RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 OR2K2Q8NGT1 345 aa13.68□□□□□ -0.22
VEGFA-222ENST00000520948 TECRQ9NZ01 308 aaKnown RBP13.68□□□□□ -0.22
VEGFA-222ENST00000520948 MLXQ9UH92 298 aa13.68□□□□□ -0.22
VEGFA-222ENST00000520948 SMPXQ9UHP9 88 aa13.68□□□□□ -0.22
VEGFA-222ENST00000520948 IGHV7-4-1A0A0J9YVY3 117 aa13.67□□□□□ -0.22
VEGFA-222ENST00000520948 C3orf84H3BNL1 204 aa13.67□□□□□ -0.22
VEGFA-222ENST00000520948 ZNF207O43670 478 aaKnown RBP13.67□□□□□ -0.22
VEGFA-222ENST00000520948 PET100P0DJ07 73 aa13.67□□□□□ -0.22
VEGFA-222ENST00000520948 S100A11P31949 105 aa13.67□□□□□ -0.22
VEGFA-222ENST00000520948 NHLH2Q02577 135 aa13.67□□□□□ -0.22
VEGFA-222ENST00000520948 SLC38A11Q08AI6 406 aa13.67□□□□□ -0.22
VEGFA-222ENST00000520948 VWC2Q2TAL6 325 aa13.67□□□□□ -0.22
VEGFA-222ENST00000520948 Q5BKY6 102 aa13.67□□□□□ -0.22
VEGFA-222ENST00000520948 CHAC2Q8WUX2 184 aa13.67□□□□□ -0.22
VEGFA-222ENST00000520948 CRYBB3P26998 211 aa13.66□□□□□ -0.22
VEGFA-222ENST00000520948 RAP2BP61225 183 aa13.66□□□□□ -0.22
VEGFA-222ENST00000520948 EWSR1Q01844 656 aaKnown RBP eCLIP13.66□□□□□ -0.223e-7■■■□□ 16.8
VEGFA-222ENST00000520948 AKR1C1Q04828 323 aa13.66□□□□□ -0.22
VEGFA-222ENST00000520948 TMEM217Q8N7C4 229 aa13.66□□□□□ -0.22
VEGFA-222ENST00000520948 GINS3Q9BRX5 216 aa13.66□□□□□ -0.22
VEGFA-222ENST00000520948 SLC25A31Q9H0C2 315 aa13.66□□□□□ -0.22
VEGFA-222ENST00000520948 MBD2Q9UBB5 411 aa13.66□□□□□ -0.22
VEGFA-222ENST00000520948 U3KQE9 123 aa13.66□□□□□ -0.22
VEGFA-222ENST00000520948 HUWE1Q7Z6Z7 4374 aaKnown RBP13.66□□□□□ -0.22
VEGFA-222ENST00000520948 IZUMO1RA6ND01 250 aa13.65□□□□□ -0.22
VEGFA-222ENST00000520948 CHEK1O14757 476 aa13.65□□□□□ -0.22
VEGFA-222ENST00000520948 ATP6V1FQ16864 119 aa13.65□□□□□ -0.22
VEGFA-222ENST00000520948 CD300EQ496F6 205 aaPredicted RBP13.65□□□□□ -0.22
VEGFA-222ENST00000520948 TMEM182Q6ZP80 229 aaPredicted RBP13.65□□□□□ -0.22
VEGFA-222ENST00000520948 STX12Q86Y82 276 aa13.65□□□□□ -0.22
VEGFA-222ENST00000520948 OR51G1Q8NGK1 321 aa13.65□□□□□ -0.22
VEGFA-222ENST00000520948 VSIRQ9H7M9 311 aa13.65□□□□□ -0.22
VEGFA-222ENST00000520948 SMCO3A2RU48 225 aa13.64□□□□□ -0.23
VEGFA-222ENST00000520948 ZNF785A8K8V0 405 aa13.64□□□□□ -0.23
VEGFA-222ENST00000520948 APOHP02749 345 aaPredicted RBP13.64□□□□□ -0.23
VEGFA-222ENST00000520948 IL4P05112 153 aa13.64□□□□□ -0.23
VEGFA-222ENST00000520948 FABP1P07148 127 aa13.64□□□□□ -0.23
VEGFA-222ENST00000520948 NPPCP23582 126 aa13.64□□□□□ -0.23
VEGFA-222ENST00000520948 HBG1P69891 147 aa13.64□□□□□ -0.23
VEGFA-222ENST00000520948 HBG2P69892 147 aa13.64□□□□□ -0.23
VEGFA-222ENST00000520948 USF2Q15853 346 aaPredicted RBP13.64□□□□□ -0.23
VEGFA-222ENST00000520948 TEPPQ6URK8 271 aa13.64□□□□□ -0.23
VEGFA-222ENST00000520948 THAP6Q8TBB0 222 aa13.64□□□□□ -0.23
VEGFA-222ENST00000520948 RHPN1-AS1Q9BWJ2 59 aa13.64□□□□□ -0.23
VEGFA-222ENST00000520948 SMAD5-AS1Q9Y6J3 95 aa13.64□□□□□ -0.23
VEGFA-222ENST00000520948 STAB2Q8WWQ8 2551 aa13.64□□□□□ -0.23
VEGFA-222ENST00000520948 G3V3Q6 166 aa13.63□□□□□ -0.23
VEGFA-222ENST00000520948 RPL12P30050 165 aaKnown RBP13.63□□□□□ -0.23
VEGFA-222ENST00000520948 BAXQ07812 192 aa13.63□□□□□ -0.23
VEGFA-222ENST00000520948 FGL1Q08830 312 aa13.63□□□□□ -0.23
VEGFA-222ENST00000520948 BTNL8Q6UX41 500 aa13.63□□□□□ -0.23
VEGFA-222ENST00000520948 CYP2G1PQ6ZSU1 146 aa13.63□□□□□ -0.23
VEGFA-222ENST00000520948 LILRB2Q8N423 598 aa13.63□□□□□ -0.23
VEGFA-222ENST00000520948 MUC7Q8TAX7 377 aa13.63□□□□□ -0.23
VEGFA-222ENST00000520948 DYNLRB2Q8TF09 96 aa13.63□□□□□ -0.23
VEGFA-222ENST00000520948 RNF125Q96EQ8 232 aa13.63□□□□□ -0.23
VEGFA-222ENST00000520948 TMEM147Q9BVK8 224 aa13.63□□□□□ -0.23
VEGFA-222ENST00000520948 WDR83OSQ9Y284 106 aa13.63□□□□□ -0.23
VEGFA-222ENST00000520948 TRAV25A0A0B4J276 109 aa13.62□□□□□ -0.23
VEGFA-222ENST00000520948 CFDP00746 253 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-222ENST00000520948 GATA2P23769 480 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-222ENST00000520948 OR2F1Q13607 317 aa13.62□□□□□ -0.23
VEGFA-222ENST00000520948 CASC10Q5T4H9 136 aa13.62□□□□□ -0.23
VEGFA-222ENST00000520948 FAM90A2PQ658T7 463 aa13.62□□□□□ -0.23
VEGFA-222ENST00000520948 LCN12Q6JVE5 192 aa13.62□□□□□ -0.23
VEGFA-222ENST00000520948 SBSPONQ8IVN8 264 aa13.62□□□□□ -0.23
VEGFA-222ENST00000520948 TMEM61Q8N0U2 210 aa13.62□□□□□ -0.23
VEGFA-222ENST00000520948 OR5C1Q8NGR4 320 aa13.62□□□□□ -0.23
VEGFA-222ENST00000520948 ST8SIA2Q92186 375 aa13.62□□□□□ -0.23
VEGFA-222ENST00000520948 RCHY1Q96PM5 261 aa13.62□□□□□ -0.23
VEGFA-222ENST00000520948 METTL26Q96S19 204 aa13.62□□□□□ -0.23
VEGFA-222ENST00000520948 UQCC1Q9NVA1 299 aa13.62□□□□□ -0.23
VEGFA-222ENST00000520948 HSPB11Q9Y547 144 aa13.62□□□□□ -0.23
VEGFA-222ENST00000520948 SELENOKQ9Y6D0 94 aa13.62□□□□□ -0.23
VEGFA-222ENST00000520948 IGHV3-49A0A0A0MS15 119 aa13.61□□□□□ -0.23
VEGFA-222ENST00000520948 HNRNPCP07910 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
VEGFA-222ENST00000520948 GP9P14770 177 aa13.61□□□□□ -0.23
VEGFA-222ENST00000520948 PLP1P60201 277 aa13.61□□□□□ -0.23
VEGFA-222ENST00000520948 SELENOTP62341 195 aa13.61□□□□□ -0.23
VEGFA-222ENST00000520948 STPG3Q8N7X2 389 aa13.61□□□□□ -0.23
VEGFA-222ENST00000520948 RNF2Q99496 336 aa13.61□□□□□ -0.23
VEGFA-222ENST00000520948 MGST2Q99735 147 aa13.61□□□□□ -0.23
VEGFA-222ENST00000520948 SLC45A2Q9UMX9 530 aa13.61□□□□□ -0.23
VEGFA-222ENST00000520948 DYNC2H1Q8NCM8 4307 aaKnown RBP13.6□□□□□ -0.23
VEGFA-222ENST00000520948 IGHV3OR16-13A0A075B7E8 117 aa13.6□□□□□ -0.23
VEGFA-222ENST00000520948 IGHV3-74A0A0B4J1X5 117 aa13.6□□□□□ -0.23
VEGFA-222ENST00000520948 AGPAT2O15120 278 aa13.6□□□□□ -0.23
VEGFA-222ENST00000520948 BPIFCQ8NFQ6 507 aa13.6□□□□□ -0.23
VEGFA-222ENST00000520948 OR2T35Q8NGX2 323 aa13.6□□□□□ -0.23
VEGFA-222ENST00000520948 A0A1W2PS18 150 aa13.59□□□□□ -0.23
VEGFA-222ENST00000520948 TSPAN4O14817 238 aa13.59□□□□□ -0.23
VEGFA-222ENST00000520948 BUB3O43684 328 aa13.59□□□□□ -0.23
VEGFA-222ENST00000520948 EIF2B2P49770 351 aaKnown RBP13.59□□□□□ -0.23
VEGFA-222ENST00000520948 C16orf54Q6UWD8 224 aa13.59□□□□□ -0.23
VEGFA-222ENST00000520948 RABAC1Q9UI14 185 aa13.59□□□□□ -0.23
VEGFA-222ENST00000520948 RYR2Q92736 4967 aa13.59□□□□□ -0.23
VEGFA-222ENST00000520948 SORL1Q92673 2214 aa13.58□□□□□ -0.24
VEGFA-222ENST00000520948 CD5P06127 495 aa13.58□□□□□ -0.24
VEGFA-222ENST00000520948 LINC00869P0C866 280 aa13.58□□□□□ -0.24
VEGFA-222ENST00000520948 BMI1P35226 326 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms