RNA–Protein interactions for RNA: ENST00000584960.1

RIOK3-210, Transcript of RIO kinase 3, human

TSL 2

Gene RIOK3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIOK3-210	ENST00000584960	IGKV1OR2-108	A0A075B7D4	117 aa		11.22	□□□□□ -0.61
RIOK3-210	ENST00000584960	IGHV7-4-1	A0A0J9YVY3	117 aa		11.22	□□□□□ -0.61
RIOK3-210	ENST00000584960		A0A1W2PS18	150 aa		11.22	□□□□□ -0.61
RIOK3-210	ENST00000584960	PSG1	P11464	419 aa		11.22	□□□□□ -0.61
RIOK3-210	ENST00000584960	RPL12	P30050	165 aa	Known RBP	11.22	□□□□□ -0.61
RIOK3-210	ENST00000584960	S100A7	P31151	101 aa		11.22	□□□□□ -0.61
RIOK3-210	ENST00000584960	NUP62	P37198	522 aa	Predicted RBP	11.22	□□□□□ -0.61
RIOK3-210	ENST00000584960	NHLH2	Q02577	135 aa		11.22	□□□□□ -0.61
RIOK3-210	ENST00000584960	RAB31	Q13636	194 aa		11.22	□□□□□ -0.61
RIOK3-210	ENST00000584960	DEFB114	Q30KQ6	69 aa		11.22	□□□□□ -0.61
RIOK3-210	ENST00000584960	ADAMTSL5	Q6ZMM2	481 aa		11.22	□□□□□ -0.61
RIOK3-210	ENST00000584960	TMEM147	Q9BVK8	224 aa		11.22	□□□□□ -0.61
RIOK3-210	ENST00000584960	TMEM231	Q9H6L2	316 aa		11.22	□□□□□ -0.61
RIOK3-210	ENST00000584960	MBD2	Q9UBB5	411 aa		11.22	□□□□□ -0.61
RIOK3-210	ENST00000584960	SMPX	Q9UHP9	88 aa		11.22	□□□□□ -0.61
RIOK3-210	ENST00000584960	TRAV25	A0A0B4J276	109 aa		11.21	□□□□□ -0.61
RIOK3-210	ENST00000584960	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.21	□□□□□ -0.61
RIOK3-210	ENST00000584960	MPDU1	O75352	247 aa		11.21	□□□□□ -0.61
RIOK3-210	ENST00000584960	CRYBB3	P26998	211 aa		11.21	□□□□□ -0.61
RIOK3-210	ENST00000584960	ZNF90	Q03938	601 aa		11.21	□□□□□ -0.61
RIOK3-210	ENST00000584960	LAMTOR1	Q6IAA8	161 aa		11.21	□□□□□ -0.61
RIOK3-210	ENST00000584960	LCN12	Q6JVE5	192 aa		11.21	□□□□□ -0.61
RIOK3-210	ENST00000584960	BPIFC	Q8NFQ6	507 aa		11.21	□□□□□ -0.61
RIOK3-210	ENST00000584960	OR2T35	Q8NGX2	323 aa		11.21	□□□□□ -0.61
RIOK3-210	ENST00000584960	LSM4	Q9Y4Z0	139 aa	Known RBP	11.21	□□□□□ -0.61
RIOK3-210	ENST00000584960	IL4	P05112	153 aa		11.2	□□□□□ -0.62
RIOK3-210	ENST00000584960	CYP2G1P	Q6ZSU1	146 aa		11.2	□□□□□ -0.62
RIOK3-210	ENST00000584960	S100A7A	Q86SG5	101 aa		11.2	□□□□□ -0.62
RIOK3-210	ENST00000584960	OR5C1	Q8NGR4	320 aa		11.2	□□□□□ -0.62
RIOK3-210	ENST00000584960	CHAC2	Q8WUX2	184 aa		11.2	□□□□□ -0.62
RIOK3-210	ENST00000584960	RNF125	Q96EQ8	232 aa		11.2	□□□□□ -0.62
RIOK3-210	ENST00000584960	GRAMD2B	Q96HH9	432 aa		11.2	□□□□□ -0.62
RIOK3-210	ENST00000584960	RABAC1	Q9UI14	185 aa		11.2	□□□□□ -0.62
RIOK3-210	ENST00000584960	SLC45A2	Q9UMX9	530 aa		11.2	□□□□□ -0.62
RIOK3-210	ENST00000584960	WDR83OS	Q9Y284	106 aa		11.2	□□□□□ -0.62
RIOK3-210	ENST00000584960	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.2	□□□□□ -0.62
RIOK3-210	ENST00000584960	HSPB11	Q9Y547	144 aa		11.2	□□□□□ -0.62
RIOK3-210	ENST00000584960	IGHV3OR16-8	A0A075B7F1	116 aa		11.19	□□□□□ -0.62
RIOK3-210	ENST00000584960	CHEK1	O14757	476 aa		11.19	□□□□□ -0.62
RIOK3-210	ENST00000584960	ZNF207	O43670	478 aa	Known RBP	11.19	□□□□□ -0.62
RIOK3-210	ENST00000584960	DFFB	O76075	338 aa		11.19	□□□□□ -0.62
RIOK3-210	ENST00000584960	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
RIOK3-210	ENST00000584960	EIF2B2	P49770	351 aa	Known RBP	11.19	□□□□□ -0.62
RIOK3-210	ENST00000584960	PXDC1	Q5TGL8	231 aa		11.19	□□□□□ -0.62
RIOK3-210	ENST00000584960	ZNF546	Q86UE3	836 aa		11.19	□□□□□ -0.62
RIOK3-210	ENST00000584960	RHPN1-AS1	Q9BWJ2	59 aa		11.19	□□□□□ -0.62
RIOK3-210	ENST00000584960	VSIR	Q9H7M9	311 aa		11.19	□□□□□ -0.62
RIOK3-210	ENST00000584960	MLX	Q9UH92	298 aa		11.19	□□□□□ -0.62
RIOK3-210	ENST00000584960	AGPAT2	O15120	278 aa		11.18	□□□□□ -0.62
RIOK3-210	ENST00000584960	PLP1	P60201	277 aa		11.18	□□□□□ -0.62
RIOK3-210	ENST00000584960	OR2F1	Q13607	317 aa		11.18	□□□□□ -0.62
RIOK3-210	ENST00000584960	CD300E	Q496F6	205 aa	Predicted RBP	11.18	□□□□□ -0.62
RIOK3-210	ENST00000584960	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.18	□□□□□ -0.62
RIOK3-210	ENST00000584960	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.18	□□□□□ -0.62
RIOK3-210	ENST00000584960	AQP10	Q96PS8	301 aa		11.18	□□□□□ -0.62
RIOK3-210	ENST00000584960	RNF24	Q9Y225	148 aa		11.18	□□□□□ -0.62
RIOK3-210	ENST00000584960		U3KQE9	123 aa		11.18	□□□□□ -0.62
RIOK3-210	ENST00000584960	EDN2	P20800	178 aa		11.17	□□□□□ -0.62
RIOK3-210	ENST00000584960	CAMLG	P49069	296 aa		11.17	□□□□□ -0.62
RIOK3-210	ENST00000584960	AP2S1	P53680	142 aa	Predicted RBP	11.17	□□□□□ -0.62
RIOK3-210	ENST00000584960	KRTAP10-11	P60412	298 aa		11.17	□□□□□ -0.62
RIOK3-210	ENST00000584960	USF2	Q15853	346 aa	Predicted RBP	11.17	□□□□□ -0.62
RIOK3-210	ENST00000584960		Q5BKY6	102 aa		11.17	□□□□□ -0.62
RIOK3-210	ENST00000584960	BTNL8	Q6UX41	500 aa		11.17	□□□□□ -0.62
RIOK3-210	ENST00000584960	ATP5S	Q99766	215 aa		11.17	□□□□□ -0.62
RIOK3-210	ENST00000584960	UBE2L5P	A0A1B0GUS4	154 aa		11.16	□□□□□ -0.62
RIOK3-210	ENST00000584960	TSPAN4	O14817	238 aa		11.16	□□□□□ -0.62
RIOK3-210	ENST00000584960	GP9	P14770	177 aa		11.16	□□□□□ -0.62
RIOK3-210	ENST00000584960	RPL29	P47914	159 aa	Known RBP	11.16	□□□□□ -0.62
RIOK3-210	ENST00000584960	LYZ	P61626	148 aa		11.16	□□□□□ -0.62
RIOK3-210	ENST00000584960	C1orf194	Q5T5A4	169 aa		11.16	□□□□□ -0.62
RIOK3-210	ENST00000584960		Q6ZRG5	221 aa		11.16	□□□□□ -0.62
RIOK3-210	ENST00000584960	MGST2	Q99735	147 aa		11.16	□□□□□ -0.62
RIOK3-210	ENST00000584960	NEURL2	Q9BR09	285 aa		11.16	□□□□□ -0.62
RIOK3-210	ENST00000584960	PBDC1	Q9BVG4	233 aa		11.16	□□□□□ -0.62
RIOK3-210	ENST00000584960	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.16	□□□□□ -0.62
RIOK3-210	ENST00000584960	NOTCH1	P46531	2555 aa		11.16	□□□□□ -0.62
RIOK3-210	ENST00000584960	NBEAL1	Q6ZS30	2694 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	HELT	A6NFD8	242 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	ZNF785	A8K8V0	405 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	BUB3	O43684	328 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	HYPM	O75409	117 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	IFNA5	P01569	189 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	LINC00869	P0C866	280 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	PAFAH1B2	P68402	229 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	CLINT1	Q14677	625 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	FAM90A2P	Q658T7	463 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	TMEM61	Q8N0U2	210 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	ST8SIA2	Q92186	375 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	RNF2	Q99496	336 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	SPAG8	Q99932	426 aa	Predicted RBP	11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	KCNIP2	Q9NS61	270 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	FBXL17	Q9UF56	701 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	TNFSF18	Q9UNG2	199 aa		11.15	□□□□□ -0.62
RIOK3-210	ENST00000584960	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.14	□□□□□ -0.63
RIOK3-210	ENST00000584960	FXYD6-FXYD2	A0A087WZ82	144 aa		11.14	□□□□□ -0.63
RIOK3-210	ENST00000584960	IGHV3-49	A0A0A0MS15	119 aa		11.14	□□□□□ -0.63
RIOK3-210	ENST00000584960	C17orf112	F2Z3M2	114 aa		11.14	□□□□□ -0.63
RIOK3-210	ENST00000584960	APOH	P02749	345 aa	Predicted RBP	11.14	□□□□□ -0.63
RIOK3-210	ENST00000584960	ORM2	P19652	201 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms