RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 WI2-2373I1.2A0A1W2PRP0 233 aa15.45■□□□□ 0.06
HMGA2-211ENST00000545998 CHEK1O14757 476 aa15.45■□□□□ 0.06
HMGA2-211ENST00000545998 IL4P05112 153 aa15.45■□□□□ 0.06
HMGA2-211ENST00000545998 FABP1P07148 127 aa15.45■□□□□ 0.06
HMGA2-211ENST00000545998 GIPP09681 153 aaPredicted RBP15.45■□□□□ 0.06
HMGA2-211ENST00000545998 OR51G1Q8NGK1 321 aa15.45■□□□□ 0.06
HMGA2-211ENST00000545998 PRR25Q96S07 402 aa15.45■□□□□ 0.06
HMGA2-211ENST00000545998 SLC25A31Q9H0C2 315 aa15.45■□□□□ 0.06
HMGA2-211ENST00000545998 IGHV3-49A0A0A0MS15 119 aa15.44■□□□□ 0.06
HMGA2-211ENST00000545998 APOHP02749 345 aaPredicted RBP15.44■□□□□ 0.06
HMGA2-211ENST00000545998 LYL1P12980 280 aa15.44■□□□□ 0.06
HMGA2-211ENST00000545998 GP9P14770 177 aa15.44■□□□□ 0.06
HMGA2-211ENST00000545998 CRYBB3P26998 211 aa15.44■□□□□ 0.06
HMGA2-211ENST00000545998 S100A11P31949 105 aa15.44■□□□□ 0.06
HMGA2-211ENST00000545998 HBG1P69891 147 aa15.44■□□□□ 0.06
HMGA2-211ENST00000545998 HBG2P69892 147 aa15.44■□□□□ 0.06
HMGA2-211ENST00000545998 USF2Q15853 346 aaPredicted RBP15.44■□□□□ 0.06
HMGA2-211ENST00000545998 METTL26Q96S19 204 aa15.44■□□□□ 0.06
HMGA2-211ENST00000545998 RHPN1-AS1Q9BWJ2 59 aa15.44■□□□□ 0.06
HMGA2-211ENST00000545998 MBD2Q9UBB5 411 aa15.44■□□□□ 0.06
HMGA2-211ENST00000545998 NPPCP23582 126 aa15.43■□□□□ 0.06
HMGA2-211ENST00000545998 EWSR1Q01844 656 aaKnown RBP eCLIP15.43■□□□□ 0.06
HMGA2-211ENST00000545998 NHLH2Q02577 135 aa15.43■□□□□ 0.06
HMGA2-211ENST00000545998 TEPPQ6URK8 271 aa15.43■□□□□ 0.06
HMGA2-211ENST00000545998 TMEM61Q8N0U2 210 aa15.43■□□□□ 0.06
HMGA2-211ENST00000545998 RNF125Q96EQ8 232 aa15.43■□□□□ 0.06
HMGA2-211ENST00000545998 VSIRQ9H7M9 311 aa15.43■□□□□ 0.06
HMGA2-211ENST00000545998 LSM4Q9Y4Z0 139 aaKnown RBP15.43■□□□□ 0.06
HMGA2-211ENST00000545998 ZNF785A8K8V0 405 aa15.42■□□□□ 0.06
HMGA2-211ENST00000545998 OR2F1Q13607 317 aa15.42■□□□□ 0.06
HMGA2-211ENST00000545998 VWC2Q2TAL6 325 aa15.42■□□□□ 0.06
HMGA2-211ENST00000545998 LILRB2Q8N423 598 aa15.42■□□□□ 0.06
HMGA2-211ENST00000545998 ST8SIA2Q92186 375 aa15.42■□□□□ 0.06
HMGA2-211ENST00000545998 RNF2Q99496 336 aa15.42■□□□□ 0.06
HMGA2-211ENST00000545998 IGHV3OR16-13A0A075B7E8 117 aa15.41■□□□□ 0.06
HMGA2-211ENST00000545998 IGHV3-74A0A0B4J1X5 117 aa15.41■□□□□ 0.06
HMGA2-211ENST00000545998 RAP2BP61225 183 aa15.41■□□□□ 0.06
HMGA2-211ENST00000545998 BAXQ07812 192 aa15.41■□□□□ 0.06
HMGA2-211ENST00000545998 TMEM182Q6ZP80 229 aaPredicted RBP15.41■□□□□ 0.06
HMGA2-211ENST00000545998 UQCC1Q9NVA1 299 aa15.41■□□□□ 0.06
HMGA2-211ENST00000545998 U3KQE9 123 aa15.41■□□□□ 0.06
HMGA2-211ENST00000545998 TRAV25A0A0B4J276 109 aa15.41■□□□□ 0.06
HMGA2-211ENST00000545998 K7EIL1 84 aa15.41■□□□□ 0.06
HMGA2-211ENST00000545998 CFDP00746 253 aaPredicted RBP15.41■□□□□ 0.06
HMGA2-211ENST00000545998 HNRNPCP07910 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
HMGA2-211ENST00000545998 ATP6V1FQ16864 119 aa15.41■□□□□ 0.06
HMGA2-211ENST00000545998 CYP2G1PQ6ZSU1 146 aa15.41■□□□□ 0.06
HMGA2-211ENST00000545998 THAP6Q8TBB0 222 aa15.41■□□□□ 0.06
HMGA2-211ENST00000545998 TMEM147Q9BVK8 224 aa15.41■□□□□ 0.06
HMGA2-211ENST00000545998 IGHV3-66A0A0C4DH42 116 aa15.4■□□□□ 0.06
HMGA2-211ENST00000545998 GATA2P23769 480 aaPredicted RBP15.4■□□□□ 0.06
HMGA2-211ENST00000545998 BMI1P35226 326 aa15.4■□□□□ 0.06
HMGA2-211ENST00000545998 LYZP61626 148 aa15.4■□□□□ 0.06
HMGA2-211ENST00000545998 FGL1Q08830 312 aa15.4■□□□□ 0.06
HMGA2-211ENST00000545998 Q5BKY6 102 aa15.4■□□□□ 0.06
HMGA2-211ENST00000545998 RBPMS2Q6ZRY4 209 aaKnown RBP15.4■□□□□ 0.06
HMGA2-211ENST00000545998 BPIFCQ8NFQ6 507 aa15.4■□□□□ 0.06
HMGA2-211ENST00000545998 CHAC2Q8WUX2 184 aa15.4■□□□□ 0.06
HMGA2-211ENST00000545998 PBDC1Q9BVG4 233 aa15.4■□□□□ 0.06
HMGA2-211ENST00000545998 RABAC1Q9UI14 185 aa15.4■□□□□ 0.06
HMGA2-211ENST00000545998 A0A1W2PS18 150 aa15.39■□□□□ 0.05
HMGA2-211ENST00000545998 RPL12P30050 165 aaKnown RBP15.39■□□□□ 0.05
HMGA2-211ENST00000545998 SELENOTP62341 195 aa15.39■□□□□ 0.05
HMGA2-211ENST00000545998 FAM90A2PQ658T7 463 aa15.39■□□□□ 0.05
HMGA2-211ENST00000545998 LAMTOR1Q6IAA8 161 aa15.39■□□□□ 0.05
HMGA2-211ENST00000545998 OR5C1Q8NGR4 320 aa15.39■□□□□ 0.05
HMGA2-211ENST00000545998 WDR83OSQ9Y284 106 aa15.39■□□□□ 0.05
HMGA2-211ENST00000545998 TSPAN4O14817 238 aa15.38■□□□□ 0.05
HMGA2-211ENST00000545998 EIF2B2P49770 351 aaKnown RBP15.38■□□□□ 0.05
HMGA2-211ENST00000545998 GUCA2BQ16661 112 aa15.38■□□□□ 0.05
HMGA2-211ENST00000545998 Q6ZNX1 250 aa15.38■□□□□ 0.05
HMGA2-211ENST00000545998 NARS2Q96I59 477 aaKnown RBP15.38■□□□□ 0.05
HMGA2-211ENST00000545998 MGST2Q99735 147 aa15.38■□□□□ 0.05
HMGA2-211ENST00000545998 TMEM231Q9H6L2 316 aa15.38■□□□□ 0.05
HMGA2-211ENST00000545998 HSPB11Q9Y547 144 aa15.38■□□□□ 0.05
HMGA2-211ENST00000545998 UBE2L5PA0A1B0GUS4 154 aa15.37■□□□□ 0.05
HMGA2-211ENST00000545998 AGPAT2O15120 278 aa15.37■□□□□ 0.05
HMGA2-211ENST00000545998 DFFBO76075 338 aa15.36■□□□□ 0.05
HMGA2-211ENST00000545998 STPG3Q8N7X2 389 aa15.36■□□□□ 0.05
HMGA2-211ENST00000545998 OR2T35Q8NGX2 323 aa15.36■□□□□ 0.05
HMGA2-211ENST00000545998 SLC45A2Q9UMX9 530 aa15.36■□□□□ 0.05
HMGA2-211ENST00000545998 BUB3O43684 328 aa15.36■□□□□ 0.05
HMGA2-211ENST00000545998 CD5P06127 495 aa15.36■□□□□ 0.05
HMGA2-211ENST00000545998 CLINT1Q14677 625 aa15.36■□□□□ 0.05
HMGA2-211ENST00000545998 C16orf54Q6UWD8 224 aa15.36■□□□□ 0.05
HMGA2-211ENST00000545998 TCF24Q7RTU0 167 aa15.36■□□□□ 0.05
HMGA2-211ENST00000545998 ZNF546Q86UE3 836 aa15.36■□□□□ 0.05
HMGA2-211ENST00000545998 Q8N1Y9 231 aa15.36■□□□□ 0.05
HMGA2-211ENST00000545998 MRAPQ8TCY5 172 aa15.36■□□□□ 0.05
HMGA2-211ENST00000545998 SPAG8Q99932 426 aaPredicted RBP15.36■□□□□ 0.05
HMGA2-211ENST00000545998 G3V3Q6 166 aa15.35■□□□□ 0.05
HMGA2-211ENST00000545998 LINC00869P0C866 280 aa15.35■□□□□ 0.05
HMGA2-211ENST00000545998 ORM2P19652 201 aa15.35■□□□□ 0.05
HMGA2-211ENST00000545998 CAMLGP49069 296 aa15.35■□□□□ 0.05
HMGA2-211ENST00000545998 PLP1P60201 277 aa15.35■□□□□ 0.05
HMGA2-211ENST00000545998 RAB31Q13636 194 aa15.35■□□□□ 0.05
HMGA2-211ENST00000545998 GTSCR1Q86UQ5 136 aa15.35■□□□□ 0.05
HMGA2-211ENST00000545998 GLMPQ8WWB7 406 aa15.35■□□□□ 0.05
HMGA2-211ENST00000545998 GRAMD2BQ96HH9 432 aa15.35■□□□□ 0.05
HMGA2-211ENST00000545998 OR1B1Q8NGR6 318 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms