RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ALX4Q9H161 411 aaPredicted RBP2.53□□□□□ -2
CKS1BP3-201ENST00000600888 ZNF430Q9H8G1 570 aaPredicted RBP2.53□□□□□ -2
CKS1BP3-201ENST00000600888 SLC2A9Q9NRM0 540 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 BET1LQ9NYM9 111 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 NDUFA13Q9P0J0 144 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 PEF1Q9UBV8 284 aaKnown RBP2.53□□□□□ -2
CKS1BP3-201ENST00000600888 ZNF257Q9Y2Q1 563 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 DNAH9Q9NYC9 4486 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 A0A1B0GW64 132 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 E7EUB6 86 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 H0Y980 276 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 LGALS9O00182 355 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 DUSP14O95147 198 aaKnown RBP2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 GABARAPO95166 117 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 DHFRP00374 187 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 IGHV3-11P01762 117 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 P0C879 139 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 NQO2P16083 231 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 SPNP16150 400 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 HIST1H1BP16401 226 aaKnown RBP2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 CTRB1P17538 263 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 F2RP25116 425 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 PTBP1P26599 531 aaKnown RBP eCLIP2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 PRSS3P35030 304 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 RPL27AP46776 148 aaKnown RBP2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 TAS2R46P59540 309 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 TAS2R20P59543 309 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 RPL8P62917 257 aaKnown RBP2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 RHOGP84095 191 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 ZNF45Q02386 682 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 ASAH1Q13510 395 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 ZNF79Q15937 498 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 TMEM69Q5SWH9 247 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 CTRB2Q6GPI1 263 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 LPCAT3Q6P1A2 487 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 IL34Q6ZMJ4 242 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 IDO2Q6ZQW0 420 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 ZNF818PQ6ZRF7 136 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 HSD17B13Q7Z5P4 300 aaPredicted RBP2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 GPHB5Q86YW7 130 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR9G4Q8NGQ1 327 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 CASTOR1Q8WTX7 329 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 TCTEX1D2Q8WW35 142 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR4C12Q96R67 309 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 PHB2Q99623 299 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 DCUN1D5Q9BTE7 237 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 CCL28Q9NRJ3 127 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 ZNF355PQ9NSJ1 428 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 COA4Q9NYJ1 87 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 TAS2R8Q9NYW2 309 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 COMMD9Q9P000 198 aa2.52□□□□□ -2.01
CKS1BP3-201ENST00000600888 IGLV11-55A0A075B6I3 123 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 TRBV7-1A0A0A6YYK4 115 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 SMIM31A0A1B0GVY4 71 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 IGLC7A0M8Q6 106 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 MFSD2BA6NFX1 497 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 A8MWP6 167 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 J3QRK9 145 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 GPR31O00270 319 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 UPK2O00526 184 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 GGCTO75223 188 aaKnown RBP2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 PGLYRP1O75594 196 aaPredicted RBP2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 TRBV12-3P01733 135 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 EIF4EP06730 217 aaKnown RBP2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 PTHLHP12272 177 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 HLA-GP17693 338 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 ELK1P19419 428 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 TBPP20226 339 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 PSMB6P28072 239 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 RCVRNP35243 200 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 TGFBR1P36897 503 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 ALDH3B2P48448 385 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 RORCP51449 518 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR2B8PP59922 312 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 SSTP61278 116 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 RND3P61587 244 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 VBP1P61758 197 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 NCS1P62166 190 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 LSM3P62310 102 aaKnown RBP2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 MRPS10P82664 201 aaKnown RBP2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 SSBP1Q04837 148 aaKnown RBP2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 ATP5G2Q06055 141 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 EXOSC2Q13868 293 aaKnown RBP2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 RPEL1Q2QD12 228 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 C10orf55Q5SWW7 151 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 C9orf129Q5T035 196 aaKnown RBP2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 LCN12Q6JVE5 192 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 LHFPL1Q86WI0 220 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 KRTAP11-1Q8IUC1 163 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 CMTM1Q8IZ96 169 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 VKORC1L1Q8N0U8 176 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 Q8N402 240 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 ARRDC1Q8N5I2 433 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR1L6Q8NGR2 347 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR5H2Q8NGV7 314 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 C15orf40Q8WUR7 153 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 AP3S1Q92572 193 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 DGCR14Q96DF8 476 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms