RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 SBF2Q86WG5 1849 aa6.05□□□□□ -1.44
UBE2D3-224ENST00000508474 SMIM27A0A1W2PRY6 76 aa6.05□□□□□ -1.44
UBE2D3-224ENST00000508474 C15orf62A8K5M9 175 aa6.05□□□□□ -1.44
UBE2D3-224ENST00000508474 PPP1R27Q86WC6 154 aa6.05□□□□□ -1.44
UBE2D3-224ENST00000508474 DOCK4Q8N1I0 1966 aa6.05□□□□□ -1.44
UBE2D3-224ENST00000508474 ASCC3Q8N3C0 2202 aaKnown RBP6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 PDCD11Q14690 1871 aaKnown RBP6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 UBR3Q6ZT12 1888 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 IGKV1-27A0A075B6S5 117 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 ZNHIT1O43257 154 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 Q6ZT83 130 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 RNASE8Q8TDE3 154 aaKnown RBP6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 TRGV9Q99603 122 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 V9GYV3 84 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 NKX2-8O15522 239 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 NTF4P34130 210 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 ZNF726P1Q15940 193 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 PMS2CLQ68D20 193 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 LYZL1Q6UWQ5 148 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 TRAV21A0A0B4J279 112 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 GGTLC3B5MD39 225 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 GLRXP35754 106 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 ZNF329Q86UD4 541 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 PRR7Q8TB68 274 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 ARRDC1-AS1Q9H2J1 176 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 PNRC2Q9NPJ4 139 aaKnown RBP6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 SDK1Q7Z5N4 2213 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 C9JAW5 83 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 EVI2AP22794 236 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 SNRPD3P62318 126 aaKnown RBP6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 FLVCR1-AS1Q8TAF5 88 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 RAX2Q96IS3 184 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 SELENOKQ9Y6D0 94 aa6.04□□□□□ -1.44
UBE2D3-224ENST00000508474 TRAV12-3A0A0B4J271 114 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 H3BMM0 161 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 GFRA3O60609 400 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 FCN3O75636 299 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 ZNF688P0C7X2 276 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 FHL1Q13642 323 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 DYNLRB2Q8TF09 96 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 UBE2WQ96B02 151 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 ZNF837Q96EG3 531 aaPredicted RBP6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 VGLL1Q99990 258 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 ZNF831Q5JPB2 1677 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 PAX9P55771 341 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 PSG7Q13046 419 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 C11orf52Q96A22 123 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 NABP1Q96AH0 204 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 C1QTNF4Q9BXJ3 329 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 SCN2AQ99250 2005 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 A0A0G2JRQ6 117 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 FOXF2Q12947 444 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 CSRP2Q16527 193 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 TMEM158Q8WZ71 300 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 DCTN5Q9BTE1 182 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 PLXNA1Q9UIW2 1896 aa6.03□□□□□ -1.44
UBE2D3-224ENST00000508474 KLF5Q13887 457 aaPredicted RBP6.02□□□□□ -1.44
UBE2D3-224ENST00000508474 UNQ6494/PRO21346Q6UXR6 183 aa6.02□□□□□ -1.44
UBE2D3-224ENST00000508474 FBXL15Q9H469 300 aa6.02□□□□□ -1.44
UBE2D3-224ENST00000508474 SPEM2Q0P670 501 aa6.02□□□□□ -1.45
UBE2D3-224ENST00000508474 Q6ZRM9 215 aa6.02□□□□□ -1.45
UBE2D3-224ENST00000508474 NEGR1Q7Z3B1 354 aa6.02□□□□□ -1.45
UBE2D3-224ENST00000508474 WIPF2Q8TF74 440 aaPredicted RBP6.02□□□□□ -1.45
UBE2D3-224ENST00000508474 SCRT1Q9BWW7 348 aa6.02□□□□□ -1.45
UBE2D3-224ENST00000508474 MTCL1Q9Y4B5 1905 aaKnown RBP6.02□□□□□ -1.45
UBE2D3-224ENST00000508474 EFEMP2O95967 443 aa6.02□□□□□ -1.45
UBE2D3-224ENST00000508474 VDAC2P45880 294 aaPredicted RBP6.02□□□□□ -1.45
UBE2D3-224ENST00000508474 OR11H6Q8NGC7 330 aa6.02□□□□□ -1.45
UBE2D3-224ENST00000508474 NCR2O95944 276 aa6.02□□□□□ -1.45
UBE2D3-224ENST00000508474 ZNF138P52744 262 aa6.02□□□□□ -1.45
UBE2D3-224ENST00000508474 Q86TA4 180 aa6.02□□□□□ -1.45
UBE2D3-224ENST00000508474 CEND1Q8N111 149 aa6.02□□□□□ -1.45
UBE2D3-224ENST00000508474 IGLV3-12A0A075B6K2 115 aa6.01□□□□□ -1.45
UBE2D3-224ENST00000508474 HAX1O00165 279 aa6.01□□□□□ -1.45
UBE2D3-224ENST00000508474 INAFM2P0DMQ5 153 aa6.01□□□□□ -1.45
UBE2D3-224ENST00000508474 IGKV3D-15A0A087WSY6 115 aa6.01□□□□□ -1.45
UBE2D3-224ENST00000508474 IGKV3-15P01624 115 aa6.01□□□□□ -1.45
UBE2D3-224ENST00000508474 DPM3Q9P2X0 92 aa6.01□□□□□ -1.45
UBE2D3-224ENST00000508474 PF4V1P10720 104 aa6.01□□□□□ -1.45
UBE2D3-224ENST00000508474 RRN3P1Q2M238 152 aa6.01□□□□□ -1.45
UBE2D3-224ENST00000508474 FAM90A27PA6NNH2 459 aa6.01□□□□□ -1.45
UBE2D3-224ENST00000508474 SH2D1AO60880 128 aa6.01□□□□□ -1.45
UBE2D3-224ENST00000508474 TFF2Q03403 129 aa6.01□□□□□ -1.45
UBE2D3-224ENST00000508474 UTF1Q5T230 341 aa6.01□□□□□ -1.45
UBE2D3-224ENST00000508474 FOXL2NBQ6ZUU3 175 aa6.01□□□□□ -1.45
UBE2D3-224ENST00000508474 F5P12259 2224 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 POU2AF1Q16633 256 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 PPP1R32Q7Z5V6 425 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 MCRIP2Q9BUT9 160 aaKnown RBP6□□□□□ -1.45
UBE2D3-224ENST00000508474 SIP14410 1827 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 CECR9P0C854 216 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 SPACA3Q8IXA5 215 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 TMEM167AQ8TBQ9 72 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 FAM57AQ8TBR7 257 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 C1orf147Q96MC9 270 aaPredicted RBP6□□□□□ -1.45
UBE2D3-224ENST00000508474 MYO9BQ13459 2157 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 KNL1Q8NG31 2342 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 SIPA1L1O43166 1804 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 OVOL1O14753 267 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 TRACP01848 142 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms