RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 IGHV3-30P01768 117 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 IGHV3-33P01772 117 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 CD2P06729 351 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 CD3GP09693 182 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 IGHV3-30-3P0DP02 117 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 IGHV3-30-5P0DP03 117 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 BDKRB2P30411 391 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 SRIP30626 198 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 ETV6P41212 452 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 NPBWR1P48145 328 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 SERPINB10P48595 397 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 BRWD1-AS2P59051 145 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 TAS2R43P59537 309 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 TAS2R60P59551 318 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 CACNG7P62955 275 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 PRCDQ00LT1 54 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 MAPRE2Q15555 327 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 TBCEQ15813 527 aaPredicted RBP2.44□□□□□ -2.02
YBX3-205ENST00000536107 ACSM3Q53FZ2 586 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 COQ5Q5HYK3 327 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 CGB2Q6NT52 195 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 SPINK6Q6UWN8 80 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 ZNF493Q6ZR52 646 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 C6orf201Q7Z4U5 140 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 HSD17B13Q7Z5P4 300 aaPredicted RBP2.44□□□□□ -2.02
YBX3-205ENST00000536107 GPR141Q7Z602 305 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 BAP18Q8IXM2 172 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 PUSL1Q8N0Z8 303 aaKnown RBP2.44□□□□□ -2.02
YBX3-205ENST00000536107 JAGN1Q8N5M9 183 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 OR10J5Q8NHC4 309 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 TCTEX1D2Q8WW35 142 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 C5orf30Q96GV9 206 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 C16orf45Q96MC5 204 aaPredicted RBP2.44□□□□□ -2.02
YBX3-205ENST00000536107 FEVQ99581 238 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 GINS4Q9BRT9 223 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 TMEM138Q9NPI0 162 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 MED4Q9NPJ6 270 aa2.44□□□□□ -2.02
YBX3-205ENST00000536107 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
YBX3-205ENST00000536107 TEX13DA0A0J9YY54 714 aaPredicted RBP2.43□□□□□ -2.02
YBX3-205ENST00000536107 GAGE10A6NGK3 116 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 OR4C45A6NMZ5 311 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 E5RGE8 158 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 J3QLW9 94 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 NME4O00746 187 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 NDUFAB1O14561 156 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 PRKYO43930 277 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 SCGB2A1O75556 95 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 MT-CO2P00403 227 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 IGHV3-53P01767 116 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 ZNF19P17023 458 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 ZNF182P17025 639 aaPredicted RBP2.43□□□□□ -2.02
YBX3-205ENST00000536107 CRYBB3P26998 211 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 PPT1P50897 306 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 RPP30P78346 268 aaKnown RBP2.43□□□□□ -2.02
YBX3-205ENST00000536107 CDK5Q00535 292 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 ZNF85Q03923 595 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 WT1-ASQ06250 92 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 ST3GAL4Q11206 333 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 GAMTQ14353 236 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 ZNF880Q6PDB4 577 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 SIGLEC15Q6ZMC9 328 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 THAP8Q8NA92 274 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 OR5AK2Q8NH90 309 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 ATP6V0E2Q8NHE4 81 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 GIPC3Q8TF64 312 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 TMEM263Q8WUH6 116 aaKnown RBP2.43□□□□□ -2.02
YBX3-205ENST00000536107 ZC2HC1AQ96GY0 325 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 ZNF184Q99676 751 aaPredicted RBP2.43□□□□□ -2.02
YBX3-205ENST00000536107 LITAFQ99732 161 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 PLEKHJ1Q9NW61 149 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 DOK5Q9P104 306 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 PSORS1C1Q9UIG5 152 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 NSG2Q9Y328 171 aa2.43□□□□□ -2.02
YBX3-205ENST00000536107 TRAV8-3A0A0A6YYJ7 113 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 TRAV8-6A0A0B4J262 113 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 IGKV1-6A0A0C4DH72 117 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 A0A0J9YX75 114 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 TEX50A0A1B0GTY4 177 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 DAPL1A0PJW8 107 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 RNF222A6NCQ9 220 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 KRTAP16-1A8MUX0 517 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 TRDCB7Z8K6 153 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 I3L2K1 104 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 M0R129 80 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 UPK2O00526 184 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 CCSO14618 274 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 CRYGAP11844 174 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 CD36P16671 472 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 CELP19835 753 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 PSMB3P49720 205 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 CLDN12P56749 244 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 RHOBP62745 196 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 LINC01556Q5JQF7 62 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 OR10J3Q5JRS4 329 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 THOC7Q6I9Y2 204 aaKnown RBP2.42□□□□□ -2.02
YBX3-205ENST00000536107 Q6ZTI0 123 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 DHFR2Q86XF0 187 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 GID4Q8IVV7 300 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 ZNF664Q8N3J9 261 aa2.42□□□□□ -2.02
YBX3-205ENST00000536107 DMBX1Q8NFW5 382 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms