RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 RPP25LQ8N5L8 163 aaKnown RBP7.86□□□□□ -1.15
SMG1-208ENST00000563448 ZNF491Q8N8L2 437 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 MYOZ3Q8TDC0 251 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 WIPF2Q8TF74 440 aaPredicted RBP7.86□□□□□ -1.15
SMG1-208ENST00000563448 SAT2Q96F10 170 aaPredicted RBP7.86□□□□□ -1.15
SMG1-208ENST00000563448 ATP6V0BQ99437 205 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.86□□□□□ -1.15
SMG1-208ENST00000563448 A0A0G2JLM5 398 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 PPP5D1E7EU14 171 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 TGOLN2O43493 480 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 EIF3GO75821 320 aaKnown RBP eCLIP7.86□□□□□ -1.15
SMG1-208ENST00000563448 BLOC1S1P78537 153 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 ZNF343Q6P1L6 599 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 FAM122CQ6P4D5 195 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 PATE2Q6UY27 113 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 OR5AU1Q8NGC0 362 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 GAR1Q9NY12 217 aaKnown RBP7.86□□□□□ -1.15
SMG1-208ENST00000563448 TRBV12-3P01733 135 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 RD3LP0DJH9 198 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 TCTEX1D4Q5JR98 221 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 PXDC1Q5TGL8 231 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 COMMD1Q8N668 190 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 OR4X2Q8NGF9 303 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 TMEM37Q8WXS4 190 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 GNB4Q9HAV0 340 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 NF1P21359 2839 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 WI2-2373I1.2A0A1W2PRP0 233 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 SEC14L6B5MCN3 397 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 NUPL2O15504 423 aaKnown RBP7.85□□□□□ -1.15
SMG1-208ENST00000563448 PLP1P60201 277 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 SPATA31B1PQ5VZV4 182 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 OR51G1Q8NGK1 321 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 RCC1LQ96I51 464 aaKnown RBP7.85□□□□□ -1.15
SMG1-208ENST00000563448 SLC25A22Q9H936 323 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 SEPSECSQ9HD40 501 aaKnown RBP7.85□□□□□ -1.15
SMG1-208ENST00000563448 DOK5Q9P104 306 aa7.85□□□□□ -1.15
SMG1-208ENST00000563448 CTXND1A0A1B0GTU2 59 aa7.84□□□□□ -1.15
SMG1-208ENST00000563448 HMGB3O15347 200 aaKnown RBP7.84□□□□□ -1.15
SMG1-208ENST00000563448 SCGB2A1O75556 95 aa7.84□□□□□ -1.15
SMG1-208ENST00000563448 FABP1P07148 127 aa7.84□□□□□ -1.15
SMG1-208ENST00000563448 H2AFB1P0C5Y9 115 aa7.84□□□□□ -1.15
SMG1-208ENST00000563448 OR5G3P0C626 314 aa7.84□□□□□ -1.15
SMG1-208ENST00000563448 ARL3P36405 182 aa7.84□□□□□ -1.15
SMG1-208ENST00000563448 CDC34P49427 236 aaPredicted RBP7.84□□□□□ -1.15
SMG1-208ENST00000563448 SPSB3Q6PJ21 355 aa7.84□□□□□ -1.15
SMG1-208ENST00000563448 ZNF600Q6ZNG1 722 aa7.84□□□□□ -1.15
SMG1-208ENST00000563448 LYPD6BQ8NI32 183 aa7.84□□□□□ -1.15
SMG1-208ENST00000563448 Q8WTZ3 238 aa7.84□□□□□ -1.15
SMG1-208ENST00000563448 MBD3L1Q8WWY6 194 aa7.84□□□□□ -1.15
SMG1-208ENST00000563448 RAB24Q969Q5 203 aa7.84□□□□□ -1.15
SMG1-208ENST00000563448 UBE2E2Q96LR5 201 aa7.84□□□□□ -1.15
SMG1-208ENST00000563448 OR5B12Q96R08 314 aa7.84□□□□□ -1.15
SMG1-208ENST00000563448 ACTR3CQ9C0K3 210 aaPredicted RBP7.84□□□□□ -1.15
SMG1-208ENST00000563448 DNAJC4Q9NNZ3 241 aa7.84□□□□□ -1.15
SMG1-208ENST00000563448 IGHV3-35A0A0C4DH35 117 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 OR2C1O95371 312 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 IL4P05112 153 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 ORM2P19652 201 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 LYZP61626 148 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 RHOBP62745 196 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 FAM78BQ5VT40 261 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 C10orf113Q5VZT2 155 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 HIST2H2BDQ6DRA6 164 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 LCN15Q6UWW0 184 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 OR1L4Q8NGR5 311 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 OR1B1Q8NGR6 318 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 OR4F5Q8NH21 305 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 GATAD1Q8WUU5 269 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 RNF125Q96EQ8 232 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 PFDN5Q99471 154 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 C19orf24Q9BVV8 132 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 HRH4Q9H3N8 390 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 PEF1Q9UBV8 284 aaKnown RBP7.83□□□□□ -1.16
SMG1-208ENST00000563448 RNF114Q9Y508 228 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 PUS1Q9Y606 427 aaKnown RBP eCLIP7.83□□□□□ -1.16
SMG1-208ENST00000563448 A0A1B0GV50 99 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 A0A1W2PPV4 95 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 CLPSL1A2RUU4 121 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 TEX46H3BTG2 121 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 HAX1O00165 279 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 BMPR1BO00238 502 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 COX7A2P2O60397 106 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 HYPMO75409 117 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 FGF8P55075 233 aaPredicted RBP7.83□□□□□ -1.16
SMG1-208ENST00000563448 PROK1P58294 105 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 USF2Q15853 346 aaPredicted RBP7.83□□□□□ -1.16
SMG1-208ENST00000563448 TOR2AQ5JU69 321 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 MORN5Q5VZ52 161 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 TOMM20LQ6UXN7 152 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 C18orf65Q6ZTR6 163 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 MIR17HGQ75NE6 70 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 SFT2D1Q8WV19 159 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 UHRF2Q96PU4 802 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 PBDC1Q9BVG4 233 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 ZFAND3Q9H8U3 227 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 MRPL27Q9P0M9 148 aaKnown RBP7.83□□□□□ -1.16
SMG1-208ENST00000563448 FUT9Q9Y231 359 aa7.83□□□□□ -1.16
SMG1-208ENST00000563448 MAP1LC3B2A6NCE7 125 aa7.82□□□□□ -1.16
SMG1-208ENST00000563448 LGALS1P09382 135 aaKnown RBP7.82□□□□□ -1.16
SMG1-208ENST00000563448 STAG3L2P0CL84 134 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms