RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 M6PRP20645 277 aa14.36□□□□□ -0.11
SSBP4-212ENST00000601919 S100A7P31151 101 aa14.36□□□□□ -0.11
SSBP4-212ENST00000601919 SULT1A2P50226 295 aa14.36□□□□□ -0.11
SSBP4-212ENST00000601919 IFITM2Q01629 132 aa14.36□□□□□ -0.11
SSBP4-212ENST00000601919 TCTEX1D4Q5JR98 221 aa14.36□□□□□ -0.11
SSBP4-212ENST00000601919 S100A7AQ86SG5 101 aa14.36□□□□□ -0.11
SSBP4-212ENST00000601919 OR1L4Q8NGR5 311 aa14.36□□□□□ -0.11
SSBP4-212ENST00000601919 C4orf3Q8WVX3 66 aa14.36□□□□□ -0.11
SSBP4-212ENST00000601919 PFDN5Q99471 154 aa14.36□□□□□ -0.11
SSBP4-212ENST00000601919 CHRDL1Q9BU40 450 aa14.36□□□□□ -0.11
SSBP4-212ENST00000601919 TSSC4Q9Y5U2 329 aaPredicted RBP14.36□□□□□ -0.11
SSBP4-212ENST00000601919 PPP5D1E7EU14 171 aa14.35□□□□□ -0.11
SSBP4-212ENST00000601919 CD28P10747 220 aa14.35□□□□□ -0.11
SSBP4-212ENST00000601919 GATA2P23769 480 aaPredicted RBP14.35□□□□□ -0.11
SSBP4-212ENST00000601919 ADMP35318 185 aa14.35□□□□□ -0.11
SSBP4-212ENST00000601919 OR5B12Q96R08 314 aa14.35□□□□□ -0.11
SSBP4-212ENST00000601919 RNF2Q99496 336 aa14.35□□□□□ -0.11
SSBP4-212ENST00000601919 RFNGQ9Y644 331 aa14.35□□□□□ -0.11
SSBP4-212ENST00000601919 ELOA3CA0A087WX78 387 aaPredicted RBP14.34□□□□□ -0.11
SSBP4-212ENST00000601919 NUDT19A8MXV4 375 aa14.34□□□□□ -0.11
SSBP4-212ENST00000601919 RGS13O14921 159 aa14.34□□□□□ -0.11
SSBP4-212ENST00000601919 COX7A2P2O60397 106 aa14.34□□□□□ -0.11
SSBP4-212ENST00000601919 HYPMO75409 117 aa14.34□□□□□ -0.11
SSBP4-212ENST00000601919 OR2C1O95371 312 aa14.34□□□□□ -0.11
SSBP4-212ENST00000601919 HSPB1P04792 205 aaKnown RBP14.34□□□□□ -0.11
SSBP4-212ENST00000601919 PLP1P60201 277 aa14.34□□□□□ -0.11
SSBP4-212ENST00000601919 RAB14P61106 215 aa14.34□□□□□ -0.11
SSBP4-212ENST00000601919 OR10G4Q8NGN3 311 aa14.34□□□□□ -0.11
SSBP4-212ENST00000601919 OR10G9Q8NGN4 311 aa14.34□□□□□ -0.11
SSBP4-212ENST00000601919 OR10G7Q8NGN6 311 aa14.34□□□□□ -0.11
SSBP4-212ENST00000601919 GATAD1Q8WUU5 269 aa14.34□□□□□ -0.11
SSBP4-212ENST00000601919 DNAJC4Q9NNZ3 241 aa14.34□□□□□ -0.11
SSBP4-212ENST00000601919 BMPR1BO00238 502 aa14.33□□□□□ -0.12
SSBP4-212ENST00000601919 YIF1AO95070 293 aa14.33□□□□□ -0.12
SSBP4-212ENST00000601919 IL4P05112 153 aa14.33□□□□□ -0.12
SSBP4-212ENST00000601919 LYZP61626 148 aa14.33□□□□□ -0.12
SSBP4-212ENST00000601919 RHOBP62745 196 aa14.33□□□□□ -0.12
SSBP4-212ENST00000601919 FAM74A1Q5RGS3 127 aa14.33□□□□□ -0.12
SSBP4-212ENST00000601919 KLHL30-AS1Q8NEE0 82 aa14.33□□□□□ -0.12
SSBP4-212ENST00000601919 OR1B1Q8NGR6 318 aa14.33□□□□□ -0.12
SSBP4-212ENST00000601919 RNF125Q96EQ8 232 aa14.33□□□□□ -0.12
SSBP4-212ENST00000601919 ACTR3CQ9C0K3 210 aaPredicted RBP14.33□□□□□ -0.12
SSBP4-212ENST00000601919 RPRMQ9NS64 109 aa14.33□□□□□ -0.12
SSBP4-212ENST00000601919 PUS1Q9Y606 427 aaKnown RBP eCLIP14.33□□□□□ -0.12
SSBP4-212ENST00000601919 NIPBLQ6KC79 2804 aaeCLIP14.33□□□□□ -0.12
SSBP4-212ENST00000601919 A0A1W2PPV4 95 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 WI2-2373I1.2A0A1W2PRP0 233 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 ZNF705EA8MWA4 302 aaPredicted RBP14.32□□□□□ -0.12
SSBP4-212ENST00000601919 I3L521 148 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 NDUFA4O00483 81 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 TRBV12-3P01733 135 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 OR5G3P0C626 314 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 ORM2P19652 201 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 ZP3P21754 424 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 RAB2AP61019 212 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 BLOC1S1P78537 153 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 RPEL1Q2QD12 228 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 FAM106AQ4KMX7 169 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 C10orf113Q5VZT2 155 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 SAT2Q96F10 170 aaPredicted RBP14.32□□□□□ -0.12
SSBP4-212ENST00000601919 PFDN2Q9UHV9 154 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 JMJD1CQ15652 2540 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 CUBNO60494 3623 aa14.32□□□□□ -0.12
SSBP4-212ENST00000601919 AWAT1Q58HT5 328 aa14.31□□□□□ -0.12
SSBP4-212ENST00000601919 GPHB5Q86YW7 130 aa14.31□□□□□ -0.12
SSBP4-212ENST00000601919 C11orf44Q8N8P7 122 aa14.31□□□□□ -0.12
SSBP4-212ENST00000601919 FAM213BQ8TBF2 198 aa14.31□□□□□ -0.12
SSBP4-212ENST00000601919 DPF1Q92782 380 aa14.31□□□□□ -0.12
SSBP4-212ENST00000601919 CITED2Q99967 270 aaPredicted RBP14.31□□□□□ -0.12
SSBP4-212ENST00000601919 PBDC1Q9BVG4 233 aa14.31□□□□□ -0.12
SSBP4-212ENST00000601919 MRPL32Q9BYC8 188 aaKnown RBP14.31□□□□□ -0.12
SSBP4-212ENST00000601919 VSIRQ9H7M9 311 aa14.31□□□□□ -0.12
SSBP4-212ENST00000601919 PLA2G2EQ9NZK7 142 aa14.31□□□□□ -0.12
SSBP4-212ENST00000601919 RNF24Q9Y225 148 aa14.31□□□□□ -0.12
SSBP4-212ENST00000601919 HIGD1AQ9Y241 93 aa14.31□□□□□ -0.12
SSBP4-212ENST00000601919 IGHV3-35A0A0C4DH35 117 aa14.3□□□□□ -0.12
SSBP4-212ENST00000601919 TEX46H3BTG2 121 aa14.3□□□□□ -0.12
SSBP4-212ENST00000601919 FAM122CQ6P4D5 195 aa14.3□□□□□ -0.12
SSBP4-212ENST00000601919 TOMM20LQ6UXN7 152 aa14.3□□□□□ -0.12
SSBP4-212ENST00000601919 PRIMA1Q86XR5 153 aa14.3□□□□□ -0.12
SSBP4-212ENST00000601919 DOK5Q9P104 306 aa14.3□□□□□ -0.12
SSBP4-212ENST00000601919 RABAC1Q9UI14 185 aa14.3□□□□□ -0.12
SSBP4-212ENST00000601919 CTXND1A0A1B0GTU2 59 aa14.29□□□□□ -0.12
SSBP4-212ENST00000601919 SEC14L6B5MCN3 397 aa14.29□□□□□ -0.12
SSBP4-212ENST00000601919 LINC01619G3V211 115 aa14.29□□□□□ -0.12
SSBP4-212ENST00000601919 CDC34P49427 236 aaPredicted RBP14.29□□□□□ -0.12
SSBP4-212ENST00000601919 KRTAP24-1Q3LI83 254 aa14.29□□□□□ -0.12
SSBP4-212ENST00000601919 GCSAMLQ5JQS6 135 aa14.29□□□□□ -0.12
SSBP4-212ENST00000601919 FAM78BQ5VT40 261 aa14.29□□□□□ -0.12
SSBP4-212ENST00000601919 NDUFA11Q86Y39 141 aa14.29□□□□□ -0.12
SSBP4-212ENST00000601919 RPP25LQ8N5L8 163 aaKnown RBP14.29□□□□□ -0.12
SSBP4-212ENST00000601919 OR1N2Q8NGR9 330 aa14.29□□□□□ -0.12
SSBP4-212ENST00000601919 ZFAND3Q9H8U3 227 aa14.29□□□□□ -0.12
SSBP4-212ENST00000601919 IGHV4OR15-8A0A075B7B6 117 aa14.28□□□□□ -0.12
SSBP4-212ENST00000601919 A0A087WW49 117 aa14.28□□□□□ -0.12
SSBP4-212ENST00000601919 H2AFB1P0C5Y9 115 aa14.28□□□□□ -0.12
SSBP4-212ENST00000601919 TAS2R45P59539 299 aa14.28□□□□□ -0.12
SSBP4-212ENST00000601919 OR11H1Q8NG94 326 aa14.28□□□□□ -0.12
SSBP4-212ENST00000601919 TMEM37Q8WXS4 190 aa14.28□□□□□ -0.12
SSBP4-212ENST00000601919 TMEM158Q8WZ71 300 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms