A1B0GVY4 71 aa16.43■□□□□ 0.22
MMP28-203ENST00000612672 CEBPZOSA8MTT3 80 aa16.43■□□□□ 0.22
MMP28-203ENST00000612672 FAM3BP58499 235 aaPredicted RBP16.43■□□□□ 0.22
MMP28-203ENST00000612672 NCS1P62166 190 aa16.43■□□□□ 0.22
MMP28-203ENST00000612672 ZNF90Q03938 601 aa16.43■□□□□ 0.22
MMP28-203ENST00000612672 RRN3P1Q2M238 152 aa16.43■□□□□ 0.22
MMP28-203ENST00000612672 NMSQ5H8A3 153 aa16.43■□□□□ 0.22
MMP28-203ENST00000612672 AMTNQ6UX39 209 aa16.43■□□□□ 0.22
MMP28-203ENST00000612672 C7orf50Q9BRJ6 194 aaKnown RBP16.43■□□□□ 0.22
MMP28-203ENST00000612672 SCRT2Q9NQ03 307 aa16.43■□□□□ 0.22
MMP28-203ENST00000612672 VPS13BQ7Z7G8 4022 aa16.42■□□□□ 0.22
MMP28-203ENST00000612672 FAM219AQ8IW50 185 aa16.42■□□□□ 0.22
MMP28-203ENST00000612672 CCDC71LQ8N9Z2 235 aa16.42■□□□□ 0.22
MMP28-203ENST00000612672 C15orf53Q8NAA6 179 aa16.42■□□□□ 0.22
MMP28-203ENST00000612672 COQ8AQ8NI60 647 aa16.42■□□□□ 0.22
MMP28-203ENST00000612672 RTBDNQ9BSG5 229 aaPredicted RBP16.42■□□□□ 0.22
MMP28-203ENST00000612672 Q9H521 79 aa16.42■□□□□ 0.22
MMP28-203ENST00000612672 A8MTW9 85 aa16.41■□□□□ 0.22
MMP28-203ENST00000612672 ATP6V1G2O95670 118 aa16.41■□□□□ 0.22
MMP28-203ENST00000612672 FAAP20Q6NZ36 180 aa16.41■□□□□ 0.22
MMP28-203ENST00000612672 TERB2Q8NHR7 220 aa16.41■□□□□ 0.22
MMP28-203ENST00000612672 RBPMSQ93062 196 aaKnown RBP16.41■□□□□ 0.22
MMP28-203ENST00000612672 ATG101Q9BSB4 218 aa16.41■□□□□ 0.22
MMP28-203ENST00000612672 SCGB2B2Q4G0G5 96 aa16.4■□□□□ 0.22
MMP28-203ENST00000612672 ZFAND1Q8TCF1 268 aa16.4■□□□□ 0.22
MMP28-203ENST00000612672 PRR13Q9NZ81 148 aa16.4■□□□□ 0.22
MMP28-203ENST00000612672 MTFP1Q9UDX5 166 aa16.4■□□□□ 0.22
MMP28-203ENST00000612672 ZNF705GA8MUZ8 300 aaPredicted RBP16.39■□□□□ 0.21
MMP28-203ENST00000612672 ID1P41134 155 aa16.39■□□□□ 0.21
MMP28-203ENST00000612672 SUPT4H1P63272 117 aaKnown RBP16.39■□□□□ 0.21
MMP28-203ENST00000612672 OR8G2PQ6IF36 304 aa16.39■□□□□ 0.21
MMP28-203ENST00000612672 ETFRF1Q6IPR1 90 aa16.39■□□□□ 0.21
MMP28-203ENST00000612672 SPATA12Q7Z6I5 190 aa16.39■□□□□ 0.21
MMP28-203ENST00000612672 KRTAP1-5Q9BYS1 174 aa16.39■□□□□ 0.21
MMP28-203ENST00000612672 MAGT1Q9H0U3 335 aa16.39■□□□□ 0.21
MMP28-203ENST00000612672 NAA60Q9H7X0 242 aa16.39■□□□□ 0.21
MMP28-203ENST00000612672 LINC00588Q9Y4M8 146 aa16.39■□□□□ 0.21
MMP28-203ENST00000612672 DMBT1Q9UGM3 2413 aaPredicted RBP16.39■□□□□ 0.21
MMP28-203ENST00000612672 TEX13DA0A0J9YY54 714 aaPredicted RBP16.38■□□□□ 0.21
MMP28-203ENST00000612672 PLAC8L1A1L4L8 177 aa16.38■□□□□ 0.21
MMP28-203ENST00000612672 CRXO43186 299 aaPredicted RBP16.38■□□□□ 0.21
MMP28-203ENST00000612672 KRTAP10-2P60368 255 aa16.38■□□□□ 0.21
MMP28-203ENST00000612672 LYZP61626 148 aa16.38■□□□□ 0.21
MMP28-203ENST00000612672 VBP1P61758 197 aa16.38■□□□□ 0.21
MMP28-203ENST00000612672 FCN2Q15485 313 aa16.38■□□□□ 0.21
MMP28-203ENST00000612672 TMEM268Q5VZI3 342 aa16.38■□□□□ 0.21
MMP28-203ENST00000612672 ABHD1Q96SE0 405 aa16.38■□□□□ 0.21
MMP28-203ENST00000612672 GAMTQ14353 236 aa16.37■□□□□ 0.21
MMP28-203ENST00000612672 IGF2BP2-AS1Q96M15 143 aa16.37■□□□□ 0.21
MMP28-203ENST00000612672 ISLRO14498 428 aa16.36■□□□□ 0.21
MMP28-203ENST00000612672 B3GALNT1O75752 331 aa16.36■□□□□ 0.21
MMP28-203ENST00000612672 NUDT3O95989 172 aa16.36■□□□□ 0.21
MMP28-203ENST00000612672 TBPP20226 339 aa16.36■□□□□ 0.21
MMP28-203ENST00000612672 ALDH3B2P48448 385 aa16.36■□□□□ 0.21
MMP28-203ENST00000612672 KLF9Q13886 244 aaPredicted RBP16.36■□□□□ 0.21
MMP28-203ENST00000612672 SPATA31B1PQ5VZV4 182 aa16.36■□□□□ 0.21
MMP28-203ENST00000612672 EBLN2Q6P2I7 272 aa16.36■□□□□ 0.21
MMP28-203ENST00000612672 DOK5Q9P104 306 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms