RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 CFDP00746 253 aaPredicted RBP19.67■□□□□ 0.74
NME3-209ENST00000566600 RRAS2P62070 204 aaPredicted RBP19.67■□□□□ 0.74
NME3-209ENST00000566600 ZNF90Q03938 601 aa19.67■□□□□ 0.74
NME3-209ENST00000566600 STX12Q86Y82 276 aa19.67■□□□□ 0.74
NME3-209ENST00000566600 VSIRQ9H7M9 311 aa19.67■□□□□ 0.74
NME3-209ENST00000566600 NPVFQ9HCQ7 196 aa19.67■□□□□ 0.74
NME3-209ENST00000566600 SELENOKQ9Y6D0 94 aa19.67■□□□□ 0.74
NME3-209ENST00000566600 SMAD5-AS1Q9Y6J3 95 aa19.67■□□□□ 0.74
NME3-209ENST00000566600 IGKV1OR2-108A0A075B7D4 117 aa19.66■□□□□ 0.74
NME3-209ENST00000566600 FAM24AA6NFZ4 105 aa19.66■□□□□ 0.74
NME3-209ENST00000566600 E5RGE8 158 aa19.66■□□□□ 0.74
NME3-209ENST00000566600 TSPAN4O14817 238 aa19.66■□□□□ 0.74
NME3-209ENST00000566600 PET100P0DJ07 73 aa19.66■□□□□ 0.74
NME3-209ENST00000566600 LRRC37A5PQ49AS3 106 aa19.66■□□□□ 0.74
NME3-209ENST00000566600 PPP1R1CQ8WVI7 109 aa19.66■□□□□ 0.74
NME3-209ENST00000566600 RNF125Q96EQ8 232 aa19.66■□□□□ 0.74
NME3-209ENST00000566600 GRAMD2BQ96HH9 432 aa19.66■□□□□ 0.74
NME3-209ENST00000566600 RNF2Q99496 336 aa19.66■□□□□ 0.74
NME3-209ENST00000566600 SPAG8Q99932 426 aaPredicted RBP19.66■□□□□ 0.74
NME3-209ENST00000566600 PFDN2Q9UHV9 154 aa19.66■□□□□ 0.74
NME3-209ENST00000566600 IGHV3OR16-13A0A075B7E8 117 aa19.65■□□□□ 0.74
NME3-209ENST00000566600 IGHV3-74A0A0B4J1X5 117 aa19.65■□□□□ 0.74
NME3-209ENST00000566600 HNRNPCP07910 306 aaKnown RBP eCLIP19.65■□□□□ 0.74
NME3-209ENST00000566600 SULT1A1P50225 295 aa19.65■□□□□ 0.74
NME3-209ENST00000566600 ST8SIA2Q92186 375 aa19.65■□□□□ 0.74
NME3-209ENST00000566600 RABAC1Q9UI14 185 aa19.65■□□□□ 0.74
NME3-209ENST00000566600 SLC38A11Q08AI6 406 aa19.64■□□□□ 0.73
NME3-209ENST00000566600 ARL16Q0P5N6 197 aa19.64■□□□□ 0.73
NME3-209ENST00000566600 Q8N1Y9 231 aa19.64■□□□□ 0.73
NME3-209ENST00000566600 TMEM252Q8N6L7 170 aa19.64■□□□□ 0.73
NME3-209ENST00000566600 CST7O76096 145 aa19.63■□□□□ 0.73
NME3-209ENST00000566600 APOHP02749 345 aaPredicted RBP19.63■□□□□ 0.73
NME3-209ENST00000566600 S100A11P31949 105 aa19.63■□□□□ 0.73
NME3-209ENST00000566600 NUP62P37198 522 aaPredicted RBP19.63■□□□□ 0.73
NME3-209ENST00000566600 P2RY1P47900 373 aa19.63■□□□□ 0.73
NME3-209ENST00000566600 HBG1P69891 147 aa19.63■□□□□ 0.73
NME3-209ENST00000566600 HBG2P69892 147 aa19.63■□□□□ 0.73
NME3-209ENST00000566600 USF2Q15853 346 aaPredicted RBP19.63■□□□□ 0.73
NME3-209ENST00000566600 BPIFCQ8NFQ6 507 aa19.63■□□□□ 0.73
NME3-209ENST00000566600 SLC25A31Q9H0C2 315 aa19.63■□□□□ 0.73
NME3-209ENST00000566600 U3KQE9 123 aa19.63■□□□□ 0.73
NME3-209ENST00000566600 CD81P60033 236 aa19.62■□□□□ 0.73
NME3-209ENST00000566600 OR2F1Q13607 317 aa19.62■□□□□ 0.73
NME3-209ENST00000566600 TEPPQ6URK8 271 aa19.62■□□□□ 0.73
NME3-209ENST00000566600 TCF24Q7RTU0 167 aa19.62■□□□□ 0.73
NME3-209ENST00000566600 NEURL2Q9BR09 285 aa19.62■□□□□ 0.73
NME3-209ENST00000566600 PBDC1Q9BVG4 233 aa19.62■□□□□ 0.73
NME3-209ENST00000566600 OR5AC2Q9NZP5 309 aa19.62■□□□□ 0.73
NME3-209ENST00000566600 IGSF23A1L1A6 192 aa19.61■□□□□ 0.73
NME3-209ENST00000566600 OR4C46A6NHA9 309 aa19.61■□□□□ 0.73
NME3-209ENST00000566600 MPC2O95563 127 aa19.61■□□□□ 0.73
NME3-209ENST00000566600 CXCL3P19876 107 aa19.61■□□□□ 0.73
NME3-209ENST00000566600 EIF2B2P49770 351 aaKnown RBP19.61■□□□□ 0.73
NME3-209ENST00000566600 SELENOTP62341 195 aa19.61■□□□□ 0.73
NME3-209ENST00000566600 FCN2Q15485 313 aa19.61■□□□□ 0.73
NME3-209ENST00000566600 FAM90A2PQ658T7 463 aa19.61■□□□□ 0.73
NME3-209ENST00000566600 TMEM217Q8N7C4 229 aa19.61■□□□□ 0.73
NME3-209ENST00000566600 IGHV3-66A0A0C4DH42 116 aa19.6■□□□□ 0.73
NME3-209ENST00000566600 H0YIZ8 118 aa19.6■□□□□ 0.73
NME3-209ENST00000566600 LYZP61626 148 aa19.6■□□□□ 0.73
NME3-209ENST00000566600 PAFAH1B2P68402 229 aa19.6■□□□□ 0.73
NME3-209ENST00000566600 CYP2G1PQ6ZSU1 146 aa19.6■□□□□ 0.73
NME3-209ENST00000566600 LILRB2Q8N423 598 aa19.6■□□□□ 0.73
NME3-209ENST00000566600 ASB13Q8WXK3 278 aa19.6■□□□□ 0.73
NME3-209ENST00000566600 DFFBO76075 338 aa19.59■□□□□ 0.73
NME3-209ENST00000566600 ATP6V1FQ16864 119 aa19.59■□□□□ 0.73
NME3-209ENST00000566600 OR11H7Q8NGC8 314 aa19.59■□□□□ 0.73
NME3-209ENST00000566600 UQCC1Q9NVA1 299 aa19.59■□□□□ 0.73
NME3-209ENST00000566600 HELTA6NFD8 242 aa19.58■□□□□ 0.72
NME3-209ENST00000566600 CD7P09564 240 aa19.58■□□□□ 0.72
NME3-209ENST00000566600 S100A7P31151 101 aa19.58■□□□□ 0.72
NME3-209ENST00000566600 RPL11P62913 178 aaKnown RBP19.58■□□□□ 0.72
NME3-209ENST00000566600 TMEM147Q9BVK8 224 aa19.58■□□□□ 0.72
NME3-209ENST00000566600 SLC45A2Q9UMX9 530 aa19.58■□□□□ 0.72
NME3-209ENST00000566600 A8MZ25 164 aa19.57■□□□□ 0.72
NME3-209ENST00000566600 AP2S1P53680 142 aaPredicted RBP19.57■□□□□ 0.72
NME3-209ENST00000566600 BAXQ07812 192 aa19.57■□□□□ 0.72
NME3-209ENST00000566600 RAB31Q13636 194 aa19.57■□□□□ 0.72
NME3-209ENST00000566600 VWC2Q2TAL6 325 aa19.57■□□□□ 0.72
NME3-209ENST00000566600 C16orf54Q6UWD8 224 aa19.57■□□□□ 0.72
NME3-209ENST00000566600 B9D2Q9BPU9 175 aa19.57■□□□□ 0.72
NME3-209ENST00000566600 RNF126Q9BV68 326 aa19.57■□□□□ 0.72
NME3-209ENST00000566600 BUB3O43684 328 aa19.56■□□□□ 0.72
NME3-209ENST00000566600 IGHV4-30-4P0DP06 118 aa19.56■□□□□ 0.72
NME3-209ENST00000566600 CMC4P56277 68 aaPredicted RBP19.56■□□□□ 0.72
NME3-209ENST00000566600 EWSR1Q01844 656 aaKnown RBP eCLIP19.56■□□□□ 0.72
NME3-209ENST00000566600 ZNF546Q86UE3 836 aa19.56■□□□□ 0.72
NME3-209ENST00000566600 PRKDCP78527 4128 aaKnown RBP19.56■□□□□ 0.72
NME3-209ENST00000566600 TRAV2A0A0B4J234 112 aa19.55■□□□□ 0.72
NME3-209ENST00000566600 OR11H12B2RN74 326 aa19.55■□□□□ 0.72
NME3-209ENST00000566600 DNASE2O00115 360 aaPredicted RBP19.55■□□□□ 0.72
NME3-209ENST00000566600 GATA2P23769 480 aaPredicted RBP19.55■□□□□ 0.72
NME3-209ENST00000566600 THAP6Q8TBB0 222 aa19.55■□□□□ 0.72
NME3-209ENST00000566600 GLMPQ8WWB7 406 aa19.55■□□□□ 0.72
NME3-209ENST00000566600 PPP1R14BQ96C90 147 aa19.55■□□□□ 0.72
NME3-209ENST00000566600 TUBA4BQ9H853 241 aa19.55■□□□□ 0.72
NME3-209ENST00000566600 IGKV3-7A0A075B6H7 116 aa19.54■□□□□ 0.72
NME3-209ENST00000566600 AGPAT2O15120 278 aa19.54■□□□□ 0.72
NME3-209ENST00000566600 GIPP09681 153 aaPredicted RBP19.54■□□□□ 0.72
NME3-209ENST00000566600 NHLH2Q02577 135 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms