RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 A0A1W2PRD5 423 aa14.72□□□□□ -0.05
PRPF40B-208ENST00000548436 A0A1W2PRF3 423 aa14.72□□□□□ -0.05
PRPF40B-208ENST00000548436 A0A1W2PRM7 423 aa14.72□□□□□ -0.05
PRPF40B-208ENST00000548436 NUPR1O60356 82 aa14.72□□□□□ -0.05
PRPF40B-208ENST00000548436 IGLC1P0CG04 106 aa14.72□□□□□ -0.05
PRPF40B-208ENST00000548436 PRTN3P24158 256 aa14.72□□□□□ -0.05
PRPF40B-208ENST00000548436 PLP1P60201 277 aa14.72□□□□□ -0.05
PRPF40B-208ENST00000548436 STXBP6Q8NFX7 210 aa14.72□□□□□ -0.05
PRPF40B-208ENST00000548436 ACACBO00763 2458 aa14.72□□□□□ -0.05
PRPF40B-208ENST00000548436 GRIFINA4D1Z8 144 aa14.71□□□□□ -0.05
PRPF40B-208ENST00000548436 SPINK4O60575 86 aa14.71□□□□□ -0.05
PRPF40B-208ENST00000548436 CX3CL1P78423 397 aa14.71□□□□□ -0.05
PRPF40B-208ENST00000548436 SSX2Q16385 188 aa14.71□□□□□ -0.05
PRPF40B-208ENST00000548436 LEMD1Q68G75 181 aa14.71□□□□□ -0.05
PRPF40B-208ENST00000548436 TMEM18Q96B42 140 aa14.71□□□□□ -0.05
PRPF40B-208ENST00000548436 CSMD1Q96PZ7 3565 aa14.71□□□□□ -0.05
PRPF40B-208ENST00000548436 TRAV20A0A0B4J274 112 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 NBR2O15453 112 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 PSG1P11464 419 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 GP9P14770 177 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 TCL1AP56279 114 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 OR5R1Q8NH85 324 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 SNURFLB1AK76 121 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 NBEAP1P0C6P0 100 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 CDKN1AP38936 164 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 CEACAM3P40198 252 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 SLC35B1P78383 322 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 C9orf152Q5JTZ5 239 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 NPBQ8NG41 125 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 FAM168AQ92567 244 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 SRSF8Q9BRL6 282 aaKnown RBP14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 SERTAD4Q9NUC0 356 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 TP53TG3Q9ULZ0 132 aa14.7□□□□□ -0.06
PRPF40B-208ENST00000548436 SMIM27A0A1W2PRY6 76 aa14.69□□□□□ -0.06
PRPF40B-208ENST00000548436 PGPA6NDG6 321 aa14.69□□□□□ -0.06
PRPF40B-208ENST00000548436 NDUFS7O75251 213 aa14.69□□□□□ -0.06
PRPF40B-208ENST00000548436 NDUFA3O95167 84 aa14.69□□□□□ -0.06
PRPF40B-208ENST00000548436 CA1P00915 261 aaPredicted RBP14.69□□□□□ -0.06
PRPF40B-208ENST00000548436 BAGE2Q86Y30 109 aa14.69□□□□□ -0.06
PRPF40B-208ENST00000548436 FAM103A1Q9BTL3 118 aaKnown RBP14.69□□□□□ -0.06
PRPF40B-208ENST00000548436 EPDR1Q9UM22 224 aa14.69□□□□□ -0.06
PRPF40B-208ENST00000548436 WNK2Q9Y3S1 2297 aa14.69□□□□□ -0.06
PRPF40B-208ENST00000548436 K7EIM0 57 aa14.69□□□□□ -0.06
PRPF40B-208ENST00000548436 SLC25A5P05141 298 aaKnown RBP14.69□□□□□ -0.06
PRPF40B-208ENST00000548436 GNB1LQ9BYB4 327 aa14.69□□□□□ -0.06
PRPF40B-208ENST00000548436 ZNF705GA8MUZ8 300 aaPredicted RBP14.68□□□□□ -0.06
PRPF40B-208ENST00000548436 H3BTX0 84 aa14.68□□□□□ -0.06
PRPF40B-208ENST00000548436 ZFP36P26651 326 aaKnown RBP14.68□□□□□ -0.06
PRPF40B-208ENST00000548436 LYZP61626 148 aa14.68□□□□□ -0.06
PRPF40B-208ENST00000548436 DYNAPQ8N1N2 210 aa14.68□□□□□ -0.06
PRPF40B-208ENST00000548436 HIGD1AQ9Y241 93 aa14.68□□□□□ -0.06
PRPF40B-208ENST00000548436 IGKV1-17P01599 117 aa14.67□□□□□ -0.06
PRPF40B-208ENST00000548436 HES1Q14469 280 aa14.67□□□□□ -0.06
PRPF40B-208ENST00000548436 TMEM183BQ1AE95 376 aa14.67□□□□□ -0.06
PRPF40B-208ENST00000548436 VMO1Q7Z5L0 202 aa14.67□□□□□ -0.06
PRPF40B-208ENST00000548436 SGK494Q96LW2 274 aa14.67□□□□□ -0.06
PRPF40B-208ENST00000548436 TRBV9A0A0B4J1U6 114 aa14.67□□□□□ -0.06
PRPF40B-208ENST00000548436 GPR6P46095 362 aaPredicted RBP14.67□□□□□ -0.06
PRPF40B-208ENST00000548436 LINC00310P59036 64 aa14.67□□□□□ -0.06
PRPF40B-208ENST00000548436 RASL11BQ9BPW5 248 aa14.67□□□□□ -0.06
PRPF40B-208ENST00000548436 CRISP2P16562 243 aa14.66□□□□□ -0.06
PRPF40B-208ENST00000548436 ZNF600Q6ZNG1 722 aa14.66□□□□□ -0.06
PRPF40B-208ENST00000548436 TMEM136Q6ZRR5 245 aa14.66□□□□□ -0.06
PRPF40B-208ENST00000548436 FAM231DQ6ZW35 169 aa14.66□□□□□ -0.06
PRPF40B-208ENST00000548436 PRORYQ9H606 182 aa14.66□□□□□ -0.06
PRPF40B-208ENST00000548436 RPH3ALQ9UNE2 315 aa14.66□□□□□ -0.06
PRPF40B-208ENST00000548436 ASH1LQ9NR48 2969 aaKnown RBP14.66□□□□□ -0.06
PRPF40B-208ENST00000548436 C5orf64Q2M2E5 130 aa14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 KLF17Q5JT82 389 aaPredicted RBP14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 NUDT10Q8NFP7 164 aa14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 MBD6Q96DN6 1003 aa14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 NUDT11Q96G61 164 aa14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 SLC25A39Q9BZJ4 359 aaPredicted RBP14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 PRO1933Q9H354 126 aa14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 C7orf69Q9H7B7 122 aa14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 KLF12Q9Y4X4 402 aa14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 ITPR1Q14643 2758 aa14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 UBE2G1P62253 170 aa14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 MRPL54Q6P161 138 aaKnown RBP14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 C1orf122Q6ZSJ8 110 aa14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 Q9H3A6 140 aa14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 NAT8BQ9UHF3 227 aa14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 MED13LQ71F56 2210 aa14.65□□□□□ -0.06
PRPF40B-208ENST00000548436 HOXB4P17483 251 aaPredicted RBP14.64□□□□□ -0.07
PRPF40B-208ENST00000548436 PRR27Q6MZM9 219 aa14.64□□□□□ -0.07
PRPF40B-208ENST00000548436 UBTD1Q9HAC8 227 aa14.64□□□□□ -0.07
PRPF40B-208ENST00000548436 MRPL27Q9P0M9 148 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-208ENST00000548436 IZUMO1RA6ND01 250 aa14.64□□□□□ -0.07
PRPF40B-208ENST00000548436 F2Z2F3 143 aa14.64□□□□□ -0.07
PRPF40B-208ENST00000548436 GATCO43716 136 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-208ENST00000548436 PKIAP61925 76 aa14.64□□□□□ -0.07
PRPF40B-208ENST00000548436 RPL19P84098 196 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-208ENST00000548436 WDR73Q6P4I2 378 aa14.64□□□□□ -0.07
PRPF40B-208ENST00000548436 CMTM2Q8TAZ6 248 aa14.64□□□□□ -0.07
PRPF40B-208ENST00000548436 RBM14Q96PK6 669 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-208ENST00000548436 ATG101Q9BSB4 218 aa14.64□□□□□ -0.07
PRPF40B-208ENST00000548436 A6NNC1 897 aa14.63□□□□□ -0.07
PRPF40B-208ENST00000548436 KIR3DL3Q8N743 410 aa14.63□□□□□ -0.07
PRPF40B-208ENST00000548436 C5orf17Q8NAS9 161 aa14.63□□□□□ -0.07
PRPF40B-208ENST00000548436 ZNF586Q9NXT0 402 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms