RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 YIF1AO95070 293 aa8.24□□□□□ -1.09
DDB1-221ENST00000543162 TRBV12-3P01733 135 aa8.24□□□□□ -1.09
DDB1-221ENST00000543162 CD28P10747 220 aa8.24□□□□□ -1.09
DDB1-221ENST00000543162 M6PRP20645 277 aa8.24□□□□□ -1.09
DDB1-221ENST00000543162 CDX1P47902 265 aaPredicted RBP8.24□□□□□ -1.09
DDB1-221ENST00000543162 SULT1A2P50226 295 aa8.24□□□□□ -1.09
DDB1-221ENST00000543162 RAB5CP51148 216 aa8.24□□□□□ -1.09
DDB1-221ENST00000543162 RAB2AP61019 212 aa8.24□□□□□ -1.09
DDB1-221ENST00000543162 RELQ04864 619 aaPredicted RBP8.24□□□□□ -1.09
DDB1-221ENST00000543162 TMEM41BQ5BJD5 291 aa8.24□□□□□ -1.09
DDB1-221ENST00000543162 ZNF600Q6ZNG1 722 aa8.24□□□□□ -1.09
DDB1-221ENST00000543162 OR51G1Q8NGK1 321 aa8.24□□□□□ -1.09
DDB1-221ENST00000543162 RNF141Q8WVD5 230 aa8.24□□□□□ -1.09
DDB1-221ENST00000543162 WFDC12Q8WWY7 111 aa8.24□□□□□ -1.09
DDB1-221ENST00000543162 PLA2G2EQ9NZK7 142 aa8.24□□□□□ -1.09
DDB1-221ENST00000543162 IGHV3-35A0A0C4DH35 117 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 ZNF705EA8MWA4 302 aaPredicted RBP8.23□□□□□ -1.09
DDB1-221ENST00000543162 NUDT19A8MXV4 375 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 BMPR1BO00238 502 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 RGS13O14921 159 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 COX7A2P2O60397 106 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 GGCTO75223 188 aaKnown RBP8.23□□□□□ -1.09
DDB1-221ENST00000543162 ORM2P19652 201 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 LYZP61626 148 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 GCSAMLQ5JQS6 135 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 PXDC1Q5TGL8 231 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 DPPA3Q6W0C5 159 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 KLHL30-AS1Q8NEE0 82 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 OR10G4Q8NGN3 311 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 OR10G9Q8NGN4 311 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 OR10G7Q8NGN6 311 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 OR1L4Q8NGR5 311 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 FAM213BQ8TBF2 198 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 C4orf3Q8WVX3 66 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 PFDN5Q99471 154 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 CITED2Q99967 270 aaPredicted RBP8.23□□□□□ -1.09
DDB1-221ENST00000543162 PBDC1Q9BVG4 233 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 VSIRQ9H7M9 311 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 RPRMQ9NS64 109 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 DOK5Q9P104 306 aa8.23□□□□□ -1.09
DDB1-221ENST00000543162 TSSC4Q9Y5U2 329 aaPredicted RBP8.23□□□□□ -1.09
DDB1-221ENST00000543162 PUS1Q9Y606 427 aaKnown RBP eCLIP8.23□□□□□ -1.09
DDB1-221ENST00000543162 ELOA3CA0A087WX78 387 aaPredicted RBP8.22□□□□□ -1.09
DDB1-221ENST00000543162 WI2-2373I1.2A0A1W2PRP0 233 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 I3L521 148 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 HYPMO75409 117 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 OR2C1O95371 312 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 HSPB1P04792 205 aaKnown RBP8.22□□□□□ -1.09
DDB1-221ENST00000543162 IL4P05112 153 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 OR5G3P0C626 314 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 PLP1P60201 277 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 RAB14P61106 215 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 FAM122CQ6P4D5 195 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 C18orf65Q6ZTR6 163 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 PRIMA1Q86XR5 153 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 OR1B1Q8NGR6 318 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 LRRC20Q8TCA0 184 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 GATAD1Q8WUU5 269 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 RNF125Q96EQ8 232 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 C19orf24Q9BVV8 132 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 DNAJC4Q9NNZ3 241 aa8.22□□□□□ -1.09
DDB1-221ENST00000543162 IGHV4OR15-8A0A075B7B6 117 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 A0A087WW49 117 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 A0A1W2PPV4 95 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 A0A1W2PRX2 142 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 NDUFA4O00483 81 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 FHITP49789 147 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 RHOBP62745 196 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 BLOC1S1P78537 153 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 RPEL1Q2QD12 228 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 KRTAP24-1Q3LI83 254 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 AWAT1Q58HT5 328 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 C10orf113Q5VZT2 155 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 HIST2H2BDQ6DRA6 164 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 TOMM20LQ6UXN7 152 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 PATE2Q6UY27 113 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 RPP25LQ8N5L8 163 aaKnown RBP8.21□□□□□ -1.1
DDB1-221ENST00000543162 TMEM37Q8WXS4 190 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 DPF1Q92782 380 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 SAT2Q96F10 170 aaPredicted RBP8.21□□□□□ -1.1
DDB1-221ENST00000543162 RCC1LQ96I51 464 aaKnown RBP8.21□□□□□ -1.1
DDB1-221ENST00000543162 RNF2Q99496 336 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 ACTR3CQ9C0K3 210 aaPredicted RBP8.21□□□□□ -1.1
DDB1-221ENST00000543162 HIGD1AQ9Y241 93 aa8.21□□□□□ -1.1
DDB1-221ENST00000543162 CUBNO60494 3623 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 IGHV3OR16-8A0A075B7F1 116 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 ZNF320A2RRD8 509 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 SEC14L6B5MCN3 397 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 ZP3P21754 424 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 CDC34P49427 236 aaPredicted RBP8.2□□□□□ -1.1
DDB1-221ENST00000543162 KRTAP10-3P60369 221 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 USF2Q15853 346 aaPredicted RBP8.2□□□□□ -1.1
DDB1-221ENST00000543162 DEFB136Q30KP8 78 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 FAM106AQ4KMX7 169 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 FAM78BQ5VT40 261 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 C8orf86Q6ZUL3 223 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 S100A7AQ86SG5 101 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 OR1N2Q8NGR9 330 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 PCNPQ8WW12 178 aaKnown RBP8.2□□□□□ -1.1
DDB1-221ENST00000543162 RAB24Q969Q5 203 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms