RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 Q5W150 140 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 C22orf39Q6P5X5 142 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 SOSTDC1Q6X4U4 206 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 TCTEX1D1Q8N7M0 179 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 BPIFB6Q8NFQ5 453 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 OR5A2Q8NGI9 324 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 OR5H6Q8NGV6 325 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 ZNF714Q96N38 554 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 C16orf95Q9H693 158 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 MYH6P13533 1939 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 ATG2AQ2TAZ0 1938 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 BCL9LQ86UU0 1499 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 RIMBP3CA6NJZ7 1639 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 RIMBP3BA6NNM3 1639 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 RIMBP3Q9UFD9 1639 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 KIF26AQ9ULI4 1882 aaPredicted RBP2.56□□□□□ -2
RNU4-60P-201ENST00000517239 KRTAP9-6A0A140TA67 174 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 FAM236AA0A1B0GUQ0 79 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 FAM236BA0A1B0GV22 79 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 KRTAP9-7A8MTY7 169 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 SNAPC5O75971 98 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 NCR2O95944 276 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 IGLV7-43P04211 117 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 TCRAP04437 139 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 IL4P05112 153 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 ZNF728P0DKX0 622 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 CSRP1P21291 193 aaKnown RBP2.56□□□□□ -2
RNU4-60P-201ENST00000517239 FGF7P21781 194 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 DIAPH2-AS1Q14236 149 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 FAM229BQ4G0N7 80 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 KHDC3LQ587J8 217 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 LCE5AQ5TCM9 118 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 EIF5AL1Q6IS14 154 aaKnown RBP2.56□□□□□ -2
RNU4-60P-201ENST00000517239 Q6ZQT7 251 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 WFDC11Q8NEX6 87 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 UBALD1Q8TB05 177 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 SMCR5Q8TEV8 140 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 DEDD2Q8WXF8 326 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 FGF13Q92913 245 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 PRELID3AQ96N28 172 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 PSMG3Q9BT73 122 aaPredicted RBP2.56□□□□□ -2
RNU4-60P-201ENST00000517239 GFRA4Q9GZZ7 299 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 SMDT1Q9H4I9 107 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 NIT2Q9NQR4 276 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 MDFICQ9P1T7 246 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 ARHGAP31Q2M1Z3 1444 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 DLC1Q96QB1 1528 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 ARHGEF28Q8N1W1 1705 aaKnown RBP2.56□□□□□ -2
RNU4-60P-201ENST00000517239 MYO5AQ9Y4I1 1855 aaKnown RBP2.56□□□□□ -2
RNU4-60P-201ENST00000517239 GREB1Q4ZG55 1949 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 MYH9P35579 1960 aaKnown RBP2.56□□□□□ -2
RNU4-60P-201ENST00000517239 THADAQ6YHU6 1953 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 SCN1AP35498 2009 aa2.56□□□□□ -2
RNU4-60P-201ENST00000517239 IGLV4-69A0A075B6H9 119 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 A0A0J9YW62 118 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 BBIP1A8MTZ0 92 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 A8MWV9 139 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 C3orf84H3BNL1 204 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 C19orf84I3L1E1 186 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 APODP05090 189 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 XCL1P47992 114 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 PPP3R1P63098 170 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 MYL5Q02045 173 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 NAIPQ13075 1403 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 ZNF181Q2M3W8 571 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 FAM135BQ49AJ0 1406 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 CCSMST1Q4G0I0 132 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 NOXRED1Q6NXP6 359 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 C7orf65Q6ZTY9 151 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 PHF5AQ7RTV0 110 aaKnown RBP2.55□□□□□ -2
RNU4-60P-201ENST00000517239 TRPM1Q7Z4N2 1603 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 LTBP4Q8N2S1 1624 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.55□□□□□ -2
RNU4-60P-201ENST00000517239 MAPK1IP1LQ8NDC0 245 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 OR5D16Q8NGK9 328 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 IMMP2LQ96T52 175 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 CST9LQ9H4G1 147 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 TMEM2Q9UHN6 1383 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 YEATS2Q9ULM3 1422 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 CDC42BPBQ9Y5S2 1711 aa2.55□□□□□ -2
RNU4-60P-201ENST00000517239 LCTP09848 1927 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 KIF13AQ9H1H9 1805 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 TTC37Q6PGP7 1564 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 MEGF6O75095 1541 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 TRBV27A0A0K0K1C4 114 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 LOC100130705A0A1B0GUX0 176 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 SPAARA0A1B0GVQ0 90 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 OR2T8A6NH00 312 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 RER1O15258 196 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 CREBL2O60519 120 aaPredicted RBP2.54□□□□□ -2
RNU4-60P-201ENST00000517239 WISP3O95389 354 aaPredicted RBP2.54□□□□□ -2
RNU4-60P-201ENST00000517239 MSMBP08118 114 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 AKAIN1P0CW23 69 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 HLA-EP13747 358 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 ZNF19P17023 458 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 RPL28P46779 137 aaKnown RBP2.54□□□□□ -2
RNU4-60P-201ENST00000517239 SUPT4H1P63272 117 aaKnown RBP2.54□□□□□ -2
RNU4-60P-201ENST00000517239 NDPQ00604 133 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 ZNF79Q15937 498 aa2.54□□□□□ -2
RNU4-60P-201ENST00000517239 LGALSLQ3ZCW2 172 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms