RNA–Protein interactions for RNA: ENST00000514096.5

LIMCH1-219, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-219ENST00000514096 CCDC71LQ8N9Z2 235 aa6.4□□□□□ -1.39
LIMCH1-219ENST00000514096 OR11H1Q8NG94 326 aa6.4□□□□□ -1.39
LIMCH1-219ENST00000514096 OR10G4Q8NGN3 311 aa6.4□□□□□ -1.39
LIMCH1-219ENST00000514096 OR2G3Q8NGZ4 309 aa6.4□□□□□ -1.39
LIMCH1-219ENST00000514096 OR2T10Q8NGZ9 312 aa6.4□□□□□ -1.39
LIMCH1-219ENST00000514096 OR11H2Q8NH07 326 aa6.4□□□□□ -1.39
LIMCH1-219ENST00000514096 FAM110DQ8TAY7 271 aaPredicted RBP6.4□□□□□ -1.39
LIMCH1-219ENST00000514096 PP6455Q8WZ26 134 aa6.4□□□□□ -1.39
LIMCH1-219ENST00000514096 TMEM158Q8WZ71 300 aa6.4□□□□□ -1.39
LIMCH1-219ENST00000514096 SMIM7Q9BQ49 75 aa6.4□□□□□ -1.39
LIMCH1-219ENST00000514096 NPVFQ9HCQ7 196 aa6.4□□□□□ -1.39
LIMCH1-219ENST00000514096 PARP11Q9NR21 331 aa6.4□□□□□ -1.39
LIMCH1-219ENST00000514096 DNAJC9-AS1A6NH13 148 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 NUPR1O60356 82 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 IGLC2P0DOY2 106 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 IGLC3P0DOY3 106 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 NKX2-1P43699 371 aaPredicted RBP6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 PPP1R1AQ13522 171 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 ZNF345Q14585 488 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 ETDBQ3ZM63 59 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 LYRM7Q5U5X0 104 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 C16orf82Q7Z2V1 217 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 TMEM160Q9NX00 188 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 LSM2Q9Y333 95 aaKnown RBP6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 TRGV10A0A0A0MS01 117 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 TAS2R20P59543 309 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 NSUN5P1Q3KNT7 163 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 OR10P1Q8NGE3 313 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 C15orf40Q8WUR7 153 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 SGK494Q96LW2 274 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 IMMP2LQ96T52 175 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 SRD5A3Q9H8P0 318 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 GAGE12JA6NER3 117 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 PIN1P1O15428 100 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 GAGE7O76087 117 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 GAGE12FP0CL80 117 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 GAGE12GP0CL81 117 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 GAGE12IP0CL82 117 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 ATP5IP56385 69 aaPredicted RBP6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 CYCSP99999 105 aaKnown RBP6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 GAGE4Q13068 117 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 DIAPH2-AS1Q14236 149 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 TMEM155Q4W5P6 130 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 ZNF506Q5JVG8 444 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 RASL11AQ6T310 242 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 ZNF329Q86UD4 541 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 OSR2Q8N2R0 312 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 FAM19A2Q8N3H0 131 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 OR5D13Q8NGL4 314 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 OR13A1Q8NGR1 328 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 ZNF714Q96N38 554 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 GPHA2Q96T91 129 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 EHFQ9NZC4 300 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 ABRACLQ9P1F3 81 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 DNHD1Q96M86 4753 aa6.39□□□□□ -1.39
LIMCH1-219ENST00000514096 IRGMA1A4Y4 181 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 ZNF728P0DKX0 622 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 HIST1H1EP10412 219 aaKnown RBP6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 LINC00205P59089 165 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 ADAMTSL5Q6ZMM2 481 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 LCNL1Q6ZST4 164 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 Q6ZWC4 215 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 ADAD2Q8NCV1 583 aaKnown RBP6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 PTH2Q96A98 100 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 JPT1Q9UK76 154 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 A0A087X0K7 114 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 F2RL2O00254 374 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 SRSF10O75494 262 aaKnown RBP6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 TUSC2O75896 110 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 JTBO76095 146 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 RND3P61587 244 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 IAH1Q2TAA2 248 aaPredicted RBP6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 SYS1Q8N2H4 156 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 OR5AN1Q8NGI8 311 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 ST6GALNAC5Q9BVH7 336 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 NECAP2Q9NVZ3 263 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 TECRQ9NZ01 308 aaKnown RBP6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 ANXA10Q9UJ72 324 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 SERF1AO75920 110 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 CCL20P78556 96 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 SRSF9Q13242 221 aaKnown RBP eCLIP6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 ABHD12Q8N2K0 398 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 POC1AQ8NBT0 407 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 OR10AG1Q8NH19 301 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 OR4A16Q8NH70 328 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 PLPPR1Q8TBJ4 325 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 GATAD1Q8WUU5 269 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 TMEM59Q9BXS4 323 aa6.38□□□□□ -1.39
LIMCH1-219ENST00000514096 A0A1B0GW64 132 aa6.37□□□□□ -1.39
LIMCH1-219ENST00000514096 hADV38S2A0JD32 116 aa6.37□□□□□ -1.39
LIMCH1-219ENST00000514096 SOCS1O15524 211 aa6.37□□□□□ -1.39
LIMCH1-219ENST00000514096 FABP2P12104 132 aa6.37□□□□□ -1.39
LIMCH1-219ENST00000514096 SLC25A6P12236 298 aa6.37□□□□□ -1.39
LIMCH1-219ENST00000514096 TCF23Q7RTU1 214 aa6.37□□□□□ -1.39
LIMCH1-219ENST00000514096 SH2D6Q7Z4S9 175 aa6.37□□□□□ -1.39
LIMCH1-219ENST00000514096 RNF166Q96A37 237 aaPredicted RBP6.37□□□□□ -1.39
LIMCH1-219ENST00000514096 FGF20Q9NP95 211 aaPredicted RBP6.37□□□□□ -1.39
LIMCH1-219ENST00000514096 SF3B6Q9Y3B4 125 aaKnown RBP6.37□□□□□ -1.39
LIMCH1-219ENST00000514096 HIST1H1DP16402 221 aaKnown RBP6.37□□□□□ -1.39
LIMCH1-219ENST00000514096 GATA4P43694 442 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms