RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 FREM1Q5H8C1 2179 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 CSPG4Q6UVK1 2322 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 SMIM27A0A1W2PRY6 76 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 VSTM5A8MXK1 200 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 SLC17A3O00476 420 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 ZNF253O75346 499 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 ACTL6BO94805 426 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 APCSP02743 223 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 RNASE2P10153 161 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 HIST1H1EP10412 219 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 MGST1P10620 155 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 CRYBB3P26998 211 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 AMTP48728 403 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 GNG10P50151 68 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 KRTAP1-1Q07627 177 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 GAGE1Q13065 139 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 PMCHL1Q16048 86 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 TPTE2P1Q5T6R2 138 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 TEX36Q5VZQ5 186 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 ZNF833PQ6ZTB9 187 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 Q6ZWC4 215 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 ATP5L2Q7Z4Y8 100 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 C8orf31Q8N9H6 132 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 ZNRF1Q8ND25 227 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 OR10X1Q8NGY0 326 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 GRAMD2BQ96HH9 432 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 HARBI1Q96MB7 349 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 RBM14Q96PK6 669 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 GAFA1Q96PS6 74 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 SNHG12Q9BXW3 62 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 SAP30LQ9HAJ7 183 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 PPP1R14DQ9NXH3 145 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 SOX21Q9Y651 276 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 TLN2Q9Y4G6 2542 aa6.99□□□□□ -1.29
CTNNA1-223ENST00000520520 TEX50A0A1B0GTY4 177 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 ADARB2-AS1A8MUL3 147 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 DIRC3C9JPN6 131 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 CORTO00230 105 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 NDUFS7O75251 213 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 SAA1P0DJI8 122 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 ZNF134P52741 427 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 LINC00205P59089 165 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 KRTDAPP60985 99 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 RPL8P62917 257 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 VMA21Q3ZAQ7 101 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 TMEM177Q53S58 311 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 COL5A1-AS1Q5SY13 56 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 C10orf113Q5VZT2 155 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 ZNF788Q6ZQV5 615 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 TMEM136Q6ZRR5 245 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 NUP37Q8NFH4 326 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 TMEM167AQ8TBQ9 72 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 IGF2BP2-AS1Q96M15 143 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 DNAJC4Q9NNZ3 241 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 SERTAD4Q9NUC0 356 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 UQCR10Q9UDW1 63 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 USF3Q68DE3 2245 aa6.98□□□□□ -1.29
CTNNA1-223ENST00000520520 TCRBV4S1A1TA0A5B7 111 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 GGTLC3B5MD39 225 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 PEX7O00628 323 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 ZNF324O75467 553 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 IGHV1-46P01743 117 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 GPX1P07203 203 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 CD3EP07766 207 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 LINC00614P0C842 121 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 PMCHP20382 165 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 MC5RP33032 325 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 UBE2G1P62253 170 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 SRSF2Q01130 221 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 VHLLQ6RSH7 139 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 TMEM108Q6UXF1 575 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 THAP8Q8NA92 274 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 OR4C13Q8NGP0 309 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 VN1R17PQ8TDU5 208 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 TMEM186Q96B77 213 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 FLYWCH2Q96CP2 140 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 C1orf159Q96HA4 380 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 TMEM68Q96MH6 324 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 SLC25A33Q9BSK2 321 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 PAXXQ9BUH6 204 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 GNB4Q9HAV0 340 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 WASHC3Q9Y3C0 194 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 PAM16Q9Y3D7 125 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 TBL2Q9Y4P3 447 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 COL6A5A8TX70 2615 aa6.97□□□□□ -1.29
CTNNA1-223ENST00000520520 CR1P17927 2039 aa6.96□□□□□ -1.29
CTNNA1-223ENST00000520520 HSBP1O75506 76 aa6.96□□□□□ -1.3
CTNNA1-223ENST00000520520 FOXH1O75593 365 aa6.96□□□□□ -1.3
CTNNA1-223ENST00000520520 IGHV4-39P01824 125 aa6.96□□□□□ -1.3
CTNNA1-223ENST00000520520 CT45A6P0DMU7 189 aa6.96□□□□□ -1.3
CTNNA1-223ENST00000520520 CT45A5P0DMU8 189 aa6.96□□□□□ -1.3
CTNNA1-223ENST00000520520 CT45A7P0DMV0 189 aa6.96□□□□□ -1.3
CTNNA1-223ENST00000520520 SELLP14151 372 aa6.96□□□□□ -1.3
CTNNA1-223ENST00000520520 SRIP30626 198 aa6.96□□□□□ -1.3
CTNNA1-223ENST00000520520 COMPP49747 757 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-223ENST00000520520 HNRNPA3P51991 378 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-223ENST00000520520 PRSS8Q16651 343 aa6.96□□□□□ -1.3
CTNNA1-223ENST00000520520 CT83Q5H943 113 aa6.96□□□□□ -1.3
CTNNA1-223ENST00000520520 LINC00311Q8N616 119 aa6.96□□□□□ -1.3
CTNNA1-223ENST00000520520 IGFBPL1Q8WX77 278 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms