RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 NHLH2Q02577 135 aa15.7■□□□□ 0.1
SCARB1-211ENST00000546215 BTNL8Q6UX41 500 aa15.7■□□□□ 0.1
SCARB1-211ENST00000546215 OR51G1Q8NGK1 321 aa15.7■□□□□ 0.1
SCARB1-211ENST00000546215 OR2K2Q8NGT1 345 aa15.7■□□□□ 0.1
SCARB1-211ENST00000546215 SELENOKQ9Y6D0 94 aa15.7■□□□□ 0.1
SCARB1-211ENST00000546215 FABP1P07148 127 aa15.69■□□□□ 0.1
SCARB1-211ENST00000546215 RAP2BP61225 183 aa15.69■□□□□ 0.1
SCARB1-211ENST00000546215 DEFA6Q01524 100 aa15.69■□□□□ 0.1
SCARB1-211ENST00000546215 Q5BKY6 102 aa15.69■□□□□ 0.1
SCARB1-211ENST00000546215 CHAC2Q8WUX2 184 aa15.69■□□□□ 0.1
SCARB1-211ENST00000546215 ZNF256Q9Y2P7 627 aaPredicted RBP15.69■□□□□ 0.1
SCARB1-211ENST00000546215 LSM4Q9Y4Z0 139 aaKnown RBP15.69■□□□□ 0.1
SCARB1-211ENST00000546215 IGHV3-49A0A0A0MS15 119 aa15.68■□□□□ 0.1
SCARB1-211ENST00000546215 WI2-2373I1.2A0A1W2PRP0 233 aa15.68■□□□□ 0.1
SCARB1-211ENST00000546215 CHEK1O14757 476 aa15.68■□□□□ 0.1
SCARB1-211ENST00000546215 APOHP02749 345 aaPredicted RBP15.68■□□□□ 0.1
SCARB1-211ENST00000546215 NPPCP23582 126 aa15.68■□□□□ 0.1
SCARB1-211ENST00000546215 CRYBB3P26998 211 aa15.68■□□□□ 0.1
SCARB1-211ENST00000546215 OR2F1Q13607 317 aa15.68■□□□□ 0.1
SCARB1-211ENST00000546215 USF2Q15853 346 aaPredicted RBP15.68■□□□□ 0.1
SCARB1-211ENST00000546215 VWC2Q2TAL6 325 aa15.68■□□□□ 0.1
SCARB1-211ENST00000546215 TEPPQ6URK8 271 aa15.68■□□□□ 0.1
SCARB1-211ENST00000546215 Q6ZNX1 250 aa15.68■□□□□ 0.1
SCARB1-211ENST00000546215 TMEM182Q6ZP80 229 aaPredicted RBP15.68■□□□□ 0.1
SCARB1-211ENST00000546215 THAP6Q8TBB0 222 aa15.68■□□□□ 0.1
SCARB1-211ENST00000546215 METTL26Q96S19 204 aa15.68■□□□□ 0.1
SCARB1-211ENST00000546215 RHPN1-AS1Q9BWJ2 59 aa15.68■□□□□ 0.1
SCARB1-211ENST00000546215 AURKAIP1Q9NWT8 199 aaPredicted RBP15.68■□□□□ 0.1
SCARB1-211ENST00000546215 BAXQ07812 192 aa15.67■□□□□ 0.1
SCARB1-211ENST00000546215 LCN12Q6JVE5 192 aa15.67■□□□□ 0.1
SCARB1-211ENST00000546215 LILRB2Q8N423 598 aa15.67■□□□□ 0.1
SCARB1-211ENST00000546215 RNF125Q96EQ8 232 aa15.67■□□□□ 0.1
SCARB1-211ENST00000546215 UQCC1Q9NVA1 299 aa15.67■□□□□ 0.1
SCARB1-211ENST00000546215 IGHV3OR16-13A0A075B7E8 117 aa15.66■□□□□ 0.1
SCARB1-211ENST00000546215 IGHV3-74A0A0B4J1X5 117 aa15.66■□□□□ 0.1
SCARB1-211ENST00000546215 GATA2P23769 480 aaPredicted RBP15.66■□□□□ 0.1
SCARB1-211ENST00000546215 FGL1Q08830 312 aa15.66■□□□□ 0.1
SCARB1-211ENST00000546215 ATP6V1FQ16864 119 aa15.66■□□□□ 0.1
SCARB1-211ENST00000546215 CYP2G1PQ6ZSU1 146 aa15.66■□□□□ 0.1
SCARB1-211ENST00000546215 OR5C1Q8NGR4 320 aa15.66■□□□□ 0.1
SCARB1-211ENST00000546215 TMEM147Q9BVK8 224 aa15.66■□□□□ 0.1
SCARB1-211ENST00000546215 VSIRQ9H7M9 311 aa15.66■□□□□ 0.1
SCARB1-211ENST00000546215 U3KQE9 123 aa15.66■□□□□ 0.1
SCARB1-211ENST00000546215 GP9P14770 177 aa15.66■□□□□ 0.1
SCARB1-211ENST00000546215 RPL12P30050 165 aaKnown RBP15.66■□□□□ 0.1
SCARB1-211ENST00000546215 TMEM61Q8N0U2 210 aa15.66■□□□□ 0.1
SCARB1-211ENST00000546215 ST8SIA2Q92186 375 aa15.66■□□□□ 0.1
SCARB1-211ENST00000546215 PRR25Q96S07 402 aa15.66■□□□□ 0.1
SCARB1-211ENST00000546215 RNF2Q99496 336 aa15.66■□□□□ 0.1
SCARB1-211ENST00000546215 ZNF785A8K8V0 405 aa15.65■□□□□ 0.1
SCARB1-211ENST00000546215 CFDP00746 253 aaPredicted RBP15.65■□□□□ 0.1
SCARB1-211ENST00000546215 HNRNPCP07910 306 aaKnown RBP eCLIP15.65■□□□□ 0.1
SCARB1-211ENST00000546215 OR2T35Q8NGX2 323 aa15.65■□□□□ 0.1
SCARB1-211ENST00000546215 WDR83OSQ9Y284 106 aa15.65■□□□□ 0.1
SCARB1-211ENST00000546215 IGHV3-66A0A0C4DH42 116 aa15.64■□□□□ 0.09
SCARB1-211ENST00000546215 LYZP61626 148 aa15.64■□□□□ 0.09
SCARB1-211ENST00000546215 SELENOTP62341 195 aa15.64■□□□□ 0.09
SCARB1-211ENST00000546215 BPIFCQ8NFQ6 507 aa15.64■□□□□ 0.09
SCARB1-211ENST00000546215 MGST2Q99735 147 aa15.64■□□□□ 0.09
SCARB1-211ENST00000546215 PBDC1Q9BVG4 233 aa15.64■□□□□ 0.09
SCARB1-211ENST00000546215 RABAC1Q9UI14 185 aa15.64■□□□□ 0.09
SCARB1-211ENST00000546215 HSPB11Q9Y547 144 aa15.64■□□□□ 0.09
SCARB1-211ENST00000546215 TRAV25A0A0B4J276 109 aa15.63■□□□□ 0.09
SCARB1-211ENST00000546215 G3V3Q6 166 aa15.63■□□□□ 0.09
SCARB1-211ENST00000546215 AGPAT2O15120 278 aa15.63■□□□□ 0.09
SCARB1-211ENST00000546215 PRKDCP78527 4128 aaKnown RBP15.63■□□□□ 0.09
SCARB1-211ENST00000546215 UBE2L5PA0A1B0GUS4 154 aa15.62■□□□□ 0.09
SCARB1-211ENST00000546215 A0A1W2PS18 150 aa15.62■□□□□ 0.09
SCARB1-211ENST00000546215 BMI1P35226 326 aa15.62■□□□□ 0.09
SCARB1-211ENST00000546215 FAM90A2PQ658T7 463 aa15.62■□□□□ 0.09
SCARB1-211ENST00000546215 RBPMS2Q6ZRY4 209 aaKnown RBP15.62■□□□□ 0.09
SCARB1-211ENST00000546215 SLC45A2Q9UMX9 530 aa15.62■□□□□ 0.09
SCARB1-211ENST00000546215 K7EIL1 84 aa15.62■□□□□ 0.09
SCARB1-211ENST00000546215 EIF2B2P49770 351 aaKnown RBP15.62■□□□□ 0.09
SCARB1-211ENST00000546215 CLINT1Q14677 625 aa15.62■□□□□ 0.09
SCARB1-211ENST00000546215 LAMTOR1Q6IAA8 161 aa15.62■□□□□ 0.09
SCARB1-211ENST00000546215 STPG3Q8N7X2 389 aa15.62■□□□□ 0.09
SCARB1-211ENST00000546215 NARS2Q96I59 477 aaKnown RBP15.62■□□□□ 0.09
SCARB1-211ENST00000546215 TMEM231Q9H6L2 316 aa15.62■□□□□ 0.09
SCARB1-211ENST00000546215 TSPAN4O14817 238 aa15.61■□□□□ 0.09
SCARB1-211ENST00000546215 BUB3O43684 328 aa15.61■□□□□ 0.09
SCARB1-211ENST00000546215 DFFBO76075 338 aa15.61■□□□□ 0.09
SCARB1-211ENST00000546215 CAMLGP49069 296 aa15.61■□□□□ 0.09
SCARB1-211ENST00000546215 GUCA2BQ16661 112 aa15.61■□□□□ 0.09
SCARB1-211ENST00000546215 ZNF546Q86UE3 836 aa15.61■□□□□ 0.09
SCARB1-211ENST00000546215 LINC00869P0C866 280 aa15.6■□□□□ 0.09
SCARB1-211ENST00000546215 ORM2P19652 201 aa15.6■□□□□ 0.09
SCARB1-211ENST00000546215 PLP1P60201 277 aa15.6■□□□□ 0.09
SCARB1-211ENST00000546215 RAB31Q13636 194 aa15.6■□□□□ 0.09
SCARB1-211ENST00000546215 TCF24Q7RTU0 167 aa15.6■□□□□ 0.09
SCARB1-211ENST00000546215 AQP10Q96PS8 301 aa15.6■□□□□ 0.09
SCARB1-211ENST00000546215 GGTLC1Q9BX51 225 aa15.6■□□□□ 0.09
SCARB1-211ENST00000546215 CD5P06127 495 aa15.59■□□□□ 0.09
SCARB1-211ENST00000546215 FGF7P21781 194 aa15.59■□□□□ 0.09
SCARB1-211ENST00000546215 C16orf54Q6UWD8 224 aa15.59■□□□□ 0.09
SCARB1-211ENST00000546215 ATP5SQ99766 215 aa15.59■□□□□ 0.09
SCARB1-211ENST00000546215 Q8N1Y9 231 aa15.58■□□□□ 0.09
SCARB1-211ENST00000546215 OR1B1Q8NGR6 318 aa15.58■□□□□ 0.09
SCARB1-211ENST00000546215 GLMPQ8WWB7 406 aa15.58■□□□□ 0.09
SCARB1-211ENST00000546215 GRAMD2BQ96HH9 432 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms