RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 SRSF10O75494 262 aaKnown RBP3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 CDRT1O95170 752 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 IGLV1-44P01699 117 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 IGHV3-23P01764 117 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 ZNF32P17041 273 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 CDK2P24941 298 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 PSMB3P49720 205 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 HERVK_113P63121 156 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 BSPH1Q075Z2 132 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 TFF3Q07654 80 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 RSPO1Q2MKA7 263 aaPredicted RBP3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 TIMM50Q3ZCQ8 353 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 C11orf87Q6NUJ2 197 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 C9orf47Q6ZRZ4 202 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 TCF24Q7RTU0 167 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 MDP1Q86V88 176 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 EXOC3-AS1Q8N2X6 119 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 OR5D14Q8NGL3 314 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 OR8S1Q8NH09 359 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 OTOSQ8NHW6 89 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 SLAMF6Q96DU3 332 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 ZNF799Q96GE5 643 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 PBDC1Q9BVG4 233 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 SH3BGRL3Q9H299 93 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 HEXA-AS1Q9H8Q6 139 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 NOX3Q9HBY0 568 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 MPC1Q9Y5U8 109 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 FASNP49327 2511 aaKnown RBP3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 TLN1Q9Y490 2541 aaKnown RBP3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 HEATR5AQ86XA9 2040 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 DMXL2Q8TDJ6 3036 aa3.77□□□□□ -1.81
VPS35P1-201ENST00000563400 C5orf63A6NC05 138 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 CCDC160A6NGH7 325 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 TMEM212A6NML5 194 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 LGALS9O00182 355 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 C1QCP02747 245 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 AMBPP02760 352 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 CSN2P05814 226 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 PIPP12273 146 aaPredicted RBP3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 SLC25A16P16260 332 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 GABRR1P24046 479 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 EFNA4P52798 201 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 LINC00205P59089 165 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 PPP3R1P63098 170 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 ZNF616Q08AN1 781 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 BCL2L15Q5TBC7 163 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 C12orf73Q69YU5 71 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 ZNF322Q6U7Q0 402 aaPredicted RBP3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 IDO2Q6ZQW0 420 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 ZNF429Q86V71 674 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 Q8IYB0 196 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 GDPD1Q8N9F7 314 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 RHOXF1Q8NHV9 184 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 GTSF1Q8WW33 167 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 PP6455Q8WZ26 134 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 C12orf57Q99622 126 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 HSD17B10Q99714 261 aaKnown RBP3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 MND1Q9BWT6 205 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 YLPM1P49750 1951 aaKnown RBP3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 EML6Q6ZMW3 1958 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 DIDO1Q9BTC0 2240 aaKnown RBP3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 FREM3P0C091 2139 aa3.76□□□□□ -1.81
VPS35P1-201ENST00000563400 AKAP13Q12802 2813 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 IGLV7-46A0A075B6I9 117 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 IGHV3OR16-10A0A075B7F0 116 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 A0A1B0GV50 99 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 C17orf51A8MQB3 221 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 TMEM250H0YL14 139 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 H7C1C5 153 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 DLEU1O43261 78 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 IGHV3-13P01766 116 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 IGHG2P01859 326 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 HLA-DRB1P01911 266 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 ZNF14P17017 642 aaPredicted RBP3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 RPL7P18124 248 aaKnown RBP3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 EMP1P54849 157 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 LCN6P62502 163 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 RHEBQ15382 184 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 MPPED2Q15777 294 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 C12orf74Q32Q52 190 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 ZFP69Q49AA0 526 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 RPL22L1Q6P5R6 122 aaKnown RBP3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 UNQ9165/PRO28630Q6UXU0 137 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 RPRMLQ8N4K4 120 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 WFDC6Q9BQY6 131 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 RTL8AQ9BWD3 113 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 SPANXA1Q9NS26 97 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 ARHGAP21Q5T5U3 1957 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 FREM2Q5SZK8 3169 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 LOC102724200A0A096LPH7 203 aaPredicted RBP3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 TRAV8-1A0A0A6YYK1 113 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 TRAV38-1A0A0B4J264 116 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 IGHV1-18A0A0C4DH31 117 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 A0A1B0GUV1 79 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 DPRXA6NFQ7 191 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 EPM2AB3EWF7 344 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 CLDN25C9JDP6 229 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 M0R381 172 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 PDCD5O14737 125 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms