RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 TMEM14BQ9NUH8 114 aa9.19□□□□□ -0.94
PCDHGB4-201ENST00000519479 TRAV9-1A0A075B6T8 112 aa9.19□□□□□ -0.94
PCDHGB4-201ENST00000519479 TRAV30A0A087WSZ9 112 aa9.19□□□□□ -0.94
PCDHGB4-201ENST00000519479 IGHV2-26A0A0B4J1V2 119 aa9.19□□□□□ -0.94
PCDHGB4-201ENST00000519479 MMP23AO75900 390 aa9.19□□□□□ -0.94
PCDHGB4-201ENST00000519479 SCGB1C2P0DMR2 95 aa9.19□□□□□ -0.94
PCDHGB4-201ENST00000519479 TFPI2P48307 235 aa9.19□□□□□ -0.94
PCDHGB4-201ENST00000519479 Q5PR19 223 aa9.19□□□□□ -0.94
PCDHGB4-201ENST00000519479 LHFPL4Q7Z7J7 247 aa9.19□□□□□ -0.94
PCDHGB4-201ENST00000519479 LOXL3P58215 753 aa9.19□□□□□ -0.94
PCDHGB4-201ENST00000519479 ZNF672Q499Z4 452 aaPredicted RBP9.19□□□□□ -0.94
PCDHGB4-201ENST00000519479 SLC25A34Q6PIV7 304 aa9.19□□□□□ -0.94
PCDHGB4-201ENST00000519479 K7EM74 188 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 AMBPP02760 352 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 RNASE2P10153 161 aaKnown RBP9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 TMEM97Q5BJF2 176 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 GRAMD2BQ96HH9 432 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 IGKV3-7A0A075B6H7 116 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 TIMM23O14925 209 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 SERF1AO75920 110 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 FOXL1Q12952 345 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 PRSS8Q16651 343 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 SPRNQ5BIV9 151 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 TMEM208Q9BTX3 173 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 OSTCQ9NRP0 149 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 CFAP54Q96N23 3096 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 OR2J3O76001 311 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 CA1P00915 261 aaPredicted RBP9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 IGHV2-70P01814 119 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 FOXA3P55318 350 aaPredicted RBP9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 C3orf36Q3SXR2 165 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 CLEC5AQ9NY25 188 aa9.18□□□□□ -0.94
PCDHGB4-201ENST00000519479 E7EQL1 145 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 IGHV3-23P01764 117 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 AREGP15514 252 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 GNLYP22749 145 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 Q8TCH9 128 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 TNFRSF14Q92956 283 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 GPR82Q96P67 336 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 Q9H3A6 140 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 TMEM189A5PLL7 270 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 IGLV2-14P01704 120 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 RPL7P18124 248 aaKnown RBP9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 NIT1Q86X76 327 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 BEND2Q8NDZ0 799 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 NCOR1P1Q9H4R4 102 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 COL5A1P20908 1838 aaPredicted RBP9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 J3KRW8 73 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 NBR2O15453 112 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 PFN1P07737 140 aaKnown RBP9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 CDKN1AP38936 164 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 HSPB8Q9UJY1 196 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 LAMTOR2Q9Y2Q5 125 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 HBBP68871 147 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 EPDR1Q9UM22 224 aa9.17□□□□□ -0.94
PCDHGB4-201ENST00000519479 HIGD1CA8MV81 97 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 PDLIM4P50479 330 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 NEU1Q99519 415 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 CHODLQ9H9P2 273 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 ANKHD1Q8IWZ3 2542 aaKnown RBP9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 C9JCJ5 164 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 RAB37Q96AX2 223 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 RABAC1Q9UI14 185 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 UFC1Q9Y3C8 167 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 TBL2Q9Y4P3 447 aaKnown RBP9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 PIEZO2Q9H5I5 2752 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 IGHV3OR16-8A0A075B7F1 116 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 IGHV1-3A0A0C4DH29 117 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 IZUMO1RA6ND01 250 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 LY6HO94772 140 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 LINC00614P0C842 121 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 FABP2P12104 132 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 TCTAP57738 103 aa9.16□□□□□ -0.94
PCDHGB4-201ENST00000519479 LOC389332A0A1B0GUA5 103 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 ATP5J2P56134 94 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 PIMREGQ9BSJ6 248 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 C11orf1Q9H5F2 150 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 C21orf62Q9NYP8 219 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 A0A1B0GV72 72 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 PRSS1P07477 247 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 ERASQ7Z444 233 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 OR8A1Q8NGG7 326 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 ARPC1AQ92747 370 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 IGHV3OR16-13A0A075B7E8 117 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 IGHV3OR16-10A0A075B7F0 116 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 IGHV3-74A0A0B4J1X5 117 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 IGHV2-5P01817 119 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 COL8A2P25067 703 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 FAM19A2Q8N3H0 131 aa9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 RPP21Q9H633 154 aaKnown RBP9.15□□□□□ -0.94
PCDHGB4-201ENST00000519479 CGB1A6NKQ9 187 aa9.15□□□□□ -0.95
PCDHGB4-201ENST00000519479 FNDC10F2Z333 226 aa9.15□□□□□ -0.95
PCDHGB4-201ENST00000519479 SEM1Q6ZVN7 128 aa9.15□□□□□ -0.95
PCDHGB4-201ENST00000519479 LEPROTL1O95214 131 aa9.14□□□□□ -0.95
PCDHGB4-201ENST00000519479 Q1RN00 199 aa9.14□□□□□ -0.95
PCDHGB4-201ENST00000519479 ACTL10Q5JWF8 245 aa9.14□□□□□ -0.95
PCDHGB4-201ENST00000519479 FMC1Q96HJ9 113 aa9.14□□□□□ -0.95
PCDHGB4-201ENST00000519479 CCL19Q99731 98 aa9.14□□□□□ -0.95
PCDHGB4-201ENST00000519479 TEX36Q5VZQ5 186 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms