RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 ZNF90Q03938 601 aa16.29■□□□□ 0.2
NEK3-202ENST00000550841 VWC2Q2TAL6 325 aa16.29■□□□□ 0.2
NEK3-202ENST00000550841 BPIFCQ8NFQ6 507 aa16.29■□□□□ 0.2
NEK3-202ENST00000550841 OR5C1Q8NGR4 320 aa16.29■□□□□ 0.2
NEK3-202ENST00000550841 OR2K2Q8NGT1 345 aa16.29■□□□□ 0.2
NEK3-202ENST00000550841 NARS2Q96I59 477 aaKnown RBP16.29■□□□□ 0.2
NEK3-202ENST00000550841 ZNF414Q96IQ9 312 aa16.29■□□□□ 0.2
NEK3-202ENST00000550841 METTL26Q96S19 204 aa16.29■□□□□ 0.2
NEK3-202ENST00000550841 PFDN2Q9UHV9 154 aa16.29■□□□□ 0.2
NEK3-202ENST00000550841 HSPB11Q9Y547 144 aa16.29■□□□□ 0.2
NEK3-202ENST00000550841 PKD1L1Q8TDX9 2849 aa16.29■□□□□ 0.2
NEK3-202ENST00000550841 IGHV3OR16-8A0A075B7F1 116 aa16.28■□□□□ 0.2
NEK3-202ENST00000550841 IL4P05112 153 aa16.28■□□□□ 0.2
NEK3-202ENST00000550841 Q5BKY6 102 aa16.28■□□□□ 0.2
NEK3-202ENST00000550841 CYP2G1PQ6ZSU1 146 aa16.28■□□□□ 0.2
NEK3-202ENST00000550841 ZNF546Q86UE3 836 aa16.28■□□□□ 0.2
NEK3-202ENST00000550841 INO80EQ8NBZ0 244 aaPredicted RBP16.28■□□□□ 0.2
NEK3-202ENST00000550841 SMPXQ9UHP9 88 aa16.28■□□□□ 0.2
NEK3-202ENST00000550841 IGHV7-4-1A0A0J9YVY3 117 aa16.27■□□□□ 0.2
NEK3-202ENST00000550841 WI2-2373I1.2A0A1W2PRP0 233 aa16.27■□□□□ 0.2
NEK3-202ENST00000550841 A0A1W2PS18 150 aa16.27■□□□□ 0.2
NEK3-202ENST00000550841 ZNF207O43670 478 aaKnown RBP16.27■□□□□ 0.2
NEK3-202ENST00000550841 DFFBO76075 338 aa16.27■□□□□ 0.2
NEK3-202ENST00000550841 IGLV1-51P01701 117 aa16.27■□□□□ 0.2
NEK3-202ENST00000550841 S100A7P31151 101 aa16.27■□□□□ 0.2
NEK3-202ENST00000550841 TMEM231Q9H6L2 316 aa16.27■□□□□ 0.2
NEK3-202ENST00000550841 LSM4Q9Y4Z0 139 aaKnown RBP16.27■□□□□ 0.2
NEK3-202ENST00000550841 MPDU1O75352 247 aa16.26■□□□□ 0.19
NEK3-202ENST00000550841 OR2F1Q13607 317 aa16.26■□□□□ 0.19
NEK3-202ENST00000550841 DEFB114Q30KQ6 69 aa16.26■□□□□ 0.19
NEK3-202ENST00000550841 ADAMTSL5Q6ZMM2 481 aa16.26■□□□□ 0.19
NEK3-202ENST00000550841 RNF125Q96EQ8 232 aa16.26■□□□□ 0.19
NEK3-202ENST00000550841 WDR83OSQ9Y284 106 aa16.26■□□□□ 0.19
NEK3-202ENST00000550841 FXYD6-FXYD2A0A087WZ82 144 aa16.25■□□□□ 0.19
NEK3-202ENST00000550841 CD5P06127 495 aa16.25■□□□□ 0.19
NEK3-202ENST00000550841 HNRNPCP07910 306 aaKnown RBP eCLIP16.25■□□□□ 0.19
NEK3-202ENST00000550841 CRYBB3P26998 211 aa16.25■□□□□ 0.19
NEK3-202ENST00000550841 EGFEM1PQ0D2K5 195 aa16.25■□□□□ 0.19
NEK3-202ENST00000550841 KPRPQ5T749 579 aaPredicted RBP16.25■□□□□ 0.19
NEK3-202ENST00000550841 BTNL8Q6UX41 500 aa16.25■□□□□ 0.19
NEK3-202ENST00000550841 AQP10Q96PS8 301 aa16.25■□□□□ 0.19
NEK3-202ENST00000550841 RABAC1Q9UI14 185 aa16.25■□□□□ 0.19
NEK3-202ENST00000550841 AGPAT2O15120 278 aa16.24■□□□□ 0.19
NEK3-202ENST00000550841 LYZP61626 148 aa16.24■□□□□ 0.19
NEK3-202ENST00000550841 CLINT1Q14677 625 aa16.24■□□□□ 0.19
NEK3-202ENST00000550841 BEAN1Q3B7T3 259 aa16.24■□□□□ 0.19
NEK3-202ENST00000550841 LAMTOR1Q6IAA8 161 aa16.24■□□□□ 0.19
NEK3-202ENST00000550841 LCN12Q6JVE5 192 aa16.24■□□□□ 0.19
NEK3-202ENST00000550841 S100A7AQ86SG5 101 aa16.24■□□□□ 0.19
NEK3-202ENST00000550841 GRAMD2BQ96HH9 432 aa16.24■□□□□ 0.19
NEK3-202ENST00000550841 ATP5SQ99766 215 aa16.24■□□□□ 0.19
NEK3-202ENST00000550841 PBDC1Q9BVG4 233 aa16.24■□□□□ 0.19
NEK3-202ENST00000550841 RHPN1-AS1Q9BWJ2 59 aa16.24■□□□□ 0.19
NEK3-202ENST00000550841 hCG_2014768A0A024R1R8 64 aa16.23■□□□□ 0.19
NEK3-202ENST00000550841 TRAV25A0A0B4J276 109 aa16.23■□□□□ 0.19
NEK3-202ENST00000550841 UBE2L5PA0A1B0GUS4 154 aa16.23■□□□□ 0.19
NEK3-202ENST00000550841 CHEK1O14757 476 aa16.23■□□□□ 0.19
NEK3-202ENST00000550841 IFNA5P01569 189 aa16.23■□□□□ 0.19
NEK3-202ENST00000550841 CAMLGP49069 296 aa16.23■□□□□ 0.19
NEK3-202ENST00000550841 PXDC1Q5TGL8 231 aa16.23■□□□□ 0.19
NEK3-202ENST00000550841 MLXQ9UH92 298 aa16.23■□□□□ 0.19
NEK3-202ENST00000550841 SLC45A2Q9UMX9 530 aa16.23■□□□□ 0.19
NEK3-202ENST00000550841 EDN2P20800 178 aa16.22■□□□□ 0.19
NEK3-202ENST00000550841 FGF7P21781 194 aa16.22■□□□□ 0.19
NEK3-202ENST00000550841 EIF2B2P49770 351 aaKnown RBP16.22■□□□□ 0.19
NEK3-202ENST00000550841 USF2Q15853 346 aaPredicted RBP16.22■□□□□ 0.19
NEK3-202ENST00000550841 CD300EQ496F6 205 aaPredicted RBP16.22■□□□□ 0.19
NEK3-202ENST00000550841 RBPMS2Q6ZRY4 209 aaKnown RBP16.22■□□□□ 0.19
NEK3-202ENST00000550841 SCGB1C1Q8TD33 95 aa16.22■□□□□ 0.19
NEK3-202ENST00000550841 MGST2Q99735 147 aa16.22■□□□□ 0.19
NEK3-202ENST00000550841 VSIRQ9H7M9 311 aa16.22■□□□□ 0.19
NEK3-202ENST00000550841 TNFSF18Q9UNG2 199 aa16.22■□□□□ 0.19
NEK3-202ENST00000550841 CMYA5Q8N3K9 4069 aa16.21■□□□□ 0.19
NEK3-202ENST00000550841 GATA2P23769 480 aaPredicted RBP16.21■□□□□ 0.19
NEK3-202ENST00000550841 AP2S1P53680 142 aaPredicted RBP16.21■□□□□ 0.19
NEK3-202ENST00000550841 PLP1P60201 277 aa16.21■□□□□ 0.19
NEK3-202ENST00000550841 ZNF709Q8N972 641 aa16.21■□□□□ 0.19
NEK3-202ENST00000550841 U3KQE9 123 aa16.21■□□□□ 0.19
NEK3-202ENST00000550841 IGHV3-49A0A0A0MS15 119 aa16.2■□□□□ 0.18
NEK3-202ENST00000550841 G3V3Q6 166 aa16.2■□□□□ 0.18
NEK3-202ENST00000550841 HYPMO75409 117 aa16.2■□□□□ 0.18
NEK3-202ENST00000550841 LINC00869P0C866 280 aa16.2■□□□□ 0.18
NEK3-202ENST00000550841 ORM2P19652 201 aa16.2■□□□□ 0.18
NEK3-202ENST00000550841 RPL29P47914 159 aaKnown RBP16.2■□□□□ 0.18
NEK3-202ENST00000550841 TMEM182Q6ZP80 229 aaPredicted RBP16.2■□□□□ 0.18
NEK3-202ENST00000550841 Q6ZRG5 221 aa16.2■□□□□ 0.18
NEK3-202ENST00000550841 PPP1R14BQ96C90 147 aa16.2■□□□□ 0.18
NEK3-202ENST00000550841 ST6GAL2Q96JF0 529 aa16.2■□□□□ 0.18
NEK3-202ENST00000550841 SMIM3Q9BZL3 60 aa16.2■□□□□ 0.18
NEK3-202ENST00000550841 WDR61Q9GZS3 305 aaKnown RBP16.2■□□□□ 0.18
NEK3-202ENST00000550841 ZNF256Q9Y2P7 627 aaPredicted RBP16.2■□□□□ 0.18
NEK3-202ENST00000550841 C17orf112F2Z3M2 114 aa16.19■□□□□ 0.18
NEK3-202ENST00000550841 SMLR1H3BR10 107 aa16.19■□□□□ 0.18
NEK3-202ENST00000550841 ZNF266Q14584 549 aa16.19■□□□□ 0.18
NEK3-202ENST00000550841 TCTE3Q8IZS6 198 aa16.19■□□□□ 0.18
NEK3-202ENST00000550841 OR1B1Q8NGR6 318 aa16.19■□□□□ 0.18
NEK3-202ENST00000550841 ST8SIA2Q92186 375 aa16.19■□□□□ 0.18
NEK3-202ENST00000550841 NEURL2Q9BR09 285 aa16.19■□□□□ 0.18
NEK3-202ENST00000550841 GGTLC1Q9BX51 225 aa16.19■□□□□ 0.18
NEK3-202ENST00000550841 PARD6GQ9BYG4 376 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms