RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 OR8G2PQ6IF36 304 aa14.55□□□□□ -0.08
SHKBP1-221ENST00000599833 Q8WTZ3 238 aa14.55□□□□□ -0.08
SHKBP1-221ENST00000599833 H0YIZ8 118 aa14.54□□□□□ -0.08
SHKBP1-221ENST00000599833 SCGB2A1O75556 95 aa14.54□□□□□ -0.08
SHKBP1-221ENST00000599833 NPPCP23582 126 aa14.54□□□□□ -0.08
SHKBP1-221ENST00000599833 DLK1P80370 383 aa14.54□□□□□ -0.08
SHKBP1-221ENST00000599833 ODF3L2Q3SX64 289 aa14.54□□□□□ -0.08
SHKBP1-221ENST00000599833 RBPMS2Q6ZRY4 209 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-221ENST00000599833 TMEM144Q7Z5S9 345 aa14.54□□□□□ -0.08
SHKBP1-221ENST00000599833 GTSCR1Q86UQ5 136 aa14.54□□□□□ -0.08
SHKBP1-221ENST00000599833 SBSPONQ8IVN8 264 aa14.54□□□□□ -0.08
SHKBP1-221ENST00000599833 DEFB125Q8N687 156 aa14.54□□□□□ -0.08
SHKBP1-221ENST00000599833 CITED4Q96RK1 184 aa14.54□□□□□ -0.08
SHKBP1-221ENST00000599833 NMES1Q9C002 83 aa14.54□□□□□ -0.08
SHKBP1-221ENST00000599833 ALG5Q9Y673 324 aa14.54□□□□□ -0.08
SHKBP1-221ENST00000599833 ZFP92A6NM28 416 aa14.53□□□□□ -0.08
SHKBP1-221ENST00000599833 FNDC10F2Z333 226 aa14.53□□□□□ -0.08
SHKBP1-221ENST00000599833 DFFBO76075 338 aa14.53□□□□□ -0.08
SHKBP1-221ENST00000599833 OR51G1Q8NGK1 321 aa14.53□□□□□ -0.08
SHKBP1-221ENST00000599833 GLMPQ8WWB7 406 aa14.53□□□□□ -0.08
SHKBP1-221ENST00000599833 RNF125Q96EQ8 232 aa14.53□□□□□ -0.08
SHKBP1-221ENST00000599833 METTL26Q96S19 204 aa14.53□□□□□ -0.08
SHKBP1-221ENST00000599833 LYRM2Q9NU23 88 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-221ENST00000599833 IGSF23A1L1A6 192 aa14.52□□□□□ -0.09
SHKBP1-221ENST00000599833 FAM24AA6NFZ4 105 aa14.52□□□□□ -0.09
SHKBP1-221ENST00000599833 DEDDO75618 318 aa14.52□□□□□ -0.09
SHKBP1-221ENST00000599833 HNRNPCP07910 306 aaKnown RBP eCLIP14.52□□□□□ -0.09
SHKBP1-221ENST00000599833 C16orf54Q6UWD8 224 aa14.52□□□□□ -0.09
SHKBP1-221ENST00000599833 TCF24Q7RTU0 167 aa14.52□□□□□ -0.09
SHKBP1-221ENST00000599833 ASCL2Q99929 193 aa14.52□□□□□ -0.09
SHKBP1-221ENST00000599833 RBMY1BA6NDE4 496 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-221ENST00000599833 RBMY1EA6NEQ0 496 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-221ENST00000599833 BUB3O43684 328 aa14.51□□□□□ -0.09
SHKBP1-221ENST00000599833 RBMY1DP0C7P1 496 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-221ENST00000599833 GATA2P23769 480 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-221ENST00000599833 P2RY1P47900 373 aa14.51□□□□□ -0.09
SHKBP1-221ENST00000599833 S100A10P60903 97 aa14.51□□□□□ -0.09
SHKBP1-221ENST00000599833 RRAS2P62070 204 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-221ENST00000599833 LAMTOR1Q6IAA8 161 aa14.51□□□□□ -0.09
SHKBP1-221ENST00000599833 OR5AC2Q9NZP5 309 aa14.51□□□□□ -0.09
SHKBP1-221ENST00000599833 OR11H12B2RN74 326 aa14.5□□□□□ -0.09
SHKBP1-221ENST00000599833 CXCL3P19876 107 aa14.5□□□□□ -0.09
SHKBP1-221ENST00000599833 OR2F1Q13607 317 aa14.5□□□□□ -0.09
SHKBP1-221ENST00000599833 FAM24BQ8N5W8 94 aa14.5□□□□□ -0.09
SHKBP1-221ENST00000599833 TMEM252Q8N6L7 170 aa14.5□□□□□ -0.09
SHKBP1-221ENST00000599833 OR10P1Q8NGE3 313 aa14.5□□□□□ -0.09
SHKBP1-221ENST00000599833 GGACTQ9BVM4 153 aa14.5□□□□□ -0.09
SHKBP1-221ENST00000599833 MS4A6AQ9H2W1 248 aa14.5□□□□□ -0.09
SHKBP1-221ENST00000599833 CSMD3Q7Z407 3707 aa14.5□□□□□ -0.09
SHKBP1-221ENST00000599833 L7N2F9 121 aa14.49□□□□□ -0.09
SHKBP1-221ENST00000599833 VAMP2P63027 116 aa14.49□□□□□ -0.09
SHKBP1-221ENST00000599833 OXA1LQ15070 435 aa14.49□□□□□ -0.09
SHKBP1-221ENST00000599833 VWC2Q2TAL6 325 aa14.49□□□□□ -0.09
SHKBP1-221ENST00000599833 FAM110AQ9BQ89 295 aa14.49□□□□□ -0.09
SHKBP1-221ENST00000599833 RNF126Q9BV68 326 aa14.49□□□□□ -0.09
SHKBP1-221ENST00000599833 MGAT4CQ9UBM8 478 aa14.49□□□□□ -0.09
SHKBP1-221ENST00000599833 RABAC1Q9UI14 185 aa14.49□□□□□ -0.09
SHKBP1-221ENST00000599833 STARD9Q9P2P6 4700 aa14.49□□□□□ -0.09
SHKBP1-221ENST00000599833 SSNA1O43805 119 aa14.48□□□□□ -0.09
SHKBP1-221ENST00000599833 CST7O76096 145 aa14.48□□□□□ -0.09
SHKBP1-221ENST00000599833 EIF2B2P49770 351 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-221ENST00000599833 CAV2P51636 162 aa14.48□□□□□ -0.09
SHKBP1-221ENST00000599833 AKR1C1Q04828 323 aa14.48□□□□□ -0.09
SHKBP1-221ENST00000599833 GBGT1Q8N5D6 347 aa14.48□□□□□ -0.09
SHKBP1-221ENST00000599833 DCANP1Q8TF63 244 aa14.48□□□□□ -0.09
SHKBP1-221ENST00000599833 PPP1R1CQ8WVI7 109 aa14.48□□□□□ -0.09
SHKBP1-221ENST00000599833 TM2D3Q9BRN9 247 aa14.48□□□□□ -0.09
SHKBP1-221ENST00000599833 SRD5A3Q9H8P0 318 aa14.48□□□□□ -0.09
SHKBP1-221ENST00000599833 NPVFQ9HCQ7 196 aa14.48□□□□□ -0.09
SHKBP1-221ENST00000599833 UBQLN2Q9UHD9 624 aa14.48□□□□□ -0.09
SHKBP1-221ENST00000599833 IGKV3-7A0A075B6H7 116 aa14.47□□□□□ -0.09
SHKBP1-221ENST00000599833 TRAV2A0A0B4J234 112 aa14.47□□□□□ -0.09
SHKBP1-221ENST00000599833 A0A1W2PS18 150 aa14.47□□□□□ -0.09
SHKBP1-221ENST00000599833 OR4C46A6NHA9 309 aa14.47□□□□□ -0.09
SHKBP1-221ENST00000599833 CD5P06127 495 aa14.47□□□□□ -0.09
SHKBP1-221ENST00000599833 SULT1A1P50225 295 aa14.47□□□□□ -0.09
SHKBP1-221ENST00000599833 SLC38A11Q08AI6 406 aa14.47□□□□□ -0.09
SHKBP1-221ENST00000599833 HAGHQ16775 308 aa14.47□□□□□ -0.09
SHKBP1-221ENST00000599833 CYP2G1PQ6ZSU1 146 aa14.47□□□□□ -0.09
SHKBP1-221ENST00000599833 OR11H7Q8NGC8 314 aa14.47□□□□□ -0.09
SHKBP1-221ENST00000599833 C17orf77Q96MU5 243 aa14.47□□□□□ -0.09
SHKBP1-221ENST00000599833 TMEM231Q9H6L2 316 aa14.47□□□□□ -0.09
SHKBP1-221ENST00000599833 SMCO3A2RU48 225 aa14.46□□□□□ -0.09
SHKBP1-221ENST00000599833 K7EQG2 157 aa14.46□□□□□ -0.09
SHKBP1-221ENST00000599833 NHLRC4P0CG21 123 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-221ENST00000599833 PVALBP20472 110 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-221ENST00000599833 BMI1P35226 326 aa14.46□□□□□ -0.09
SHKBP1-221ENST00000599833 TFPI2P48307 235 aa14.46□□□□□ -0.09
SHKBP1-221ENST00000599833 BCAP31P51572 246 aa14.46□□□□□ -0.09
SHKBP1-221ENST00000599833 PLP1P60201 277 aa14.46□□□□□ -0.09
SHKBP1-221ENST00000599833 LYZP61626 148 aa14.46□□□□□ -0.09
SHKBP1-221ENST00000599833 ZNF124Q15973 351 aa14.46□□□□□ -0.09
SHKBP1-221ENST00000599833 MGST2Q99735 147 aa14.46□□□□□ -0.09
SHKBP1-221ENST00000599833 PBDC1Q9BVG4 233 aa14.46□□□□□ -0.09
SHKBP1-221ENST00000599833 MAP6D1Q9H9H5 199 aa14.46□□□□□ -0.09
SHKBP1-221ENST00000599833 MPC2O95563 127 aa14.45□□□□□ -0.1
SHKBP1-221ENST00000599833 FABP1P07148 127 aa14.45□□□□□ -0.1
SHKBP1-221ENST00000599833 CYCSP99999 105 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-221ENST00000599833 FCN2Q15485 313 aa14.45□□□□□ -0.1
SHKBP1-221ENST00000599833 RGS21Q2M5E4 152 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms