RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 CUL9Q8IWT3 2517 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 A0A1W2PRS3 328 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 C19orf71A6NCJ1 209 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 IGKV1D-33P01593 117 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 IGKV1-33P01594 117 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 C9orf153Q5TBE3 101 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 Q6P435 159 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 UNQ5815/PRO19632Q6UWF5 114 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 TTC9CQ8N5M4 171 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 SUMF2Q8NBJ7 301 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 CAMK2N2Q96S95 79 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 DSCR8Q96T75 97 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 GABARAPL1Q9H0R8 117 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 ARID1BQ8NFD5 2236 aaPredicted RBP3.6□□□□□ -1.83
NIPBL-204ENST00000504430 TRAV1-1A0A0B4J248 108 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 ZNF286BP0CG31 522 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 T-ENOLP0DO92 83 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 TDRG1Q3Y452 100 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 MIC13Q5XKP0 118 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 PHF5AQ7RTV0 110 aaKnown RBP3.6□□□□□ -1.83
NIPBL-204ENST00000504430 C10orf105Q8TEF2 133 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 SLC25A46Q96AG3 418 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 C2orf50Q96LR7 162 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 SNRNP25Q9BV90 132 aaKnown RBP3.6□□□□□ -1.83
NIPBL-204ENST00000504430 SIGLEC1Q9BZZ2 1709 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 IGHV1OR15-9A0A0B4J2B8 117 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 A0A1B0GVX0 72 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 IRGMA1A4Y4 181 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 CD7P09564 240 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 MORN3Q6PF18 240 aaPredicted RBP3.6□□□□□ -1.83
NIPBL-204ENST00000504430 PRELID3AQ96N28 172 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 RERGLQ9H628 205 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 CEP170Q5SW79 1584 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 COL5A2P05997 1499 aaPredicted RBP3.6□□□□□ -1.83
NIPBL-204ENST00000504430 SOCS1O15524 211 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 S100A4P26447 101 aaKnown RBP3.6□□□□□ -1.83
NIPBL-204ENST00000504430 CCL20P78556 96 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 SPANXN3Q5MJ09 141 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 ZFP2Q6ZN57 461 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 IER3IP1Q9Y5U9 82 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 ERICH3Q5RHP9 1530 aa3.6□□□□□ -1.83
NIPBL-204ENST00000504430 NACAE9PAV3 2078 aa3.59□□□□□ -1.83
NIPBL-204ENST00000504430 TRBV27A0A0K0K1C4 114 aa3.59□□□□□ -1.83
NIPBL-204ENST00000504430 KLF18A0A0U1RQI7 1052 aa3.59□□□□□ -1.83
NIPBL-204ENST00000504430 PYYP10082 97 aa3.59□□□□□ -1.83
NIPBL-204ENST00000504430 CCL3P10147 92 aa3.59□□□□□ -1.83
NIPBL-204ENST00000504430 HLA-DRB4P13762 266 aa3.59□□□□□ -1.83
NIPBL-204ENST00000504430 Q6ZUT4 128 aa3.59□□□□□ -1.83
NIPBL-204ENST00000504430 TEN1Q86WV5 123 aa3.59□□□□□ -1.83
NIPBL-204ENST00000504430 TXNL4BQ9NX01 149 aaKnown RBP3.59□□□□□ -1.83
NIPBL-204ENST00000504430 HLA-DRB4X5D2U9 266 aa3.59□□□□□ -1.83
NIPBL-204ENST00000504430 KDM5CP41229 1560 aa3.59□□□□□ -1.83
NIPBL-204ENST00000504430 COLCA2A8K830 154 aa3.59□□□□□ -1.83
NIPBL-204ENST00000504430 NCR2O95944 276 aa3.59□□□□□ -1.83
NIPBL-204ENST00000504430 INSP01308 110 aa3.59□□□□□ -1.83
NIPBL-204ENST00000504430 APCSP02743 223 aa3.59□□□□□ -1.83
NIPBL-204ENST00000504430 MRPL51Q4U2R6 128 aaKnown RBP3.59□□□□□ -1.83
NIPBL-204ENST00000504430 CHCHD2Q9Y6H1 151 aaPredicted RBP3.59□□□□□ -1.83
NIPBL-204ENST00000504430 CEP162Q5TB80 1403 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 IGHV5-10-1A0A0J9YXX1 117 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 AMTNQ6UX39 209 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 H2AFVQ71UI9 128 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 ATOH7Q8N100 152 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 ATG5Q9H1Y0 275 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 KIAA1549Q9HCM3 1950 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 SMIM31A0A1B0GVY4 71 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 QRFPP83859 136 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 FAM229BQ4G0N7 80 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 ZFAND2AQ8N6M9 145 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 AGPAT4-IT1Q9H0P7 198 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 NPVFQ9HCQ7 196 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 OSTCQ9NRP0 149 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 ATAD5Q96QE3 1844 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 BCL9LQ86UU0 1499 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 A2ML1A8K2U0 1454 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 IGHV3-43A0A0B4J1X8 118 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 ZFP92A6NM28 416 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 IGKV2-30P06310 120 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 IGLC1P0CG04 106 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 ZNF90Q03938 601 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 FAM78AQ5JUQ0 283 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 CD177Q8N6Q3 437 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 RHOXF1Q8NHV9 184 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 TYMSOSQ8TAI1 123 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 LCN9Q8WX39 176 aa3.58□□□□□ -1.84
NIPBL-204ENST00000504430 SNCAP37840 140 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 NANOS3P60323 173 aaKnown RBP3.57□□□□□ -1.84
NIPBL-204ENST00000504430 TMEM258P61165 79 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 KCNRGQ8N5I3 272 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 ZNF525Q8N782 197 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 ZNF714Q96N38 554 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 BCL2L10Q9HD36 194 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 ZNF222Q9UK12 451 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 OBSL1O75147 1896 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 MYOM3Q5VTT5 1437 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 IGHV3-49A0A0A0MS15 119 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 RER1O15258 196 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 CCL5P13501 91 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 HOXC5Q00444 222 aa3.57□□□□□ -1.84
NIPBL-204ENST00000504430 RPL18Q07020 188 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms