RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 FOXI2Q6ZQN5 318 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 FAM219AQ8IW50 185 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 OR51G1Q8NGK1 321 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 OR52I2Q8NH67 350 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 GLYATL2Q8WU03 294 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 GPR146Q96CH1 333 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 Q9H521 79 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 ENY2Q9NPA8 101 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 YTHDF2Q9Y5A9 579 aaKnown RBP9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 IGHV3OR16-12A0A075B7B8 117 aa9.71□□□□□ -0.86
CLPTM1-208ENST00000588274 F6UB75 175 aa9.71□□□□□ -0.86
CLPTM1-208ENST00000588274 GSTZ1O43708 216 aaPredicted RBP9.71□□□□□ -0.86
CLPTM1-208ENST00000588274 RD3LP0DJH9 198 aa9.71□□□□□ -0.86
CLPTM1-208ENST00000588274 SOHLH1Q5JUK2 328 aa9.71□□□□□ -0.86
CLPTM1-208ENST00000588274 AMTNQ6UX39 209 aa9.71□□□□□ -0.86
CLPTM1-208ENST00000588274 RNF125Q96EQ8 232 aa9.71□□□□□ -0.86
CLPTM1-208ENST00000588274 RRNAD1Q96FB5 475 aaKnown RBP9.71□□□□□ -0.86
CLPTM1-208ENST00000588274 RTBDNQ9BSG5 229 aaPredicted RBP9.71□□□□□ -0.86
CLPTM1-208ENST00000588274 MTFP1Q9UDX5 166 aa9.71□□□□□ -0.86
CLPTM1-208ENST00000588274 CACNG5Q9UF02 275 aa9.71□□□□□ -0.86
CLPTM1-208ENST00000588274 LOC102723971A0A1B0GUV8 181 aa9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 C16orf90A8MZG2 172 aa9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 B3GALNT1O75752 331 aa9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 TBPP20226 339 aa9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 PSMB3P49720 205 aa9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 MEF2DQ14814 521 aa9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 SELENOHQ8IZQ5 122 aaKnown RBP9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 MAPKAPK5-AS1Q8N8E1 139 aa9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 ZNRF2Q8NHG8 242 aa9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 TERB2Q8NHR7 220 aa9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 MARCH1Q8TCQ1 289 aa9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 ACY3Q96HD9 319 aa9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 ABHD1Q96SE0 405 aa9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 HEYLQ9NQ87 328 aaPredicted RBP9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 COPZ2Q9P299 210 aa9.7□□□□□ -0.86
CLPTM1-208ENST00000588274 A0A0J9YX75 114 aa9.69□□□□□ -0.86
CLPTM1-208ENST00000588274 PLAC8L1A1L4L8 177 aa9.69□□□□□ -0.86
CLPTM1-208ENST00000588274 HTN3P15516 51 aa9.69□□□□□ -0.86
CLPTM1-208ENST00000588274 RORCP51449 518 aa9.69□□□□□ -0.86
CLPTM1-208ENST00000588274 FAM3BP58499 235 aaPredicted RBP9.69□□□□□ -0.86
CLPTM1-208ENST00000588274 OR8G2PQ6IF36 304 aa9.69□□□□□ -0.86
CLPTM1-208ENST00000588274 FAAP20Q6NZ36 180 aa9.69□□□□□ -0.86
CLPTM1-208ENST00000588274 CCDC71LQ8N9Z2 235 aa9.69□□□□□ -0.86
CLPTM1-208ENST00000588274 RBPMSQ93062 196 aaKnown RBP9.69□□□□□ -0.86
CLPTM1-208ENST00000588274 C20orf173Q96LM9 149 aa9.69□□□□□ -0.86
CLPTM1-208ENST00000588274 NBDYA0A0U1RRE5 68 aa9.68□□□□□ -0.86
CLPTM1-208ENST00000588274 SMIM31A0A1B0GVY4 71 aa9.68□□□□□ -0.86
CLPTM1-208ENST00000588274 PRM2P04554 102 aa9.68□□□□□ -0.86
CLPTM1-208ENST00000588274 ALDH3B2P48448 385 aa9.68□□□□□ -0.86
CLPTM1-208ENST00000588274 VBP1P61758 197 aa9.68□□□□□ -0.86
CLPTM1-208ENST00000588274 ZNF90Q03938 601 aa9.68□□□□□ -0.86
CLPTM1-208ENST00000588274 FAM78BQ5VT40 261 aa9.68□□□□□ -0.86
CLPTM1-208ENST00000588274 Q8N1X5 172 aa9.68□□□□□ -0.86
CLPTM1-208ENST00000588274 ZFAND1Q8TCF1 268 aa9.68□□□□□ -0.86
CLPTM1-208ENST00000588274 NAA60Q9H7X0 242 aa9.68□□□□□ -0.86
CLPTM1-208ENST00000588274 FAT1Q14517 4588 aa9.68□□□□□ -0.86
CLPTM1-208ENST00000588274 TEX13DA0A0J9YY54 714 aaPredicted RBP9.67□□□□□ -0.86
CLPTM1-208ENST00000588274 CRXO43186 299 aaPredicted RBP9.67□□□□□ -0.86
CLPTM1-208ENST00000588274 HBE1P02100 147 aa9.67□□□□□ -0.86
CLPTM1-208ENST00000588274 SUPT4H1P63272 117 aaKnown RBP9.67□□□□□ -0.86
CLPTM1-208ENST00000588274 PSG9Q00887 426 aa9.67□□□□□ -0.86
CLPTM1-208ENST00000588274 ETFRF1Q6IPR1 90 aa9.67□□□□□ -0.86
CLPTM1-208ENST00000588274 C15orf53Q8NAA6 179 aa9.67□□□□□ -0.86
CLPTM1-208ENST00000588274 TMEM229BQ8NBD8 167 aa9.67□□□□□ -0.86
CLPTM1-208ENST00000588274 OR4B1Q8NGF8 309 aa9.67□□□□□ -0.86
CLPTM1-208ENST00000588274 RNASE11Q8TAA1 199 aaKnown RBP9.67□□□□□ -0.86
CLPTM1-208ENST00000588274 LINC00052Q96N35 136 aa9.67□□□□□ -0.86
CLPTM1-208ENST00000588274 FUNDC2Q9BWH2 189 aa9.67□□□□□ -0.86
CLPTM1-208ENST00000588274 TMEM56-RWDD3S4R434 201 aa9.67□□□□□ -0.86
CLPTM1-208ENST00000588274 IGKV1OR2-108A0A075B7D4 117 aa9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 CRYM-AS1A6NIL9 109 aa9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 CEBPZOSA8MTT3 80 aa9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 ISLRO14498 428 aa9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 NUP62P37198 522 aaPredicted RBP9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 GAMTQ14353 236 aa9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 SCGB2B2Q4G0G5 96 aa9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 C1orf194Q5T5A4 169 aa9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 TMEM268Q5VZI3 342 aa9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 SPATA31B1PQ5VZV4 182 aa9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 C6orf223Q8N319 242 aa9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 PBDC1Q9BVG4 233 aa9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 KRTAP1-5Q9BYS1 174 aa9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 PRR13Q9NZ81 148 aa9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 HSPB7Q9UBY9 170 aa9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 GOLT1BQ9Y3E0 138 aa9.66□□□□□ -0.86
CLPTM1-208ENST00000588274 RAB3DO95716 219 aa9.65□□□□□ -0.86
CLPTM1-208ENST00000588274 DAD1P61803 113 aa9.65□□□□□ -0.86
CLPTM1-208ENST00000588274 RRN3P1Q2M238 152 aa9.65□□□□□ -0.86
CLPTM1-208ENST00000588274 GPR107Q5VW38 600 aa9.65□□□□□ -0.86
CLPTM1-208ENST00000588274 STEAP1BQ6NZ63 245 aa9.65□□□□□ -0.86
CLPTM1-208ENST00000588274 IGF2BP2-AS1Q96M15 143 aa9.65□□□□□ -0.86
CLPTM1-208ENST00000588274 MYCBP2O75592 4640 aa9.64□□□□□ -0.87
CLPTM1-208ENST00000588274 TAS2R19P59542 299 aa9.64□□□□□ -0.87
CLPTM1-208ENST00000588274 KLF9Q13886 244 aaPredicted RBP9.64□□□□□ -0.87
CLPTM1-208ENST00000588274 SURF2Q15527 256 aaPredicted RBP9.64□□□□□ -0.87
CLPTM1-208ENST00000588274 COQ8AQ8NI60 647 aa9.64□□□□□ -0.87
CLPTM1-208ENST00000588274 MIXL1Q9H2W2 232 aa9.64□□□□□ -0.87
CLPTM1-208ENST00000588274 DOK5Q9P104 306 aa9.64□□□□□ -0.87
CLPTM1-208ENST00000588274 EXTL2Q9UBQ6 330 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 414.1 ms