RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 H3BP45 60 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 K7EIM0 57 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 WRBO00258 174 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 SYNGR2O43760 224 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 SSSCA1O60232 199 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 MED6O75586 246 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 OR2J3O76001 311 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 NDUFB8O95169 186 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 GIPP09681 153 aaPredicted RBP4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 NPY1RP25929 384 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 RAB9AP51151 201 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 SSTP61278 116 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 SLC35B1P78383 322 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 ERHP84090 104 aaKnown RBP4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 RHOGP84095 191 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 KRTAP15-1Q3LI76 137 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 C18orf65Q6ZTR6 163 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 OR1P1Q8NH06 330 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 PPP1R1CQ8WVI7 109 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 CITED1Q99966 193 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 NMES1Q9C002 83 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 ZNF436Q9C0F3 470 aaPredicted RBP4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 GNB4Q9HAV0 340 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 DNAJC4Q9NNZ3 241 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 TREM1Q9NP99 234 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 ENY2Q9NPA8 101 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 OR5AC2Q9NZP5 309 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 CACFD1Q9UGQ2 172 aa4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 LSM5Q9Y4Y9 91 aaKnown RBP4.01□□□□□ -1.77
HERPUD1-207ENST00000563781 PKD1L1Q8TDX9 2849 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 A0A087X0K7 114 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 FAM223BA6NKX1 122 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 PMS2P5A8MQ11 134 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 PRSS46E5RG02 174 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 H0Y8G0 127 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 I3L2K1 104 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 I3L521 148 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 DEDDO75618 318 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 CCNKO75909 580 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 MPC2O95563 127 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 TRGV3P03979 118 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 HIST1H1BP16401 226 aaKnown RBP4□□□□□ -1.77
HERPUD1-207ENST00000563781 SNCAP37840 140 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 TPPP2P59282 170 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 TAS2R30P59541 319 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 S100A10P60903 97 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 RPL23AP62750 156 aaKnown RBP4□□□□□ -1.77
HERPUD1-207ENST00000563781 CYCSP99999 105 aaKnown RBP4□□□□□ -1.77
HERPUD1-207ENST00000563781 ARL16Q0P5N6 197 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 LRRC37A5PQ49AS3 106 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 C2orf83Q53S99 150 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 Q5BKY6 102 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 BTNL8Q6UX41 500 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 TMEM14EPQ6UXP3 125 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 FAM223AQ8IWN6 122 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 ZNF491Q8N8L2 437 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 OR4X2Q8NGF9 303 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 TMEM18Q96B42 140 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 ZNF414Q96IQ9 312 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 SMIM8Q96KF7 97 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 CIB3Q96Q77 187 aaPredicted RBP4□□□□□ -1.77
HERPUD1-207ENST00000563781 RAB40CQ96S21 281 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 RNF126Q9BV68 326 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 KRTAP4-5Q9BYR2 181 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 VCX2Q9H322 139 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 FNDC4Q9H6D8 234 aaPredicted RBP4□□□□□ -1.77
HERPUD1-207ENST00000563781 SLA2Q9H6Q3 261 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 ZNF355PQ9NSJ1 428 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 MRPL36Q9P0J6 103 aaKnown RBP4□□□□□ -1.77
HERPUD1-207ENST00000563781 MBD2Q9UBB5 411 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 U3KQ87 197 aa4□□□□□ -1.77
HERPUD1-207ENST00000563781 TET2Q6N021 2002 aaPredicted RBP3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 IGHV3-21A0A0B4J1V1 117 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 TCRBV4S1A1TA0A5B7 111 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 IGSF23A1L1A6 192 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 FAM24AA6NFZ4 105 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 MT-CO2P00403 227 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 IFNA10P01566 189 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 TRBV12-3P01733 135 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 IGHV3-11P01762 117 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 IGHV3-48P01763 117 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 LGALS1P09382 135 aaKnown RBP3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 DEFA4P12838 97 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 BCAP31P51572 246 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 ATP5IP56385 69 aaPredicted RBP3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 RUNX1Q01196 453 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 EXOSC2Q13868 293 aaKnown RBP3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 C15orf32Q32M92 178 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 TMEM41BQ5BJD5 291 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 SPANXN5Q5MJ07 72 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 ZNF343Q6P1L6 599 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 PRSS54Q6PEW0 395 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 C12orf54Q6X4T0 127 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 NDUFA11Q86Y39 141 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 NECAP1Q8NC96 275 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 OR1L6Q8NGR2 347 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 ZNF502Q8TBZ5 544 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 RNASEH2CQ8TDP1 164 aaKnown RBP3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 VN1R17PQ8TDU5 208 aa3.99□□□□□ -1.77
HERPUD1-207ENST00000563781 SCARB1Q8WTV0 552 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms