RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 COL8A2P25067 703 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 FKBP2P26885 142 aaKnown RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CRYBB3P26998 211 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 HLA-DMBP28068 263 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 RPL22P35268 128 aaKnown RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 FUSP35637 526 aaKnown RBP eCLIP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 RPS10P46783 165 aaKnown RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 XCL1P47992 114 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 GNG4P50150 75 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 INSL3P51460 131 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF80P51504 273 aaPredicted RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 DYNLT3P51808 116 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 AKR1D1P51857 326 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 FXYD7P58549 80 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 TSPEAR-AS2P59090 65 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 KRTAP12-2P59991 146 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 TMEM258P61165 79 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 MAXP61244 160 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 COPZ1P61923 177 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 RPL30P62888 115 aaKnown RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 HBBP68871 147 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 BTG2P78543 158 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 QRFPP83859 136 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 RHOGP84095 191 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CDK6Q00534 326 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 MEF2BQ02080 365 aaPredicted RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 PLGLB1Q02325 96 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 RPL18Q07020 188 aaKnown RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 FUT5Q11128 374 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 PSG7Q13046 419 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR8G1Q15617 311 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 NEDD8Q15843 81 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF141Q15928 474 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 MIAQ16674 131 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF181Q2M3W8 571 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 DEFB116Q30KQ4 102 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 TMEM155Q4W5P6 130 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 HSD17B12Q53GQ0 312 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 KHDC3LQ587J8 217 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 PABPC1L2AQ5JQF8 200 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 C10orf91Q5T1B1 145 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 LINC01545Q5VT33 79 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 EIF5AL1Q6IS14 154 aaKnown RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 NOXRED1Q6NXP6 359 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF322Q6U7Q0 402 aaPredicted RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 GLIPR1L1Q6UWM5 242 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZFP2Q6ZN57 461 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF705AQ6ZN79 300 aaPredicted RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 SDIM1Q6ZPB5 146 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 Q6ZR03 302 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 C7orf65Q6ZTY9 151 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 GTF2H5Q6ZYL4 71 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF767PQ75MW2 155 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 LINC00305Q7Z4B0 112 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 SPATA12Q7Z6I5 190 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 RPS19BP1Q86WX3 136 aaKnown RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 SAXO1Q8IYX7 474 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF101Q8IZC7 436 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ATOH7Q8N100 152 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 DYNAPQ8N1N2 210 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 C10orf111Q8N326 155 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 RPP25LQ8N5L8 163 aaKnown RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ACBD7Q8N6N7 88 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 SIGLECL1Q8N7X8 197 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 TMEM105Q8N8V8 129 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 DAND5Q8N907 189 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CNEP1R1Q8N9A8 125 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZFP62Q8NB50 900 aaPredicted RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 MORN4Q8NDC4 146 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR4B1Q8NGF8 309 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR8D4Q8NGM9 314 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR5C1Q8NGR4 320 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CLDND2Q8NHS1 167 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 MUC7Q8TAX7 377 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 UBALD1Q8TB05 177 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CIRBP-AS1Q8TBR5 109 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 KLF14Q8TD94 323 aaPredicted RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 SMCR5Q8TEV8 140 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 DCANP1Q8TF63 244 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 BRK1Q8WUW1 75 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 NAT14Q8WUY8 206 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 COPS9Q8WXC6 57 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 PP6455Q8WZ26 134 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 FGF13Q92913 245 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 RBPMSQ93062 196 aaKnown RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 RNASE6Q93091 150 aaKnown RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 UBE2WQ96B02 151 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ELSPBP1Q96BH3 223 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CARD19Q96LW7 228 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 PRELID3AQ96N28 172 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 AP1S3Q96PC3 154 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 RNF5Q99942 180 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 MIEN1Q9BRT3 115 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 GINS4Q9BRT9 223 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 SNRNP25Q9BV90 132 aaKnown RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 TSSK6Q9BXA6 273 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 NPCDR1Q9BY65 106 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 MRPL32Q9BYC8 188 aaKnown RBP0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms