RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 LINC01006Q8NI28 216 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 NARS2Q96I59 477 aaKnown RBP9.82□□□□□ -0.84
SRSF1-204ENST00000581979 CITED1Q99966 193 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 EIF5A2Q9GZV4 153 aaKnown RBP9.82□□□□□ -0.84
SRSF1-204ENST00000581979 S4R3C0 116 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 IGF1P05019 195 aa9.81□□□□□ -0.84
SRSF1-204ENST00000581979 NPBWR1P48145 328 aa9.81□□□□□ -0.84
SRSF1-204ENST00000581979 MFAP4P55083 255 aa9.81□□□□□ -0.84
SRSF1-204ENST00000581979 PEA15Q15121 130 aa9.81□□□□□ -0.84
SRSF1-204ENST00000581979 Q56UQ5 140 aa9.81□□□□□ -0.84
SRSF1-204ENST00000581979 GNG7O60262 68 aa9.8□□□□□ -0.84
SRSF1-204ENST00000581979 IGLC1P0CG04 106 aa9.8□□□□□ -0.84
SRSF1-204ENST00000581979 PROK1P58294 105 aa9.8□□□□□ -0.84
SRSF1-204ENST00000581979 TIGITQ495A1 244 aa9.8□□□□□ -0.84
SRSF1-204ENST00000581979 FAM78BQ5VT40 261 aa9.8□□□□□ -0.84
SRSF1-204ENST00000581979 IQCF2Q8IXL9 164 aa9.8□□□□□ -0.84
SRSF1-204ENST00000581979 OR1L4Q8NGR5 311 aa9.8□□□□□ -0.84
SRSF1-204ENST00000581979 C16orf95Q9H693 158 aa9.8□□□□□ -0.84
SRSF1-204ENST00000581979 C21orf62Q9NYP8 219 aa9.8□□□□□ -0.84
SRSF1-204ENST00000581979 GNG13Q9P2W3 67 aa9.8□□□□□ -0.84
SRSF1-204ENST00000581979 RNF114Q9Y508 228 aa9.8□□□□□ -0.84
SRSF1-204ENST00000581979 TRAV30A0A087WSZ9 112 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 RBFOX3A6NFN3 312 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 AP4M1O00189 453 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 WIPF1O43516 503 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 COX7A2P2O60397 106 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 IFNA1P01562 189 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 IGHV3-23P01764 117 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 FABP1P07148 127 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 RHOGP84095 191 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 HAGHQ16775 308 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 C19orf54Q5BKX5 351 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 Q6ZS46 218 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 Q6ZSV7 163 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 VN1R17PQ8TDU5 208 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 NOL4LQ96MY1 436 aaPredicted RBP9.79□□□□□ -0.84
SRSF1-204ENST00000581979 MS4A10Q96PG2 267 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 PFDN5Q99471 154 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 DOK5Q9P104 306 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 TRBV9A0A0B4J1U6 114 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 KRBOX1C9JBD0 128 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 SCGB2A1O75556 95 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 ZP3P21754 424 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 KRTAP10-3P60369 221 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 KLK9Q2XQG4 91 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 C15orf32Q32M92 178 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 SPATA31B1PQ5VZV4 182 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 NECAP1Q8NC96 275 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 GATAD1Q8WUU5 269 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 LINC00052Q96N35 136 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 RNF2Q99496 336 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 SEPSECSQ9HD40 501 aaKnown RBP9.79□□□□□ -0.84
SRSF1-204ENST00000581979 DNAJC4Q9NNZ3 241 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 KLK9Q9UKQ9 250 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 FUT9Q9Y231 359 aa9.79□□□□□ -0.84
SRSF1-204ENST00000581979 WNK1Q9H4A3 2382 aa9.78□□□□□ -0.84
SRSF1-204ENST00000581979 CD5P06127 495 aa9.78□□□□□ -0.84
SRSF1-204ENST00000581979 OR5G3P0C626 314 aa9.78□□□□□ -0.84
SRSF1-204ENST00000581979 STAG3L2P0CL84 134 aa9.78□□□□□ -0.84
SRSF1-204ENST00000581979 STAG3L3P0CL85 134 aa9.78□□□□□ -0.84
SRSF1-204ENST00000581979 C10orf113Q5VZT2 155 aa9.78□□□□□ -0.84
SRSF1-204ENST00000581979 MIR17HGQ75NE6 70 aa9.78□□□□□ -0.84
SRSF1-204ENST00000581979 OR1B1Q8NGR6 318 aa9.78□□□□□ -0.84
SRSF1-204ENST00000581979 TMEM37Q8WXS4 190 aa9.78□□□□□ -0.84
SRSF1-204ENST00000581979 EEF1AKMT3Q96AZ1 226 aa9.78□□□□□ -0.84
SRSF1-204ENST00000581979 TXN2Q99757 166 aa9.78□□□□□ -0.84
SRSF1-204ENST00000581979 RARRES2Q99969 163 aa9.78□□□□□ -0.84
SRSF1-204ENST00000581979 TMPRSS5Q9H3S3 457 aa9.78□□□□□ -0.84
SRSF1-204ENST00000581979 VWFP04275 2813 aa9.77□□□□□ -0.84
SRSF1-204ENST00000581979 TMEM218A2RU14 115 aa9.77□□□□□ -0.85
SRSF1-204ENST00000581979 CXorf1O96002 111 aa9.77□□□□□ -0.85
SRSF1-204ENST00000581979 TRGV3P03979 118 aa9.77□□□□□ -0.85
SRSF1-204ENST00000581979 RD3LP0DJH9 198 aa9.77□□□□□ -0.85
SRSF1-204ENST00000581979 PSG1P11464 419 aa9.77□□□□□ -0.85
SRSF1-204ENST00000581979 ORM2P19652 201 aa9.77□□□□□ -0.85
SRSF1-204ENST00000581979 MRPL32Q9BYC8 188 aaKnown RBP9.77□□□□□ -0.85
SRSF1-204ENST00000581979 PRSS22Q9GZN4 317 aa9.77□□□□□ -0.85
SRSF1-204ENST00000581979 NPFFR1Q9GZQ6 430 aa9.77□□□□□ -0.85
SRSF1-204ENST00000581979 TECRQ9NZ01 308 aaKnown RBP9.77□□□□□ -0.85
SRSF1-204ENST00000581979 ELOA3CA0A087WX78 387 aaPredicted RBP9.76□□□□□ -0.85
SRSF1-204ENST00000581979 LOC102723971A0A1B0GUV8 181 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 PSMB11A5LHX3 300 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 OR2T8A6NH00 312 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 H3BUA1 57 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 HYPMO75409 117 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 IGKV1-17P01599 117 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 ARL14EPLP0DKL9 152 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 PPIFP30405 207 aaKnown RBP9.76□□□□□ -0.85
SRSF1-204ENST00000581979 PSMB3P49720 205 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 TPPP2P59282 170 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 TAS2R45P59539 299 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 LYZP61626 148 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 ATP5G2Q06055 141 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 ZNF506Q5JVG8 444 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 RXFP4Q8TDU9 374 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 SCRT1Q9BWW7 348 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 FAM223BA6NKX1 122 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 C9JQL5 133 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 F8W036 122 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 F8W735 103 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 284.2 ms