RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 HLA-DRB4P13762 266 aa7.23□□□□□ -1.25
CAPRIN1-209ENST00000530820 FKBP1AP62942 108 aaKnown RBP7.23□□□□□ -1.25
CAPRIN1-209ENST00000530820 TMEM240Q5SV17 173 aa7.23□□□□□ -1.25
CAPRIN1-209ENST00000530820 CEMP1Q6PRD7 247 aaPredicted RBP7.23□□□□□ -1.25
CAPRIN1-209ENST00000530820 ZNF414Q96IQ9 312 aa7.23□□□□□ -1.25
CAPRIN1-209ENST00000530820 RASL11BQ9BPW5 248 aa7.23□□□□□ -1.25
CAPRIN1-209ENST00000530820 HLA-DRB4X5D2U9 266 aa7.23□□□□□ -1.25
CAPRIN1-209ENST00000530820 PTPRZ1P23471 2315 aaPredicted RBP7.23□□□□□ -1.25
CAPRIN1-209ENST00000530820 IGHV3-43A0A0B4J1X8 118 aa7.23□□□□□ -1.25
CAPRIN1-209ENST00000530820 K7ESF4 209 aa7.23□□□□□ -1.25
CAPRIN1-209ENST00000530820 CD7P09564 240 aa7.23□□□□□ -1.25
CAPRIN1-209ENST00000530820 IGHV3-43DP0DP04 118 aa7.23□□□□□ -1.25
CAPRIN1-209ENST00000530820 C16orf52Q8NHV5 167 aa7.23□□□□□ -1.25
CAPRIN1-209ENST00000530820 NACAE9PAV3 2078 aa7.23□□□□□ -1.25
CAPRIN1-209ENST00000530820 PATJQ8NI35 1801 aa7.23□□□□□ -1.25
CAPRIN1-209ENST00000530820 LTBP1Q14766 1721 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 IZUMO1RA6ND01 250 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 NKX2-2O95096 273 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 IGKV1-39P01597 117 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 IGKV1D-39P04432 117 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 SP1P08047 785 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 ZIC1Q15915 447 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 RFESDQ8TAC1 157 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 PATE1Q8WXA2 126 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 TCF19Q9Y242 345 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 CACNA1HO95180 2353 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 NBASA2RRP1 2371 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 IGHV3-15A0A0B4J1V0 119 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 NDUFA3O95167 84 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 IGLV3-27P01718 113 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 IL4P05112 153 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 ZNF688P0C7X2 276 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 VN1R4Q7Z5H5 301 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 MOGAT3Q86VF5 341 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 TMEM101Q96IK0 257 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 PLXNA2O75051 1894 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 NUP210LQ5VU65 1888 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 SAA2-SAA4A0A096LPE2 208 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 LIPT2A6NK58 231 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 KIR2DS3K7RE56 304 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 CCL7P80098 99 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 FOXC1Q12948 553 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 RUNX3Q13761 415 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 KIR2DS3Q14952 304 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 FAM162BQ5T6X4 162 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 Q71RC1 249 aaPredicted RBP7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 LYPD6Q86Y78 171 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 GATD1Q8NB37 220 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 C10orf105Q8TEF2 133 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 NTN5Q8WTR8 489 aaPredicted RBP7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 TXNIPQ9H3M7 391 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 HIGD1BQ9P298 99 aa7.22□□□□□ -1.25
CAPRIN1-209ENST00000530820 IGKV1-12A0A0C4DH73 117 aa7.21□□□□□ -1.25
CAPRIN1-209ENST00000530820 IGKV1D-12P01611 117 aa7.21□□□□□ -1.25
CAPRIN1-209ENST00000530820 IGHV3-9P01782 118 aa7.21□□□□□ -1.25
CAPRIN1-209ENST00000530820 TFF1P04155 84 aa7.21□□□□□ -1.25
CAPRIN1-209ENST00000530820 TRPT1Q86TN4 253 aaKnown RBP7.21□□□□□ -1.25
CAPRIN1-209ENST00000530820 PROCRQ9UNN8 238 aa7.21□□□□□ -1.25
CAPRIN1-209ENST00000530820 BRWD3Q6RI45 1802 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 FAM236DA0A1B0GTK5 79 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 PRB1P04280 392 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 FAM236CP0DP71 79 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 GP1BBP13224 206 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 MYOD1P15172 320 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 ECI1P42126 302 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 MLANAQ16655 118 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 ZNF542PQ5EBM4 170 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 FNDC7Q5VTL7 733 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 MKXQ8IYA7 352 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 OR13C6PQ8NH95 151 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 NABP1Q96AH0 204 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 REPIN1Q9BWE0 567 aaKnown RBP7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 FNDC1Q4ZHG4 1894 aaPredicted RBP7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 SPENQ96T58 3664 aaKnown RBP7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 TRBV25-1A0A075B6N4 114 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 TMED7-TICAM2A0A0A6YYA0 188 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 A0A1W2PPI3 338 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 hADV38S2A0JD32 116 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 FRG2CA6NGY1 282 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 PYYP10082 97 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 COL8A1P27658 744 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 FAM27E3Q08E93 113 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 Q1RN00 199 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 CCL26Q9Y258 94 aa7.21□□□□□ -1.26
CAPRIN1-209ENST00000530820 IGKV1-27A0A075B6S5 117 aa7.2□□□□□ -1.26
CAPRIN1-209ENST00000530820 TRBV9A0A0B4J1U6 114 aa7.2□□□□□ -1.26
CAPRIN1-209ENST00000530820 A0A1W2PRU2 124 aa7.2□□□□□ -1.26
CAPRIN1-209ENST00000530820 CCL4L1Q8NHW4 92 aa7.2□□□□□ -1.26
CAPRIN1-209ENST00000530820 Q96M66 194 aa7.2□□□□□ -1.26
CAPRIN1-209ENST00000530820 DLL3Q9NYJ7 618 aa7.2□□□□□ -1.26
CAPRIN1-209ENST00000530820 LOC400499M0QZD8 3231 aa7.2□□□□□ -1.26
CAPRIN1-209ENST00000530820 hADV29S1A0JD25 119 aa7.2□□□□□ -1.26
CAPRIN1-209ENST00000530820 RBAKDNA6NC62 111 aa7.2□□□□□ -1.26
CAPRIN1-209ENST00000530820 RHODO00212 210 aa7.2□□□□□ -1.26
CAPRIN1-209ENST00000530820 CRIP2P52943 208 aaPredicted RBP7.2□□□□□ -1.26
CAPRIN1-209ENST00000530820 PMVKQ15126 192 aa7.2□□□□□ -1.26
CAPRIN1-209ENST00000530820 SCGB1D4Q6XE38 83 aa7.2□□□□□ -1.26
CAPRIN1-209ENST00000530820 LYZL4Q96KX0 146 aa7.2□□□□□ -1.26
CAPRIN1-209ENST00000530820 PRADC1Q9BSG0 188 aa7.2□□□□□ -1.26
CAPRIN1-209ENST00000530820 CALYQ9NYX4 217 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms