RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ZNF709Q8N972 641 aa17.69■□□□□ 0.42
HOMER3-205ENST00000542541 BPIFCQ8NFQ6 507 aa17.69■□□□□ 0.42
HOMER3-205ENST00000542541 DLX4Q92988 240 aaPredicted RBP17.69■□□□□ 0.42
HOMER3-205ENST00000542541 MGST2Q99735 147 aa17.69■□□□□ 0.42
HOMER3-205ENST00000542541 JTBO76095 146 aa17.69■□□□□ 0.42
HOMER3-205ENST00000542541 LGALSLQ3ZCW2 172 aaPredicted RBP17.69■□□□□ 0.42
HOMER3-205ENST00000542541 TOMM20LQ6UXN7 152 aa17.69■□□□□ 0.42
HOMER3-205ENST00000542541 TMUB2Q71RG4 321 aa17.69■□□□□ 0.42
HOMER3-205ENST00000542541 REC114Q7Z4M0 266 aa17.69■□□□□ 0.42
HOMER3-205ENST00000542541 C17orf112F2Z3M2 114 aa17.68■□□□□ 0.42
HOMER3-205ENST00000542541 TSPAN15O95858 294 aa17.68■□□□□ 0.42
HOMER3-205ENST00000542541 TMEM190Q8WZ59 177 aa17.68■□□□□ 0.42
HOMER3-205ENST00000542541 GINS3Q9BRX5 216 aa17.68■□□□□ 0.42
HOMER3-205ENST00000542541 C20orf24Q9BUV8 137 aa17.68■□□□□ 0.42
HOMER3-205ENST00000542541 NPCDR1Q9BY65 106 aa17.68■□□□□ 0.42
HOMER3-205ENST00000542541 KCNIP2Q9NS61 270 aa17.68■□□□□ 0.42
HOMER3-205ENST00000542541 PEMTQ9UBM1 199 aa17.68■□□□□ 0.42
HOMER3-205ENST00000542541 SLC45A2Q9UMX9 530 aa17.68■□□□□ 0.42
HOMER3-205ENST00000542541 UFC1Q9Y3C8 167 aa17.68■□□□□ 0.42
HOMER3-205ENST00000542541 OVOL1O14753 267 aa17.67■□□□□ 0.42
HOMER3-205ENST00000542541 LINC00482Q8N8I6 264 aa17.67■□□□□ 0.42
HOMER3-205ENST00000542541 IL4P05112 153 aa17.66■□□□□ 0.42
HOMER3-205ENST00000542541 C4BPBP20851 252 aa17.66■□□□□ 0.42
HOMER3-205ENST00000542541 RPL29P47914 159 aaKnown RBP17.66■□□□□ 0.42
HOMER3-205ENST00000542541 ELLP55199 621 aaPredicted RBP17.66■□□□□ 0.42
HOMER3-205ENST00000542541 UNQ9165/PRO28630Q6UXU0 137 aa17.66■□□□□ 0.42
HOMER3-205ENST00000542541 RCC1LQ96I51 464 aaKnown RBP17.66■□□□□ 0.42
HOMER3-205ENST00000542541 GGTLC1Q9BX51 225 aa17.66■□□□□ 0.42
HOMER3-205ENST00000542541 K7EMT4 169 aa17.65■□□□□ 0.42
HOMER3-205ENST00000542541 BCL2L11O43521 198 aa17.65■□□□□ 0.42
HOMER3-205ENST00000542541 OPCMLQ14982 345 aa17.65■□□□□ 0.42
HOMER3-205ENST00000542541 RPL7L1Q6DKI1 246 aaKnown RBP17.65■□□□□ 0.42
HOMER3-205ENST00000542541 OR9G4Q8NGQ1 327 aa17.65■□□□□ 0.42
HOMER3-205ENST00000542541 RNF125Q96EQ8 232 aa17.65■□□□□ 0.42
HOMER3-205ENST00000542541 ZNF414Q96IQ9 312 aa17.65■□□□□ 0.42
HOMER3-205ENST00000542541 ZFAND3Q9H8U3 227 aa17.65■□□□□ 0.42
HOMER3-205ENST00000542541 DAZ1Q9NQZ3 744 aaKnown RBP17.65■□□□□ 0.42
HOMER3-205ENST00000542541 A8MWP6 167 aa17.65■□□□□ 0.42
HOMER3-205ENST00000542541 LINC00869P0C866 280 aa17.65■□□□□ 0.42
HOMER3-205ENST00000542541 GATA2P23769 480 aaPredicted RBP17.65■□□□□ 0.42
HOMER3-205ENST00000542541 Q6ZRG5 221 aa17.65■□□□□ 0.42
HOMER3-205ENST00000542541 C9orf62Q8N4C0 152 aa17.65■□□□□ 0.42
HOMER3-205ENST00000542541 WI2-2373I1.2A0A1W2PRP0 233 aa17.64■□□□□ 0.41
HOMER3-205ENST00000542541 EIF5AP63241 154 aaKnown RBP17.64■□□□□ 0.41
HOMER3-205ENST00000542541 PXDC1Q5TGL8 231 aa17.64■□□□□ 0.41
HOMER3-205ENST00000542541 TMEM182Q6ZP80 229 aaPredicted RBP17.64■□□□□ 0.41
HOMER3-205ENST00000542541 ELOVL1Q9BW60 279 aa17.64■□□□□ 0.41
HOMER3-205ENST00000542541 CYTL1Q9NRR1 136 aa17.64■□□□□ 0.41
HOMER3-205ENST00000542541 IGHV3OR16-8A0A075B7F1 116 aa17.63■□□□□ 0.41
HOMER3-205ENST00000542541 LYZP61626 148 aa17.63■□□□□ 0.41
HOMER3-205ENST00000542541 PRR20EP86478 221 aa17.63■□□□□ 0.41
HOMER3-205ENST00000542541 PRR20CP86479 221 aa17.63■□□□□ 0.41
HOMER3-205ENST00000542541 PRR20DP86480 221 aa17.63■□□□□ 0.41
HOMER3-205ENST00000542541 PRR20BP86481 221 aa17.63■□□□□ 0.41
HOMER3-205ENST00000542541 PRR20AP86496 221 aa17.63■□□□□ 0.41
HOMER3-205ENST00000542541 STPG3Q8N7X2 389 aa17.63■□□□□ 0.41
HOMER3-205ENST00000542541 HSD17B11Q8NBQ5 300 aa17.63■□□□□ 0.41
HOMER3-205ENST00000542541 GNPNAT1Q96EK6 184 aaPredicted RBP17.63■□□□□ 0.41
HOMER3-205ENST00000542541 METTL26Q96S19 204 aa17.63■□□□□ 0.41
HOMER3-205ENST00000542541 PBDC1Q9BVG4 233 aa17.63■□□□□ 0.41
HOMER3-205ENST00000542541 ZNF471Q9BX82 626 aaPredicted RBP17.63■□□□□ 0.41
HOMER3-205ENST00000542541 PFDN2Q9UHV9 154 aa17.63■□□□□ 0.41
HOMER3-205ENST00000542541 TIMM9Q9Y5J7 89 aa17.63■□□□□ 0.41
HOMER3-205ENST00000542541 PXMP4Q9Y6I8 212 aa17.63■□□□□ 0.41
HOMER3-205ENST00000542541 WNK1Q9H4A3 2382 aa17.62■□□□□ 0.41
HOMER3-205ENST00000542541 NPPCP23582 126 aa17.62■□□□□ 0.41
HOMER3-205ENST00000542541 S100A7P31151 101 aa17.62■□□□□ 0.41
HOMER3-205ENST00000542541 PLP1P60201 277 aa17.62■□□□□ 0.41
HOMER3-205ENST00000542541 B2MP61769 119 aa17.62■□□□□ 0.41
HOMER3-205ENST00000542541 MIC13Q5XKP0 118 aa17.62■□□□□ 0.41
HOMER3-205ENST00000542541 WFDC9Q8NEX5 89 aa17.62■□□□□ 0.41
HOMER3-205ENST00000542541 RSG1Q9BU20 258 aa17.62■□□□□ 0.41
HOMER3-205ENST00000542541 SLC39A9Q9NUM3 307 aa17.62■□□□□ 0.41
HOMER3-205ENST00000542541 CD33P20138 364 aa17.61■□□□□ 0.41
HOMER3-205ENST00000542541 NKX2-5P52952 324 aaPredicted RBP17.61■□□□□ 0.41
HOMER3-205ENST00000542541 TM4SF20Q53R12 229 aa17.61■□□□□ 0.41
HOMER3-205ENST00000542541 S100A7AQ86SG5 101 aa17.61■□□□□ 0.41
HOMER3-205ENST00000542541 MARC2Q969Z3 335 aa17.61■□□□□ 0.41
HOMER3-205ENST00000542541 PPP1R14BQ96C90 147 aa17.61■□□□□ 0.41
HOMER3-205ENST00000542541 RABAC1Q9UI14 185 aa17.61■□□□□ 0.41
HOMER3-205ENST00000542541 HYPMO75409 117 aa17.61■□□□□ 0.41
HOMER3-205ENST00000542541 ORM2P19652 201 aa17.61■□□□□ 0.41
HOMER3-205ENST00000542541 USF2Q15853 346 aaPredicted RBP17.61■□□□□ 0.41
HOMER3-205ENST00000542541 LAMTOR1Q6IAA8 161 aa17.61■□□□□ 0.41
HOMER3-205ENST00000542541 NARS2Q96I59 477 aaKnown RBP17.61■□□□□ 0.41
HOMER3-205ENST00000542541 MCRIP2Q9BUT9 160 aaKnown RBP17.61■□□□□ 0.41
HOMER3-205ENST00000542541 MRPL27Q9P0M9 148 aaKnown RBP17.61■□□□□ 0.41
HOMER3-205ENST00000542541 ZNF207O43670 478 aaKnown RBP17.6■□□□□ 0.41
HOMER3-205ENST00000542541 HNRNPCP07910 306 aaKnown RBP eCLIP17.6■□□□□ 0.41
HOMER3-205ENST00000542541 OR1B1Q8NGR6 318 aa17.6■□□□□ 0.41
HOMER3-205ENST00000542541 PSMG3Q9BT73 122 aaPredicted RBP17.6■□□□□ 0.41
HOMER3-205ENST00000542541 ELOA3CA0A087WX78 387 aaPredicted RBP17.59■□□□□ 0.41
HOMER3-205ENST00000542541 TMEM213A2RRL7 107 aa17.59■□□□□ 0.41
HOMER3-205ENST00000542541 C2orf70A6NJV1 201 aa17.59■□□□□ 0.41
HOMER3-205ENST00000542541 CRYBB3P26998 211 aa17.59■□□□□ 0.41
HOMER3-205ENST00000542541 ATP6V0CP27449 155 aa17.59■□□□□ 0.41
HOMER3-205ENST00000542541 BMI1P35226 326 aa17.59■□□□□ 0.41
HOMER3-205ENST00000542541 OR1L4Q8NGR5 311 aa17.59■□□□□ 0.41
HOMER3-205ENST00000542541 ARV1Q9H2C2 271 aa17.59■□□□□ 0.41
HOMER3-205ENST00000542541 A0A1W2PS18 150 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms