RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 DFFBO76075 338 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 CD5P06127 495 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 CSN3P07498 182 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 PSG1P11464 419 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 EIF2B2P49770 351 aaKnown RBP7.67□□□□□ -1.18
USP3-216ENST00000559873 VWC2Q2TAL6 325 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 TM4SF20Q53R12 229 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 OXLD1Q5BKU9 147 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 RNF125Q96EQ8 232 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 RNF126Q9BV68 326 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 ZFAND3Q9H8U3 227 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 RABAC1Q9UI14 185 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 HSPB11Q9Y547 144 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 IGKV1D-37A0A075B6S9 117 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 FXYD6-FXYD2A0A087WZ82 144 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 G3V4G9 280 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 IGLV1-51P01701 117 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 HNRNPCP07910 306 aaKnown RBP eCLIP7.66□□□□□ -1.189e-7■■■□□ 16.3
USP3-216ENST00000559873 CBLN1P23435 193 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 NPPCP23582 126 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 CAMLGP49069 296 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 LYZP61626 148 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 NHLH2Q02577 135 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 ZNF90Q03938 601 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 ARL16Q0P5N6 197 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 CLINT1Q14677 625 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 PXDC1Q5TGL8 231 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 LAMTOR1Q6IAA8 161 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 CYP2G1PQ6ZSU1 146 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 AQP10Q96PS8 301 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 ATP5SQ99766 215 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 PBDC1Q9BVG4 233 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 RNF24Q9Y225 148 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 WDR83OSQ9Y284 106 aa7.66□□□□□ -1.18
USP3-216ENST00000559873 LSM4Q9Y4Z0 139 aaKnown RBP7.66□□□□□ -1.18
USP3-216ENST00000559873 hCG_2014768A0A024R1R8 64 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 IGKV1OR2-108A0A075B7D4 117 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 IGHV3OR16-8A0A075B7F1 116 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 C17orf112F2Z3M2 114 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 ZNF207O43670 478 aaKnown RBP7.65□□□□□ -1.18
USP3-216ENST00000559873 IFNA5P01569 189 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 LINC00869P0C866 280 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 C8orf88P0DMB2 117 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 FGF7P21781 194 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 AP2S1P53680 142 aaPredicted RBP7.65□□□□□ -1.18
USP3-216ENST00000559873 EGFEM1PQ0D2K5 195 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 OR2F1Q13607 317 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 ZNF266Q14584 549 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 KPRPQ5T749 579 aaPredicted RBP7.65□□□□□ -1.18
USP3-216ENST00000559873 BTNL8Q6UX41 500 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 IL34Q6ZMJ4 242 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 RBPMS2Q6ZRY4 209 aaKnown RBP7.65□□□□□ -1.18
USP3-216ENST00000559873 NBEAL1Q6ZS30 2694 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 AKAP14Q86UN6 197 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 CMYA5Q8N3K9 4069 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 ZNF709Q8N972 641 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 PKD1L1Q8TDX9 2849 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 PPP1R14BQ96C90 147 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 RHPN1-AS1Q9BWJ2 59 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 SMPXQ9UHP9 88 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 SLC45A2Q9UMX9 530 aa7.65□□□□□ -1.18
USP3-216ENST00000559873 TRAV25A0A0B4J276 109 aa7.64□□□□□ -1.19
USP3-216ENST00000559873 WI2-2373I1.2A0A1W2PRP0 233 aa7.64□□□□□ -1.19
USP3-216ENST00000559873 HELTA6NFD8 242 aa7.64□□□□□ -1.19
USP3-216ENST00000559873 AGPAT2O15120 278 aa7.64□□□□□ -1.19
USP3-216ENST00000559873 ARPC5O15511 151 aa7.64□□□□□ -1.19
USP3-216ENST00000559873 CRYBB3P26998 211 aa7.64□□□□□ -1.19
USP3-216ENST00000559873 USF2Q15853 346 aaPredicted RBP7.64□□□□□ -1.19
USP3-216ENST00000559873 BEAN1Q3B7T3 259 aa7.64□□□□□ -1.19
USP3-216ENST00000559873 Q6ZRG5 221 aa7.64□□□□□ -1.19
USP3-216ENST00000559873 SCGB1C1Q8TD33 95 aa7.64□□□□□ -1.19
USP3-216ENST00000559873 CHAC2Q8WUX2 184 aa7.64□□□□□ -1.19
USP3-216ENST00000559873 TNFSF18Q9UNG2 199 aa7.64□□□□□ -1.19
USP3-216ENST00000559873 ZNF256Q9Y2P7 627 aaPredicted RBP7.64□□□□□ -1.19
USP3-216ENST00000559873 CHEK1O14757 476 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 ORM2P19652 201 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 OPCMLQ14982 345 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 DEFB114Q30KQ6 69 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 CD300EQ496F6 205 aaPredicted RBP7.63□□□□□ -1.19
USP3-216ENST00000559873 GTSCR1Q86UQ5 136 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 TCTE3Q8IZS6 198 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 STPG3Q8N7X2 389 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 OR1B1Q8NGR6 318 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 ZNF414Q96IQ9 312 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 PFDN5Q99471 154 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 MGST2Q99735 147 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 SPAG8Q99932 426 aaPredicted RBP7.63□□□□□ -1.19
USP3-216ENST00000559873 NPCDR1Q9BY65 106 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 PARD6GQ9BYG4 376 aaPredicted RBP7.63□□□□□ -1.19
USP3-216ENST00000559873 SMIM3Q9BZL3 60 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 VSIRQ9H7M9 311 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 FBXL17Q9UF56 701 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 MLXQ9UH92 298 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 HIGD1AQ9Y241 93 aa7.63□□□□□ -1.19
USP3-216ENST00000559873 IGHV3OR16-13A0A075B7E8 117 aa7.62□□□□□ -1.19
USP3-216ENST00000559873 IGHV3-49A0A0A0MS15 119 aa7.62□□□□□ -1.19
USP3-216ENST00000559873 BORCS7-ASMTA0A0B4J1R7 106 aa7.62□□□□□ -1.19
USP3-216ENST00000559873 IGHV3-74A0A0B4J1X5 117 aa7.62□□□□□ -1.19
USP3-216ENST00000559873 OR4C46A6NHA9 309 aa7.62□□□□□ -1.19
USP3-216ENST00000559873 COX7A2P2O60397 106 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms