RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 LSM4Q9Y4Z0 139 aaKnown RBP10.47□□□□□ -0.73
CD44-224ENST00000526669 IGHV3-49A0A0A0MS15 119 aa10.46□□□□□ -0.73
CD44-224ENST00000526669 PFDN1O60925 122 aa10.46□□□□□ -0.73
CD44-224ENST00000526669 DFFBO76075 338 aa10.46□□□□□ -0.73
CD44-224ENST00000526669 IL4P05112 153 aa10.46□□□□□ -0.73
CD44-224ENST00000526669 RD3LP0DJH9 198 aa10.46□□□□□ -0.73
CD44-224ENST00000526669 CAMLGP49069 296 aa10.46□□□□□ -0.73
CD44-224ENST00000526669 ZFP69Q49AA0 526 aa10.46□□□□□ -0.73
CD44-224ENST00000526669 REC114Q7Z4M0 266 aa10.46□□□□□ -0.73
CD44-224ENST00000526669 BPIFCQ8NFQ6 507 aa10.46□□□□□ -0.73
CD44-224ENST00000526669 OR51G1Q8NGK1 321 aa10.46□□□□□ -0.73
CD44-224ENST00000526669 OR9G4Q8NGQ1 327 aa10.46□□□□□ -0.73
CD44-224ENST00000526669 Q8WTZ3 238 aa10.46□□□□□ -0.73
CD44-224ENST00000526669 PBDC1Q9BVG4 233 aa10.46□□□□□ -0.73
CD44-224ENST00000526669 GGTLC1Q9BX51 225 aa10.46□□□□□ -0.73
CD44-224ENST00000526669 RFNGQ9Y644 331 aa10.46□□□□□ -0.73
CD44-224ENST00000526669 IGHV3OR16-13A0A075B7E8 117 aa10.45□□□□□ -0.74
CD44-224ENST00000526669 IGHV3-74A0A0B4J1X5 117 aa10.45□□□□□ -0.74
CD44-224ENST00000526669 IFNA5P01569 189 aa10.45□□□□□ -0.74
CD44-224ENST00000526669 NKX2-5P52952 324 aaPredicted RBP10.45□□□□□ -0.74
CD44-224ENST00000526669 MIC13Q5XKP0 118 aa10.45□□□□□ -0.74
CD44-224ENST00000526669 KCNRGQ8N5I3 272 aa10.45□□□□□ -0.74
CD44-224ENST00000526669 WDR61Q9GZS3 305 aaKnown RBP10.45□□□□□ -0.74
CD44-224ENST00000526669 DOK5Q9P104 306 aa10.45□□□□□ -0.74
CD44-224ENST00000526669 TMEM213A2RRL7 107 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 C2orf70A6NJV1 201 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 SEC14L6B5MCN3 397 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 LGALS9O00182 355 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 FABP1P07148 127 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 LINC00869P0C866 280 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 IGLL1P15814 213 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 OPCMLQ14982 345 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 USF2Q15853 346 aaPredicted RBP10.44□□□□□ -0.74
CD44-224ENST00000526669 RPL7L1Q6DKI1 246 aaKnown RBP10.44□□□□□ -0.74
CD44-224ENST00000526669 TMUB2Q71RG4 321 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 SCGB1C1Q8TD33 95 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 RNF125Q96EQ8 232 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 HYLS1Q96M11 299 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 RSG1Q9BU20 258 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 NPCDR1Q9BY65 106 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 ARL6Q9H0F7 186 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 PEMTQ9UBM1 199 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 SLC45A2Q9UMX9 530 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 UFC1Q9Y3C8 167 aa10.44□□□□□ -0.74
CD44-224ENST00000526669 DNAH3Q8TD57 4116 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 IGHV3-66A0A0C4DH42 116 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 A0A0D9SG52 128 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 WI2-2373I1.2A0A1W2PRP0 233 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 A8MWP6 167 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 SAP30O75446 220 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 CSN3P07498 182 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 RAB31Q13636 194 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 ZNF345Q14585 488 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 LGALSLQ3ZCW2 172 aaPredicted RBP10.43□□□□□ -0.74
CD44-224ENST00000526669 ADAMTSL5Q6ZMM2 481 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 STPG3Q8N7X2 389 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 HSD17B11Q8NBQ5 300 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 OR1B1Q8NGR6 318 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 ARPC5LQ9BPX5 153 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 GINS3Q9BRX5 216 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 ELOVL1Q9BW60 279 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 PXMP4Q9Y6I8 212 aa10.43□□□□□ -0.74
CD44-224ENST00000526669 KANTRA0A1W2PQU2 76 aa10.42□□□□□ -0.74
CD44-224ENST00000526669 BOLA2-SMG1P6H3BVE0 249 aa10.42□□□□□ -0.74
CD44-224ENST00000526669 BCL2L11O43521 198 aa10.42□□□□□ -0.74
CD44-224ENST00000526669 APOHP02749 345 aaPredicted RBP10.42□□□□□ -0.74
CD44-224ENST00000526669 ORM2P19652 201 aa10.42□□□□□ -0.74
CD44-224ENST00000526669 B2MP61769 119 aa10.42□□□□□ -0.74
CD44-224ENST00000526669 SELENOTP62341 195 aa10.42□□□□□ -0.74
CD44-224ENST00000526669 ZNF266Q14584 549 aa10.42□□□□□ -0.74
CD44-224ENST00000526669 IL34Q6ZMJ4 242 aa10.42□□□□□ -0.74
CD44-224ENST00000526669 ZNF709Q8N972 641 aa10.42□□□□□ -0.74
CD44-224ENST00000526669 METTL26Q96S19 204 aa10.42□□□□□ -0.74
CD44-224ENST00000526669 DAZ1Q9NQZ3 744 aaKnown RBP10.42□□□□□ -0.74
CD44-224ENST00000526669 CYTL1Q9NRR1 136 aa10.42□□□□□ -0.74
CD44-224ENST00000526669 RABAC1Q9UI14 185 aa10.42□□□□□ -0.74
CD44-224ENST00000526669 BORCS7-ASMTA0A0B4J1R7 106 aa10.41□□□□□ -0.74
CD44-224ENST00000526669 IGHV7-4-1A0A0J9YVY3 117 aa10.41□□□□□ -0.74
CD44-224ENST00000526669 MPDU1O75352 247 aa10.41□□□□□ -0.74
CD44-224ENST00000526669 HNRNPCP07910 306 aaKnown RBP eCLIP10.41□□□□□ -0.74
CD44-224ENST00000526669 OR5G3P0C626 314 aa10.41□□□□□ -0.74
CD44-224ENST00000526669 FOLR2P14207 255 aa10.41□□□□□ -0.74
CD44-224ENST00000526669 ELLP55199 621 aaPredicted RBP10.41□□□□□ -0.74
CD44-224ENST00000526669 PRR31Q5SQ13 230 aa10.41□□□□□ -0.74
CD44-224ENST00000526669 C9orf62Q8N4C0 152 aa10.41□□□□□ -0.74
CD44-224ENST00000526669 WFDC9Q8NEX5 89 aa10.41□□□□□ -0.74
CD44-224ENST00000526669 DYNLRB2Q8TF09 96 aa10.41□□□□□ -0.74
CD44-224ENST00000526669 ST8SIA2Q92186 375 aa10.41□□□□□ -0.74
CD44-224ENST00000526669 PPP1R14BQ96C90 147 aa10.41□□□□□ -0.74
CD44-224ENST00000526669 ZNF471Q9BX82 626 aaPredicted RBP10.41□□□□□ -0.74
CD44-224ENST00000526669 SLC39A9Q9NUM3 307 aa10.41□□□□□ -0.74
CD44-224ENST00000526669 MGAM2Q2M2H8 2515 aa10.41□□□□□ -0.74
CD44-224ENST00000526669 C17orf112F2Z3M2 114 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 K7EMT4 169 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 TAAR5O14804 337 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 CBLN1P23435 193 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 NPPCP23582 126 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 ATP6V0CP27449 155 aa10.4□□□□□ -0.74
CD44-224ENST00000526669 RPL29P47914 159 aaKnown RBP10.4□□□□□ -0.74
CD44-224ENST00000526669 PRR20EP86478 221 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms