RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 RNASE11Q8TAA1 199 aaKnown RBP10.37□□□□□ -0.75
CSTF3-204ENST00000524556 TMEM170AQ8WVE7 144 aa10.37□□□□□ -0.75
CSTF3-204ENST00000524556 C7orf50Q9BRJ6 194 aaKnown RBP10.37□□□□□ -0.75
CSTF3-204ENST00000524556 ATG101Q9BSB4 218 aa10.37□□□□□ -0.75
CSTF3-204ENST00000524556 SCRT2Q9NQ03 307 aa10.37□□□□□ -0.75
CSTF3-204ENST00000524556 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.37□□□□□ -0.75
CSTF3-204ENST00000524556 KLK11Q9UBX7 282 aa10.37□□□□□ -0.75
CSTF3-204ENST00000524556 APOA1P02647 267 aa10.36□□□□□ -0.75
CSTF3-204ENST00000524556 PSG1P11464 419 aa10.36□□□□□ -0.75
CSTF3-204ENST00000524556 PSMB3P49720 205 aa10.36□□□□□ -0.75
CSTF3-204ENST00000524556 RRN3P1Q2M238 152 aa10.36□□□□□ -0.75
CSTF3-204ENST00000524556 SPATA31B1PQ5VZV4 182 aa10.36□□□□□ -0.75
CSTF3-204ENST00000524556 GSG1LQ6UXU4 331 aa10.36□□□□□ -0.75
CSTF3-204ENST00000524556 SLC24A4Q8NFF2 622 aa10.36□□□□□ -0.75
CSTF3-204ENST00000524556 ZNRF2Q8NHG8 242 aa10.36□□□□□ -0.75
CSTF3-204ENST00000524556 COPZ2Q9P299 210 aa10.36□□□□□ -0.75
CSTF3-204ENST00000524556 SOCS3O14543 225 aa10.35□□□□□ -0.75
CSTF3-204ENST00000524556 B3GALNT1O75752 331 aa10.35□□□□□ -0.75
CSTF3-204ENST00000524556 NUP62P37198 522 aaPredicted RBP10.35□□□□□ -0.75
CSTF3-204ENST00000524556 RORCP51449 518 aa10.35□□□□□ -0.75
CSTF3-204ENST00000524556 FAM219AQ8IW50 185 aa10.35□□□□□ -0.75
CSTF3-204ENST00000524556 CCDC71LQ8N9Z2 235 aa10.35□□□□□ -0.75
CSTF3-204ENST00000524556 ZFAND1Q8TCF1 268 aa10.35□□□□□ -0.75
CSTF3-204ENST00000524556 RNF125Q96EQ8 232 aa10.35□□□□□ -0.75
CSTF3-204ENST00000524556 ACY3Q96HD9 319 aa10.35□□□□□ -0.75
CSTF3-204ENST00000524556 COMMD3Q9UBI1 195 aa10.35□□□□□ -0.75
CSTF3-204ENST00000524556 CDS2O95674 445 aa10.34□□□□□ -0.75
CSTF3-204ENST00000524556 ALDH3B2P48448 385 aa10.34□□□□□ -0.75
CSTF3-204ENST00000524556 PAX9P55771 341 aa10.34□□□□□ -0.75
CSTF3-204ENST00000524556 LSM3P62310 102 aaKnown RBP10.34□□□□□ -0.75
CSTF3-204ENST00000524556 RNASE10Q5GAN6 216 aaKnown RBP10.34□□□□□ -0.75
CSTF3-204ENST00000524556 FAM78BQ5VT40 261 aa10.34□□□□□ -0.75
CSTF3-204ENST00000524556 ARRDC1Q8N5I2 433 aa10.34□□□□□ -0.75
CSTF3-204ENST00000524556 COQ8AQ8NI60 647 aa10.34□□□□□ -0.75
CSTF3-204ENST00000524556 MAGT1Q9H0U3 335 aa10.34□□□□□ -0.75
CSTF3-204ENST00000524556 Q9H521 79 aa10.34□□□□□ -0.75
CSTF3-204ENST00000524556 PFDN2Q9UHV9 154 aa10.34□□□□□ -0.75
CSTF3-204ENST00000524556 CEBPZOSA8MTT3 80 aa10.33□□□□□ -0.76
CSTF3-204ENST00000524556 F6UB75 175 aa10.33□□□□□ -0.76
CSTF3-204ENST00000524556 CD3DP04234 171 aa10.33□□□□□ -0.76
CSTF3-204ENST00000524556 OR8G2PQ6IF36 304 aa10.33□□□□□ -0.76
CSTF3-204ENST00000524556 EBLN2Q6P2I7 272 aa10.33□□□□□ -0.76
CSTF3-204ENST00000524556 NOXA1Q86UR1 476 aa10.33□□□□□ -0.76
CSTF3-204ENST00000524556 OR13C8Q8NGS7 320 aa10.33□□□□□ -0.76
CSTF3-204ENST00000524556 TERB2Q8NHR7 220 aa10.33□□□□□ -0.76
CSTF3-204ENST00000524556 PBDC1Q9BVG4 233 aa10.33□□□□□ -0.76
CSTF3-204ENST00000524556 TMEM222Q9H0R3 208 aa10.33□□□□□ -0.76
CSTF3-204ENST00000524556 A0A0J9YX75 114 aa10.32□□□□□ -0.76
CSTF3-204ENST00000524556 ISLRO14498 428 aa10.32□□□□□ -0.76
CSTF3-204ENST00000524556 ELK1P19419 428 aa10.32□□□□□ -0.76
CSTF3-204ENST00000524556 SUPT4H1P63272 117 aaKnown RBP10.32□□□□□ -0.76
CSTF3-204ENST00000524556 C1orf194Q5T5A4 169 aa10.32□□□□□ -0.76
CSTF3-204ENST00000524556 SPATA12Q7Z6I5 190 aa10.32□□□□□ -0.76
CSTF3-204ENST00000524556 SELENOHQ8IZQ5 122 aaKnown RBP10.32□□□□□ -0.76
CSTF3-204ENST00000524556 LHFPL5Q8TAF8 219 aa10.32□□□□□ -0.76
CSTF3-204ENST00000524556 GLYATL2Q8WU03 294 aa10.32□□□□□ -0.76
CSTF3-204ENST00000524556 GPR146Q96CH1 333 aa10.32□□□□□ -0.76
CSTF3-204ENST00000524556 CACNG5Q9UF02 275 aa10.32□□□□□ -0.76
CSTF3-204ENST00000524556 LYRM9A8MSI8 78 aa10.31□□□□□ -0.76
CSTF3-204ENST00000524556 A8MTW9 85 aa10.31□□□□□ -0.76
CSTF3-204ENST00000524556 OR5AC1P0C628 307 aa10.31□□□□□ -0.76
CSTF3-204ENST00000524556 KLF9Q13886 244 aaPredicted RBP10.31□□□□□ -0.76
CSTF3-204ENST00000524556 RNASE12Q5GAN4 147 aaKnown RBP10.31□□□□□ -0.76
CSTF3-204ENST00000524556 NMSQ5H8A3 153 aa10.31□□□□□ -0.76
CSTF3-204ENST00000524556 MARCH1Q8TCQ1 289 aa10.31□□□□□ -0.76
CSTF3-204ENST00000524556 RBPMSQ93062 196 aaKnown RBP10.31□□□□□ -0.76
CSTF3-204ENST00000524556 YIPF6Q96EC8 236 aa10.31□□□□□ -0.76
CSTF3-204ENST00000524556 IGF2BP2-AS1Q96M15 143 aa10.31□□□□□ -0.76
CSTF3-204ENST00000524556 ABHD1Q96SE0 405 aa10.31□□□□□ -0.76
CSTF3-204ENST00000524556 TMEM208Q9BTX3 173 aa10.31□□□□□ -0.76
CSTF3-204ENST00000524556 TEX13DA0A0J9YY54 714 aaPredicted RBP10.3□□□□□ -0.76
CSTF3-204ENST00000524556 HPGDSO60760 199 aa10.3□□□□□ -0.76
CSTF3-204ENST00000524556 NUDT3O95989 172 aa10.3□□□□□ -0.76
CSTF3-204ENST00000524556 PRM2P04554 102 aa10.3□□□□□ -0.76
CSTF3-204ENST00000524556 TBPP20226 339 aa10.3□□□□□ -0.76
CSTF3-204ENST00000524556 CCL18P55774 89 aa10.3□□□□□ -0.76
CSTF3-204ENST00000524556 AMTNQ6UX39 209 aa10.3□□□□□ -0.76
CSTF3-204ENST00000524556 OR4D10Q8NGI6 311 aa10.3□□□□□ -0.76
CSTF3-204ENST00000524556 OR52I2Q8NH67 350 aa10.3□□□□□ -0.76
CSTF3-204ENST00000524556 C20orf173Q96LM9 149 aa10.3□□□□□ -0.76
CSTF3-204ENST00000524556 RPRMQ9NS64 109 aa10.3□□□□□ -0.76
CSTF3-204ENST00000524556 DOK5Q9P104 306 aa10.3□□□□□ -0.76
CSTF3-204ENST00000524556 LINC00588Q9Y4M8 146 aa10.3□□□□□ -0.76
CSTF3-204ENST00000524556 IGKV1D-37A0A075B6S9 117 aa10.29□□□□□ -0.76
CSTF3-204ENST00000524556 ZNF705GA8MUZ8 300 aaPredicted RBP10.29□□□□□ -0.76
CSTF3-204ENST00000524556 F5H768 121 aa10.29□□□□□ -0.76
CSTF3-204ENST00000524556 DEFB130BP0DP73 79 aa10.29□□□□□ -0.76
CSTF3-204ENST00000524556 DEFB130AP0DP74 79 aa10.29□□□□□ -0.76
CSTF3-204ENST00000524556 ZNF90Q03938 601 aa10.29□□□□□ -0.76
CSTF3-204ENST00000524556 MEF2DQ14814 521 aa10.29□□□□□ -0.76
CSTF3-204ENST00000524556 SCGB2B2Q4G0G5 96 aa10.29□□□□□ -0.76
CSTF3-204ENST00000524556 SAMD13Q5VXD3 122 aa10.29□□□□□ -0.76
CSTF3-204ENST00000524556 RTBDNQ9BSG5 229 aaPredicted RBP10.29□□□□□ -0.76
CSTF3-204ENST00000524556 NAA60Q9H7X0 242 aa10.29□□□□□ -0.76
CSTF3-204ENST00000524556 MTFP1Q9UDX5 166 aa10.29□□□□□ -0.76
CSTF3-204ENST00000524556 CACFD1Q9UGQ2 172 aa10.29□□□□□ -0.76
CSTF3-204ENST00000524556 U3KQ87 197 aa10.29□□□□□ -0.76
CSTF3-204ENST00000524556 FAT1Q14517 4588 aa10.29□□□□□ -0.76
CSTF3-204ENST00000524556 ZFP92A6NM28 416 aa10.28□□□□□ -0.76
CSTF3-204ENST00000524556 TNFAIP8O95379 198 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms