RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 COX7A2P2O60397 106 aa9.92□□□□□ -0.82
CLK3-214ENST00000564096 GGCTO75223 188 aaKnown RBP9.92□□□□□ -0.82
CLK3-214ENST00000564096 CTSGP08311 255 aa9.92□□□□□ -0.82
CLK3-214ENST00000564096 M6PRP20645 277 aa9.92□□□□□ -0.82
CLK3-214ENST00000564096 LYZP61626 148 aa9.92□□□□□ -0.82
CLK3-214ENST00000564096 ZNF90Q03938 601 aa9.92□□□□□ -0.82
CLK3-214ENST00000564096 DMRTA1Q5VZB9 504 aa9.92□□□□□ -0.82
CLK3-214ENST00000564096 KLHL30-AS1Q8NEE0 82 aa9.92□□□□□ -0.82
CLK3-214ENST00000564096 ZNF680Q8NEM1 530 aa9.92□□□□□ -0.82
CLK3-214ENST00000564096 RNF2Q99496 336 aa9.92□□□□□ -0.82
CLK3-214ENST00000564096 C19orf24Q9BVV8 132 aa9.92□□□□□ -0.82
CLK3-214ENST00000564096 ELOA3CA0A087WX78 387 aaPredicted RBP9.91□□□□□ -0.82
CLK3-214ENST00000564096 ANKRD34BA5PLL1 514 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 PPP5D1E7EU14 171 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 BMPR1BO00238 502 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 RGS13O14921 159 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 OR2C1O95371 312 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 IL4P05112 153 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 PSG1P11464 419 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 ZP3P21754 424 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 SULT1A2P50226 295 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 RAB14P61106 215 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 RPEL1Q2QD12 228 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 LCE2DQ5TA82 110 aaPredicted RBP9.91□□□□□ -0.82
CLK3-214ENST00000564096 RNF125Q96EQ8 232 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 OR5B12Q96R08 314 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 CHRDL1Q9BU40 450 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 PBDC1Q9BVG4 233 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 PFDN2Q9UHV9 154 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 RNF24Q9Y225 148 aa9.91□□□□□ -0.82
CLK3-214ENST00000564096 NDUFA4O00483 81 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 HYPMO75409 117 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 YIF1AO95070 293 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 CD28P10747 220 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 ADMP35318 185 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 RHOBP62745 196 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 KIAA0141Q14154 515 aaPredicted RBP9.9□□□□□ -0.82
CLK3-214ENST00000564096 TCTEX1D4Q5JR98 221 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 FAM74A1Q5RGS3 127 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 OR10G4Q8NGN3 311 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 OR10G9Q8NGN4 311 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 OR10G7Q8NGN6 311 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 OR1B1Q8NGR6 318 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 FAM213BQ8TBF2 198 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 GATAD1Q8WUU5 269 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 MRPL32Q9BYC8 188 aaKnown RBP9.9□□□□□ -0.82
CLK3-214ENST00000564096 HIGD1AQ9Y241 93 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 PUS1Q9Y606 427 aaKnown RBP eCLIP9.9□□□□□ -0.82
CLK3-214ENST00000564096 ZFHX3Q15911 3703 aa9.9□□□□□ -0.82
CLK3-214ENST00000564096 A0A1W2PPV4 95 aa9.89□□□□□ -0.83
CLK3-214ENST00000564096 ZNF705EA8MWA4 302 aaPredicted RBP9.89□□□□□ -0.83
CLK3-214ENST00000564096 TEX46H3BTG2 121 aa9.89□□□□□ -0.83
CLK3-214ENST00000564096 HSPB1P04792 205 aaKnown RBP9.89□□□□□ -0.83
CLK3-214ENST00000564096 OR5G3P0C626 314 aa9.89□□□□□ -0.83
CLK3-214ENST00000564096 ORM2P19652 201 aa9.89□□□□□ -0.83
CLK3-214ENST00000564096 GATA2P23769 480 aaPredicted RBP9.89□□□□□ -0.83
CLK3-214ENST00000564096 CDC34P49427 236 aaPredicted RBP9.89□□□□□ -0.83
CLK3-214ENST00000564096 PLP1P60201 277 aa9.89□□□□□ -0.83
CLK3-214ENST00000564096 RAB2AP61019 212 aa9.89□□□□□ -0.83
CLK3-214ENST00000564096 BLOC1S1P78537 153 aa9.89□□□□□ -0.83
CLK3-214ENST00000564096 FAM106AQ4KMX7 169 aa9.89□□□□□ -0.83
CLK3-214ENST00000564096 AWAT1Q58HT5 328 aa9.89□□□□□ -0.83
CLK3-214ENST00000564096 C10orf113Q5VZT2 155 aa9.89□□□□□ -0.83
CLK3-214ENST00000564096 C11orf44Q8N8P7 122 aa9.89□□□□□ -0.83
CLK3-214ENST00000564096 DPF1Q92782 380 aa9.89□□□□□ -0.83
CLK3-214ENST00000564096 NARS2Q96I59 477 aaKnown RBP9.89□□□□□ -0.83
CLK3-214ENST00000564096 CITED2Q99967 270 aaPredicted RBP9.89□□□□□ -0.83
CLK3-214ENST00000564096 ACTR3CQ9C0K3 210 aaPredicted RBP9.89□□□□□ -0.83
CLK3-214ENST00000564096 DOK5Q9P104 306 aa9.89□□□□□ -0.83
CLK3-214ENST00000564096 CTXND1A0A1B0GTU2 59 aa9.88□□□□□ -0.83
CLK3-214ENST00000564096 LINC01619G3V211 115 aa9.88□□□□□ -0.83
CLK3-214ENST00000564096 I3L521 148 aa9.88□□□□□ -0.83
CLK3-214ENST00000564096 TRBV12-3P01733 135 aa9.88□□□□□ -0.83
CLK3-214ENST00000564096 TAS2R45P59539 299 aa9.88□□□□□ -0.83
CLK3-214ENST00000564096 IFITM2Q01629 132 aa9.88□□□□□ -0.83
CLK3-214ENST00000564096 FAM122CQ6P4D5 195 aa9.88□□□□□ -0.83
CLK3-214ENST00000564096 NDUFA11Q86Y39 141 aa9.88□□□□□ -0.83
CLK3-214ENST00000564096 TMEM190Q8WZ59 177 aa9.88□□□□□ -0.83
CLK3-214ENST00000564096 METTL26Q96S19 204 aa9.88□□□□□ -0.83
CLK3-214ENST00000564096 SLC25A22Q9H936 323 aa9.88□□□□□ -0.83
CLK3-214ENST00000564096 RABAC1Q9UI14 185 aa9.88□□□□□ -0.83
CLK3-214ENST00000564096 IGHV4OR15-8A0A075B7B6 117 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 A0A087WW49 117 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 WI2-2373I1.2A0A1W2PRP0 233 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 A0A1W2PRX2 142 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 SEC14L6B5MCN3 397 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 HBE1P02100 147 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 BMI1P35226 326 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 KRTAP24-1Q3LI83 254 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 KHDC3LQ587J8 217 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 FAM78BQ5VT40 261 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 TOMM20LQ6UXN7 152 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 C1QL4Q86Z23 238 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 TMEM158Q8WZ71 300 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 SAT2Q96F10 170 aaPredicted RBP9.87□□□□□ -0.83
CLK3-214ENST00000564096 RCC1LQ96I51 464 aaKnown RBP9.87□□□□□ -0.83
CLK3-214ENST00000564096 C20orf24Q9BUV8 137 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 ZFAND3Q9H8U3 227 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 DNAJC4Q9NNZ3 241 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 RPRMQ9NS64 109 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms