RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 WNK1Q9H4A3 2382 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 EML6Q6ZMW3 1958 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 EXPH5Q8NEV8 1989 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 DOCK3Q8IZD9 2030 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 FREM2Q5SZK8 3169 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 DLG5Q8TDM6 1919 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 IGKV3-7A0A075B6H7 116 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 NBPF19A0A087WUL8 3843 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 A0A0D9SG52 128 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 FAM236DA0A1B0GTK5 79 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 SMIM9A6NGZ8 99 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 OR5F1O95221 314 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 CNIH1O95406 144 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 UBBP0CG47 229 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 SMIM10L2AP0DMW4 78 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 SMIM10L2BP0DMW5 78 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 LYNX1P0DP58 116 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 FAM236CP0DP71 79 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 COX6A1P12074 109 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 SRSF6Q13247 344 aaKnown RBP1.07□□□□□ -2.24
SMAD4-207ENST00000589076 IAH1Q2TAA2 248 aaPredicted RBP1.07□□□□□ -2.24
SMAD4-207ENST00000589076 C10orf55Q5SWW7 151 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 BPIFA4PQ86YQ2 179 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 CLVS1Q8IUQ0 354 aaPredicted RBP1.07□□□□□ -2.24
SMAD4-207ENST00000589076 OR6V1Q8N148 313 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 Q8N2B8 174 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 SERPINI1Q99574 410 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 TRIM4Q9C037 500 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 DCSTAMPQ9H295 470 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 OR51V1Q9H2C8 321 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 SLC39A9Q9NUM3 307 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 SLC22A13Q9Y226 551 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 ERGIC3Q9Y282 383 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 LOC400499M0QZD8 3231 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 ROBO3Q96MS0 1386 aa1.07□□□□□ -2.24
SMAD4-207ENST00000589076 PTPRZ1P23471 2315 aaPredicted RBP1.06□□□□□ -2.24
SMAD4-207ENST00000589076 TNRC6BQ9UPQ9 1833 aaKnown RBP1.06□□□□□ -2.24
SMAD4-207ENST00000589076 TMEM212A6NML5 194 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 TMEM114B3SHH9 223 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 BUB1B-PAK6H3BSN5 160 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 SHBGP04278 402 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 S100A6P06703 90 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 CDC42P60953 191 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 HIST1H3AP68431 136 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 CCL7P80098 99 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 H3F3AP84243 136 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 ZNF846Q147U1 533 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 KHDC3LQ587J8 217 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 TMEM97Q5BJF2 176 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 SPANXN5Q5MJ07 72 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 KRT222Q8N1A0 295 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 HIST3H2BBQ8N257 126 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 LINC00471Q8N535 108 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 SIGLECL1Q8N7X8 197 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 GDPD1Q8N9F7 314 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 ZNF565Q8N9K5 539 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 CT55Q8WUE5 264 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 DNAJC9Q8WXX5 260 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 CCDC90BQ9GZT6 254 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 MIXL1Q9H2W2 232 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 GLTPQ9NZD2 209 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 OR5AC2Q9NZP5 309 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 RTL1A6NKG5 1358 aa1.06□□□□□ -2.24
SMAD4-207ENST00000589076 TAF1LQ8IZX4 1826 aa1.05□□□□□ -2.24
SMAD4-207ENST00000589076 XIRP2A4UGR9 3374 aa1.05□□□□□ -2.24
SMAD4-207ENST00000589076 CEP192Q8TEP8 1941 aa1.05□□□□□ -2.24
SMAD4-207ENST00000589076 A0A087WUJ7 227 aa1.05□□□□□ -2.24
SMAD4-207ENST00000589076 hADV38S2A0JD32 116 aa1.05□□□□□ -2.24
SMAD4-207ENST00000589076 OR2J2O76002 312 aa1.05□□□□□ -2.24
SMAD4-207ENST00000589076 TCL1BO95988 128 aa1.05□□□□□ -2.24
SMAD4-207ENST00000589076 DEFA1P59665 94 aa1.05□□□□□ -2.24
SMAD4-207ENST00000589076 CDK10Q15131 360 aa1.05□□□□□ -2.24
SMAD4-207ENST00000589076 DPPA3Q6W0C5 159 aa1.05□□□□□ -2.24
SMAD4-207ENST00000589076 C12orf29Q8N999 325 aa1.05□□□□□ -2.24
SMAD4-207ENST00000589076 OR4E2Q8NGC2 313 aa1.05□□□□□ -2.24
SMAD4-207ENST00000589076 DNAH14Q0VDD8 3507 aa1.05□□□□□ -2.24
SMAD4-207ENST00000589076 UBR2Q8IWV8 1755 aa1.05□□□□□ -2.24
SMAD4-207ENST00000589076 OBSL1O75147 1896 aa1.05□□□□□ -2.24
SMAD4-207ENST00000589076 PPRC1Q5VV67 1664 aaKnown RBP1.04□□□□□ -2.24
SMAD4-207ENST00000589076 FRYQ5TBA9 3013 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 IGKV1D-42A0A075B6H8 117 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 TRAV14DV4A0A0A6YYC5 116 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 C19orf84I3L1E1 186 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 HCRTO43612 131 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 FADS1O60427 444 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 HAND1O96004 215 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 CTSDP07339 412 aaPredicted RBP1.04□□□□□ -2.24
SMAD4-207ENST00000589076 RNASE3P12724 160 aaKnown RBP1.04□□□□□ -2.24
SMAD4-207ENST00000589076 S100A4P26447 101 aaKnown RBP1.04□□□□□ -2.24
SMAD4-207ENST00000589076 FKBP2P26885 142 aaKnown RBP1.04□□□□□ -2.24
SMAD4-207ENST00000589076 RHEBQ15382 184 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 SURF2Q15527 256 aaPredicted RBP1.04□□□□□ -2.24
SMAD4-207ENST00000589076 C12orf74Q32Q52 190 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 Q6ZQT0 140 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 TRAPPC6BQ86SZ2 158 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 OOSP2Q86WS3 158 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 OR4C6Q8NH72 309 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 SLC50A1Q9BRV3 221 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 REG4Q9BYZ8 158 aa1.04□□□□□ -2.24
SMAD4-207ENST00000589076 TLNRD1Q9H1K6 362 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms