RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 AWAT2Q6E213 333 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 OR4A47Q6IF82 309 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 LPCAT3Q6P1A2 487 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 KCNIP4Q6PIL6 250 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 GLIPR1L1Q6UWM5 242 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 ODF3L1Q8IXM7 274 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 TMEM61Q8N0U2 210 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 OR2AK2Q8NG84 335 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 OR10V1Q8NGI7 309 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 OR1L6Q8NGR2 347 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 OR10R2Q8NGX6 335 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 SCGB3A2Q96PL1 93 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 YPEL2Q96QA6 119 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 FYTTD1Q96QD9 318 aaKnown RBP3.6□□□□□ -1.83
SDCBP-207ENST00000520168 GPER1Q99527 375 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 S100A13Q99584 98 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 RARRES2Q99969 163 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 RNF126Q9BV68 326 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 GGACTQ9BVM4 153 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 C20orf85Q9H1P6 137 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 ARV1Q9H2C2 271 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 SCRT2Q9NQ03 307 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 IL36GQ9NZH8 169 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 TRAPPC2LQ9UL33 140 aa3.6□□□□□ -1.83
SDCBP-207ENST00000520168 MYCBP2O75592 4640 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 IGHV4-4A0A075B6R2 117 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 TRAV10A0A0B4J240 114 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 TRBV7-9A0A0J9YWB2 115 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 FAM90A7PA6NKC0 464 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 FAM90A23PA8MXZ1 464 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 MCRIP1C9JLW8 97 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 H0YJW9 148 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 BMPR1BO00238 502 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 SNAI2O43623 268 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 TRBV12-3P01733 135 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 HBZP02008 142 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 CD3DP04234 171 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 GIPP09681 153 aaPredicted RBP3.59□□□□□ -1.83
SDCBP-207ENST00000520168 OR10J4P0C629 311 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 CBLN1P23435 193 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 UBE2MP61081 183 aaKnown RBP3.59□□□□□ -1.83
SDCBP-207ENST00000520168 IFITM2Q01629 132 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 UNC119Q13432 240 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 EXOSC2Q13868 293 aaKnown RBP3.59□□□□□ -1.83
SDCBP-207ENST00000520168 RBMY1FQ15415 496 aaKnown RBP3.59□□□□□ -1.83
SDCBP-207ENST00000520168 FAM106AQ4KMX7 169 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 OR2B11Q5JQS5 317 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 LEMD1Q68G75 181 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 OR8G2PQ6IF36 304 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 ASCL4Q6XD76 172 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 PDPNQ86YL7 162 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 GPHB5Q86YW7 130 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 GAPTQ8N292 157 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 INO80EQ8NBZ0 244 aaPredicted RBP3.59□□□□□ -1.83
SDCBP-207ENST00000520168 ADAD2Q8NCV1 583 aaKnown RBP3.59□□□□□ -1.83
SDCBP-207ENST00000520168 OR51S1Q8NGJ8 323 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 OR4C16Q8NGL9 310 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 OR11H2Q8NH07 326 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 UBALD1Q8TB05 177 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF431Q8TF32 576 aaPredicted RBP3.59□□□□□ -1.83
SDCBP-207ENST00000520168 TNFAIP8L1Q8WVP5 186 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 PTH2Q96A98 100 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 RAB3CQ96E17 227 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 OR2A7Q96R45 310 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 CLCC1Q96S66 551 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 VPS25Q9BRG1 176 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 GINS4Q9BRT9 223 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 TMEM59Q9BXS4 323 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 SELENOIQ9C0D9 397 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF436Q9C0F3 470 aaPredicted RBP3.59□□□□□ -1.83
SDCBP-207ENST00000520168 LPAR5Q9H1C0 372 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 MAP6D1Q9H9H5 199 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 KCNIP1Q9NZI2 227 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 ANAPC10Q9UM13 185 aa3.59□□□□□ -1.83
SDCBP-207ENST00000520168 DNAH5Q8TE73 4624 aa3.59□□□□□ -1.84
SDCBP-207ENST00000520168 LINC00862A6NCI5 91 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 TMEM235A6NFC5 223 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 C9orf118A6NHY6 69 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 MPTX1A8MV57 137 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 KRBOX1C9JBD0 128 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 GEMIN2O14893 280 aaKnown RBP3.58□□□□□ -1.84
SDCBP-207ENST00000520168 ADAP1O75689 374 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 AMBPP02760 352 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 OR9G9P0C7N8 305 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 SPP1P10451 314 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 PTHLHP12272 177 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 HIST1H1DP16402 221 aaKnown RBP3.58□□□□□ -1.84
SDCBP-207ENST00000520168 GNB3P16520 340 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 S100GP29377 79 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 RPS20P60866 119 aaKnown RBP3.58□□□□□ -1.84
SDCBP-207ENST00000520168 RPS27AP62979 156 aaKnown RBP3.58□□□□□ -1.84
SDCBP-207ENST00000520168 ATP5G2Q06055 141 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 PSG5Q15238 335 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 MRGPRG-AS1Q2M3A8 158 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 VWC2Q2TAL6 325 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 C1orf134Q5TEV5 83 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 LAMTOR1Q6IAA8 161 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 OR10K2Q6IF99 312 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 TMEM144Q7Z5S9 345 aa3.58□□□□□ -1.84
SDCBP-207ENST00000520168 SLC25A42Q86VD7 318 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms